FFCP PHASE1:Hg19::chr5:110559941..110559952,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=814 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1464 | |||
|TSSclassifier=strong | |||
|UniProt=Q16566 | |||
|association_with_transcript=0bp_to_NM_001744_5end | |||
|cluster_id=chr5:110559941..110559952,+ | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_4_at_CAMK4_5end | |||
|id=chr5:110559941..110559952,+ | |||
|ontology_enrichment_celltype=CL:0000084!4.20e-19!25;CL:0000827!4.20e-19!25;CL:0000542!3.36e-17!53;CL:0000051!3.36e-17!53;CL:0000838!1.03e-16!52;CL:0000791!6.28e-15!18;CL:0000789!6.28e-15!18;CL:0002420!6.28e-15!18;CL:0002419!6.28e-15!18;CL:0000790!6.28e-15!18;CL:0000625!2.14e-10!11;CL:0000624!1.90e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.39e-25;18!CL:0000789;1.39e-25;18!CL:0002419;1.39e-25;18!CL:0000084;9.58e-25;25!CL:0000625;5.95e-16;11!CL:0000624;2.85e-13;6!CL:0000542;2.90e-08;53!CL:0000898;2.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.35e-26,18;CL:0000789,7.35e-26,18;CL:0002420,7.35e-26,18;CL:0002419,7.35e-26,18;CL:0000790,7.35e-26,18;CL:0000084,6.24e-25,25;CL:0000827,6.24e-25,25;CL:0000625,3.53e-16,11;CL:0000838,3.79e-14,52;CL:0000542,9.17e-14,53;CL:0000051,9.17e-14,53;CL:0000624,2.50e-13,6;CL:0000898,2.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-25;18!UBERON:0006215;2.80e-08;3!CL:0000051;2.90e-08;53!UBERON:0006601;3.39e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.75e-31!57;UBERON:0005068!1.75e-31!57;UBERON:0006241!1.75e-31!57;UBERON:0007135!1.75e-31!57;UBERON:0001017!7.52e-30!82;UBERON:0002780!8.55e-29!41;UBERON:0001890!8.55e-29!41;UBERON:0006240!8.55e-29!41;UBERON:0002616!1.45e-28!59;UBERON:0005743!1.93e-28!86;UBERON:0000955!3.52e-28!69;UBERON:0006238!3.52e-28!69;UBERON:0000073!4.79e-28!94;UBERON:0001016!4.79e-28!94;UBERON:0003080!9.42e-28!42;UBERON:0007023!1.59e-27!115;UBERON:0001869!2.14e-25!32;UBERON:0001893!7.92e-25!34;UBERON:0002020!2.18e-24!34;UBERON:0003528!2.18e-24!34;UBERON:0002791!8.03e-24!33;UBERON:0003075!2.52e-23!86;UBERON:0007284!2.52e-23!86;UBERON:0003056!4.92e-22!61;UBERON:0002346!2.27e-21!90;UBERON:0002619!1.58e-20!22;UBERON:0001950!5.76e-19!20;UBERON:0000956!2.26e-18!25;UBERON:0000203!2.26e-18!25;UBERON:0000153!3.49e-16!129;UBERON:0007811!3.49e-16!129;UBERON:0000033!1.16e-14!123;UBERON:0004121!9.79e-13!169;UBERON:0000924!6.26e-12!173;UBERON:0006601!6.26e-12!173;UBERON:0001871!5.18e-09!7;UBERON:0002420!3.15e-08!9;UBERON:0007245!3.15e-08!9;UBERON:0010009!3.15e-08!9;UBERON:0010011!3.15e-08!9;UBERON:0000454!3.15e-08!9;UBERON:0002308!1.88e-07!9;UBERON:0000125!1.88e-07!9;UBERON:0000200!3.17e-07!6;UBERON:0000178!7.38e-07!15;UBERON:0000179!7.38e-07!15;UBERON:0000463!7.38e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.16e-44;32!UBERON:0002791;3.35e-41;32!UBERON:0002619;3.52e-40;22!UBERON:0001893;4.47e-39;34!UBERON:0001950;6.34e-37;20!UBERON:0003528;8.66e-37;34!UBERON:0002020;8.66e-37;34!UBERON:0002780;1.28e-36;41!UBERON:0001890;1.28e-36;41!UBERON:0000956;9.59e-35;25!UBERON:0000203;9.59e-35;25!UBERON:0000073;4.12e-27;53!UBERON:0002616;4.12e-27;53!UBERON:0000955;1.76e-19;68!UBERON:0001017;9.04e-18;75!UBERON:0002420;2.00e-15;9!UBERON:0007245;2.00e-15;9!UBERON:0010009;2.00e-15;9!UBERON:0010011;2.00e-15;9!UBERON:0000454;2.00e-15;9!UBERON:0001016;6.69e-15;83!UBERON:0001871;9.60e-15;6!UBERON:0000200;9.43e-13;6!UBERON:0009663;1.03e-11;7!UBERON:0002021;2.09e-11;5!UBERON:0000349;9.59e-11;5!UBERON:0000369;2.39e-10;4!UBERON:0002435;2.39e-10;4!UBERON:0000204;2.39e-10;4!UBERON:0000125;6.80e-09;9!UBERON:0002308;6.80e-09;9!UBERON:0002784;1.24e-08;4!UBERON:0007023;1.29e-08;114!UBERON:0005383;3.43e-08;3!UBERON:0005382;3.43e-08;3!UBERON:0001894;1.56e-07;7!UBERON:0001872;5.16e-07;5!UBERON:0001870;5.90e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.53e-52,53;UBERON:0002616,8.53e-52,53;UBERON:0002780,1.07e-51,41;UBERON:0001890,1.07e-51,41;UBERON:0003080,1.07e-51,41;UBERON:0006240,1.07e-51,41;UBERON:0001869,7.65e-49,32;UBERON:0001049,2.06e-48,56;UBERON:0005068,2.06e-48,56;UBERON:0006241,2.06e-48,56;UBERON:0007135,2.06e-48,56;UBERON:0001893,1.64e-45,34;UBERON:0002791,4.20e-45,32;UBERON:0003528,5.24e-42,34;UBERON:0002020,5.24e-42,34;UBERON:0000955,6.92e-42,68;UBERON:0006238,6.92e-42,68;UBERON:0002619,3.64e-40,22;UBERON:0001016,2.40e-39,89;UBERON:0001017,3.81e-39,81;UBERON:0001950,5.06e-37,20;UBERON:0003056,1.74e-35,61;UBERON:0000956,9.90e-35,25;UBERON:0000203,9.90e-35,25;UBERON:0003075,9.37e-33,82;UBERON:0007284,9.37e-33,82;UBERON:0002346,1.13e-30,86;UBERON:0007023,9.60e-25,114;UBERON:0010371,2.62e-23,104;UBERON:0010314,6.03e-17,132;UBERON:0004121,4.30e-16,171;UBERON:0000924,4.30e-16,171;UBERON:0006601,4.30e-16,171;UBERON:0002420,1.85e-15,9;UBERON:0007245,1.85e-15,9;UBERON:0010009,1.85e-15,9;UBERON:0010011,1.85e-15,9;UBERON:0000454,1.85e-15,9;UBERON:0001871,1.11e-14,6;UBERON:0000200,6.88e-13,6;UBERON:0009663,9.69e-12,7;UBERON:0011216,1.59e-11,223;UBERON:0002021,2.04e-11,5;UBERON:0000349,1.24e-10,5;UBERON:0000369,2.40e-10,4;UBERON:0002435,2.40e-10,4;UBERON:0000204,2.40e-10,4;UBERON:0010082,2.40e-10,4;UBERON:0000125,6.51e-09,9;UBERON:0002308,6.51e-09,9;UBERON:0002784,9.38e-09,4;UBERON:0005383,3.45e-08,3;UBERON:0005382,3.45e-08,3;UBERON:0001894,1.28e-07,7;UBERON:0006222,1.28e-07,7;UBERON:0001870,4.52e-07,3;UBERON:0001872,4.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.764134057479513,0.656804715599566,1.02324015707783,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,1.08505435357926,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,4.91774425284583,4.71612915298998,5.34563897398724,1.17030546773475,2.60737813306872,2.8406868344084,1.94826728407911,2.33961959458865,3.53527088969805,2.87994062958707,2.70803863765016,0.640456598628376,1.30059347559878,3.12432018746985,2.21080014228679,2.31842468588042,3.26230438956533,5.61835738988397,6.27213142829861,2.49280553934646,7.66440987203842,4.46715679127419,2.78321661221453,2.86708872891687,1.95325036156926,1.90090408889675,1.80690142893327,2.55973222308837,1.24930726552346,3.31488152861624,2.46338399076314,2.21767417547206,1.33720097891754,0.724122019413995,0,0,0,0,0,0,0,0,1.03988298880475,1.33037638477538,0.87834785693126,0.982343066232845,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0,0.171567810298526,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.2937654491571,0.898401253958239,0,1.30139853857622,0,1.84267891867784,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,2.89475236572042,0.215714200818617,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0,0.308097234229289,0,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,1.90585420366231,0.822724546172388,2.59389324477087,1.62009431171434,0.79312517629427,0,0,0,0.371606350251437,0,2.77453189058815,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,6.95903353436409,2.53204949538923,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,0.369254416383208,0,0,0,0,0,0,0,3.87733098438087,7.0503754603007,0,0,0,0,0,0,0,1.03423011972439,0.583209226766509,0.347249989866585,25.6865001886013,15.4363441440522,30.5163472634166,29.524662401637,30.4414047522154,6.14279112031123,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0.247127877893006,0.417687798021821,0.471807930864739,0,10.5419000576403,0,0.19566461893209,0,0,1.20990716048664,3.0607276163049,0.31593289814244,0.751617097072463,0.207376382794494,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.90392296312213,0.137041924646751,0,11.6491864558817,0,0.400794101257669,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,7.80546375322726,1.50595916781192,0,0,0.788662062837943,0,0,0,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0.169346664131569,2.38568906942791,1.22583065500418,0.321506296930038,0.550157746388935,0,0,0,7.65444413891111,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0.106787412567695,0,0,0.992332043623902,0.592834895693833,0.243585196761792,0,0,0,0,0,0.314108192500469,1.77213635993397,5.61320818549031,2.754200475543,0,1.77486482458964,0.434674820589684,0,0.124980407962107,0,0.285465333544967,0,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,3.45646090379327,0,0,0,0,0,0,2.59983614611409,0.106691729694141,1.37771983728653,0,0,0.139879507719444,0,1.02315497042921,2.47997066212368,0,1.52893493468819,0,0,0,0,0,0,0,0,0,13.6808249455459,12.7526918693026,2.39450788585727,10.2558182120378,2.7727886584389,6.63909623656492,2.09918339321406,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,6.48360812336589,2.34323429584154,1.86018116851066,4.88301738493082,0,0,0,0,0,1.60710550763486,3.02655349996942,0,0.227662191351298,0,0.115233987555779,0,1.76721305739762,5.52491297927932,0,0,0.156986185701028,24.5100320268963,0,1.82631744101899,0,0,0.214429632529969,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0.467878926924211,0,0,0.22589216407792,0.109940516745429,0,0.385870790539723,0.218559560503957,0,0,0,0.196308467114945,0,0,0.339854229375634,0.187967835959707,0.45120521581504,0.399764623699716,0,0,0,0,0,0,0,8.63491925424617,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,3.31667775783512,2.99955687999496,0.213233981900981,0,2.38978966393223,3.41410928627218,0.112131862580613,0,0.202117188958219,0,0,0.404112318087525,0.143444410785353,0,0.162806537221949,0.106727345877715,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |||
|short_description=p4@CAMK4 | |||
}} |
Latest revision as of 17:08, 19 September 2015
Short description: | p4@CAMK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAMK4_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_NM_001744_5end |
EntrezGene: | CAMK4 |
HGNC: | 1464 |
UniProt: | Q16566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.35e-26 | 18 |
alpha-beta T cell | 7.35e-26 | 18 |
immature T cell | 7.35e-26 | 18 |
mature T cell | 7.35e-26 | 18 |
immature alpha-beta T cell | 7.35e-26 | 18 |
T cell | 6.24e-25 | 25 |
pro-T cell | 6.24e-25 | 25 |
CD8-positive, alpha-beta T cell | 3.53e-16 | 11 |
lymphoid lineage restricted progenitor cell | 3.79e-14 | 52 |
lymphocyte | 9.17e-14 | 53 |
common lymphoid progenitor | 9.17e-14 | 53 |
CD4-positive, alpha-beta T cell | 2.50e-13 | 6 |
naive T cell | 2.02e-07 | 3 |