FFCP PHASE1:Mm9::chr17:70318446..70318465,+: Difference between revisions
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{{FFCP|EntrezGene=224997|HGNC=|MCL_coexpression_id=93|UniProt=Q9D415|association_with_transcript=33bp_to_ENSMUST00000133983_5end|description=CAGE_peak_4_at_Dlgap1_5end|id=chr17:70318446..70318465,+|ontology_enrichment_celltype=CL:0000540!9.16e-18!33;CL:0000047!9.16e-18!33;CL:0000031!9.16e-18!33;CL:0000404!9.16e-18!33;CL:0000117!3.43e-16!23;CL:0000337!3.43e-16!23;CL:0000393!5.76e-13!39;CL:0000211!5.76e-13!39;CL:0002319!3.51e-11!43;CL:0000221!1.21e-10!44;CL:0000133!1.21e-10!44;CL:0000055!5.98e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.32e-25,23;CL:0000337,5.32e-25,23;CL:0000540,1.17e-19,33;CL:0000047,1.17e-19,33;CL:0000031,1.17e-19,33;CL:0000404,1.17e-19,33;CL:0000393,2.06e-15,39;CL:0000211,2.06e-15,39;CL:0002319,2.91e-13,43;CL:0000221,8.67e-13,44;CL:0000133,8.67e-13,44;CL:0002609,4.71e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.44e-26!73;UBERON:0005743!7.44e-26!73;UBERON:0000073!3.27e-25!75;UBERON:0001016!3.27e-25!75;UBERON:0002346!4.16e-25!71;UBERON:0003075!4.16e-25!71;UBERON:0007284!4.16e-25!71;UBERON:0004121!3.32e-23!102;UBERON:0000924!3.32e-23!102;UBERON:0006601!3.32e-23!102;UBERON:0002020!2.30e-22!34;UBERON:0001049!4.37e-21!52;UBERON:0005068!4.37e-21!52;UBERON:0006241!4.37e-21!52;UBERON:0007135!4.37e-21!52;UBERON:0000033!5.09e-21!63;UBERON:0000955!1.53e-19!50;UBERON:0006238!1.53e-19!50;UBERON:0003056!1.06e-18!49;UBERON:0002616!1.12e-18!49;UBERON:0002791!3.21e-18!29;UBERON:0003528!3.21e-18!29;UBERON:0001893!3.21e-18!29;UBERON:0003080!2.58e-15!40;UBERON:0002780!1.11e-14!39;UBERON:0001890!1.11e-14!39;UBERON:0006240!1.11e-14!39;UBERON:0000956!3.15e-13!21;UBERON:0001869!3.15e-13!21;UBERON:0000203!3.15e-13!21;UBERON:0002619!1.25e-10!17;UBERON:0007811!4.46e-10!86;UBERON:0002021!1.11e-09!10;UBERON:0000411!1.11e-09!10;UBERON:0001950!1.11e-09!10;UBERON:0000153!1.07e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.03e-37,54;UBERON:0001017,6.14e-36,73;UBERON:0002020,7.12e-36,34;UBERON:0001016,1.43e-34,75;UBERON:0001049,3.38e-34,52;UBERON:0005068,3.38e-34,52;UBERON:0006241,3.38e-34,52;UBERON:0007135,3.38e-34,52;UBERON:0002346,9.78e-32,64;UBERON:0003075,9.78e-32,64;UBERON:0007284,9.78e-32,64;UBERON:0004121,2.05e-29,95;UBERON:0000924,2.05e-29,95;UBERON:0006601,2.05e-29,95;UBERON:0003528,3.57e-29,29;UBERON:0002791,3.57e-29,29;UBERON:0001893,3.57e-29,29;UBERON:0000955,3.91e-28,47;UBERON:0006238,3.91e-28,47;UBERON:0002616,9.12e-27,46;UBERON:0010371,4.11e-26,73;UBERON:0003080,4.02e-24,40;UBERON:0003056,6.19e-24,49;UBERON:0002780,4.29e-23,39;UBERON:0001890,4.29e-23,39;UBERON:0006240,4.29e-23,39;UBERON:0000956,3.91e-21,21;UBERON:0001869,3.91e-21,21;UBERON:0000203,3.91e-21,21;UBERON:0010314,6.42e-18,92;UBERON:0002619,5.94e-17,17;UBERON:0002021,1.47e-14,10;UBERON:0000411,1.47e-14,10;UBERON:0001950,1.47e-14,10;UBERON:0003076,2.69e-10,12;UBERON:0003057,2.69e-10,12;UBERON:0002420,5.12e-09,8;UBERON:0007245,5.12e-09,8;UBERON:0010009,5.12e-09,8;UBERON:0010011,5.12e-09,8;UBERON:0000454,5.12e-09,8;UBERON:0000025,5.93e-09,114;UBERON:0002240,9.71e-09,6;UBERON:0005174,9.71e-09,6;UBERON:0001137,9.71e-09,6;UBERON:0001948,9.53e-08,5;UBERON:0002315,9.53e-08,5;UBERON:0004111,1.19e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,5.81890077199236,1.26766280701236,0,0,0,0,0,0,0,3.31806759387129,3.51015439662396,2.94454945891935,7.9982275633065,10.3808214247258,5.38959516545798,3.73797336971122,2.75765635983006,6.60695285996332,9.57655035638908,7.52672012955593,2.76961204233407,2.74462930807229,1.56274011167028,4.74611098302348,7.87867654044352,7.18151764551008,13.5529149317887,11.9592211871246,8.76077395378913,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.376999773989026,0,0,0,0.161766849947409,0,0,0,8.19786231632332,9.21565509979202,0,0,0,0,4.19413790333504,3.66000482254901,4.02093926761166,14.0797699355744,11.2514801225345,7.2725815595846,7.46309810111685,0.203678727700633,0,0,0.631325567659422,0.390361328888111,0.689706313300419,0.180062129805349,0.30140963567143,3.40182495756639,2.3060469651273,4.02917415606834,2.58703370739016,0,0,0.351902248327898,0.43839146485515,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0334858336943,6.79170441703277,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.05046120976805,3.98519734413491,0,0.252470927204373,0.94652465824877,0.390438744296638,0.861693590931196,0.716906393857656,0.891194696329576,0,1.21443210502468,1.75353514746787,1.58115111178609,46.2702695647402,0,0,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.913394847343798,0,0,0,0.16488625294148,0,0,0,0,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0.448549638131936,0.496375471371293,0.194451188344048,0.129159823477731,0.337912250981556,0,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,14.6835479080437,15.651058041244,13.1765968091061,12.2015759464018,15.7568979547248,9.82012066606611,12.8254275044043,10.8077088773813,9.06284817968409,9.31968561153276,0.103787347584177,0.798049746802062,0.512200817262403,0.972426868273176,0.419226325255965,1.10306105070008,0.888986911206461,1.23621034343337,1.60459604795908,0.505394423527595,2.28131369901216,0.943131706930381,1.49826411951812,1.53660365771686,1.32101578597911,0.952587382566147,0.811190281613988,0.578727661391115,2.88460130562315,1.61918812147837,0.685738504770831,0.532427418478012,1.43061713968393,0.726732083161643,1.59985946706062,1.01537529470012,0.548783918618318,0.789209134313529,1.62964936615034,1.12228454331548,1.42362021749009,1.18205378850676,0.818462086339379,1.39443157067369,1.54325288784913,2.49810577937946,1.16965804222704,0.859484216193193,0.382576664137687,0.220591419119515,0|short_description=p4@Dlgap1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224997 | |||
|HGNC= | |||
|MCL_coexpression_id=93 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D415 | |||
|association_with_transcript=33bp_to_ENSMUST00000133983_5end | |||
|cluster_id=chr17:70318446..70318465,+ | |||
|description=CAGE_peak_4_at_Dlgap1_5end | |||
|id=chr17:70318446..70318465,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.16e-18!33;CL:0000047!9.16e-18!33;CL:0000031!9.16e-18!33;CL:0000404!9.16e-18!33;CL:0000117!3.43e-16!23;CL:0000337!3.43e-16!23;CL:0000393!5.76e-13!39;CL:0000211!5.76e-13!39;CL:0002319!3.51e-11!43;CL:0000221!1.21e-10!44;CL:0000133!1.21e-10!44;CL:0000055!5.98e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.32e-25,23;CL:0000337,5.32e-25,23;CL:0000540,1.17e-19,33;CL:0000047,1.17e-19,33;CL:0000031,1.17e-19,33;CL:0000404,1.17e-19,33;CL:0000393,2.06e-15,39;CL:0000211,2.06e-15,39;CL:0002319,2.91e-13,43;CL:0000221,8.67e-13,44;CL:0000133,8.67e-13,44;CL:0002609,4.71e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.44e-26!73;UBERON:0005743!7.44e-26!73;UBERON:0000073!3.27e-25!75;UBERON:0001016!3.27e-25!75;UBERON:0002346!4.16e-25!71;UBERON:0003075!4.16e-25!71;UBERON:0007284!4.16e-25!71;UBERON:0004121!3.32e-23!102;UBERON:0000924!3.32e-23!102;UBERON:0006601!3.32e-23!102;UBERON:0002020!2.30e-22!34;UBERON:0001049!4.37e-21!52;UBERON:0005068!4.37e-21!52;UBERON:0006241!4.37e-21!52;UBERON:0007135!4.37e-21!52;UBERON:0000033!5.09e-21!63;UBERON:0000955!1.53e-19!50;UBERON:0006238!1.53e-19!50;UBERON:0003056!1.06e-18!49;UBERON:0002616!1.12e-18!49;UBERON:0002791!3.21e-18!29;UBERON:0003528!3.21e-18!29;UBERON:0001893!3.21e-18!29;UBERON:0003080!2.58e-15!40;UBERON:0002780!1.11e-14!39;UBERON:0001890!1.11e-14!39;UBERON:0006240!1.11e-14!39;UBERON:0000956!3.15e-13!21;UBERON:0001869!3.15e-13!21;UBERON:0000203!3.15e-13!21;UBERON:0002619!1.25e-10!17;UBERON:0007811!4.46e-10!86;UBERON:0002021!1.11e-09!10;UBERON:0000411!1.11e-09!10;UBERON:0001950!1.11e-09!10;UBERON:0000153!1.07e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.03e-37,54;UBERON:0001017,6.14e-36,73;UBERON:0002020,7.12e-36,34;UBERON:0001016,1.43e-34,75;UBERON:0001049,3.38e-34,52;UBERON:0005068,3.38e-34,52;UBERON:0006241,3.38e-34,52;UBERON:0007135,3.38e-34,52;UBERON:0002346,9.78e-32,64;UBERON:0003075,9.78e-32,64;UBERON:0007284,9.78e-32,64;UBERON:0004121,2.05e-29,95;UBERON:0000924,2.05e-29,95;UBERON:0006601,2.05e-29,95;UBERON:0003528,3.57e-29,29;UBERON:0002791,3.57e-29,29;UBERON:0001893,3.57e-29,29;UBERON:0000955,3.91e-28,47;UBERON:0006238,3.91e-28,47;UBERON:0002616,9.12e-27,46;UBERON:0010371,4.11e-26,73;UBERON:0003080,4.02e-24,40;UBERON:0003056,6.19e-24,49;UBERON:0002780,4.29e-23,39;UBERON:0001890,4.29e-23,39;UBERON:0006240,4.29e-23,39;UBERON:0000956,3.91e-21,21;UBERON:0001869,3.91e-21,21;UBERON:0000203,3.91e-21,21;UBERON:0010314,6.42e-18,92;UBERON:0002619,5.94e-17,17;UBERON:0002021,1.47e-14,10;UBERON:0000411,1.47e-14,10;UBERON:0001950,1.47e-14,10;UBERON:0003076,2.69e-10,12;UBERON:0003057,2.69e-10,12;UBERON:0002420,5.12e-09,8;UBERON:0007245,5.12e-09,8;UBERON:0010009,5.12e-09,8;UBERON:0010011,5.12e-09,8;UBERON:0000454,5.12e-09,8;UBERON:0000025,5.93e-09,114;UBERON:0002240,9.71e-09,6;UBERON:0005174,9.71e-09,6;UBERON:0001137,9.71e-09,6;UBERON:0001948,9.53e-08,5;UBERON:0002315,9.53e-08,5;UBERON:0004111,1.19e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,5.81890077199236,1.26766280701236,0,0,0,0,0,0,0,3.31806759387129,3.51015439662396,2.94454945891935,7.9982275633065,10.3808214247258,5.38959516545798,3.73797336971122,2.75765635983006,6.60695285996332,9.57655035638908,7.52672012955593,2.76961204233407,2.74462930807229,1.56274011167028,4.74611098302348,7.87867654044352,7.18151764551008,13.5529149317887,11.9592211871246,8.76077395378913,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.376999773989026,0,0,0,0.161766849947409,0,0,0,8.19786231632332,9.21565509979202,0,0,0,0,4.19413790333504,3.66000482254901,4.02093926761166,14.0797699355744,11.2514801225345,7.2725815595846,7.46309810111685,0.203678727700633,0,0,0.631325567659422,0.390361328888111,0.689706313300419,0.180062129805349,0.30140963567143,3.40182495756639,2.3060469651273,4.02917415606834,2.58703370739016,0,0,0.351902248327898,0.43839146485515,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0334858336943,6.79170441703277,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.05046120976805,3.98519734413491,0,0.252470927204373,0.94652465824877,0.390438744296638,0.861693590931196,0.716906393857656,0.891194696329576,0,1.21443210502468,1.75353514746787,1.58115111178609,46.2702695647402,0,0,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.913394847343798,0,0,0,0.16488625294148,0,0,0,0,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0.448549638131936,0.496375471371293,0.194451188344048,0.129159823477731,0.337912250981556,0,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,14.6835479080437,15.651058041244,13.1765968091061,12.2015759464018,15.7568979547248,9.82012066606611,12.8254275044043,10.8077088773813,9.06284817968409,9.31968561153276,0.103787347584177,0.798049746802062,0.512200817262403,0.972426868273176,0.419226325255965,1.10306105070008,0.888986911206461,1.23621034343337,1.60459604795908,0.505394423527595,2.28131369901216,0.943131706930381,1.49826411951812,1.53660365771686,1.32101578597911,0.952587382566147,0.811190281613988,0.578727661391115,2.88460130562315,1.61918812147837,0.685738504770831,0.532427418478012,1.43061713968393,0.726732083161643,1.59985946706062,1.01537529470012,0.548783918618318,0.789209134313529,1.62964936615034,1.12228454331548,1.42362021749009,1.18205378850676,0.818462086339379,1.39443157067369,1.54325288784913,2.49810577937946,1.16965804222704,0.859484216193193,0.382576664137687,0.220591419119515,0 | |||
|short_description=p4@Dlgap1 | |||
}} |
Latest revision as of 19:52, 26 September 2015
Short description: | p4@Dlgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dlgap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | 33bp_to_ENSMUST00000133983_5end |
EntrezGene: | Dlgap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.32e-25 | 23 |
neuroblast (sensu Vertebrata) | 5.32e-25 | 23 |
neuron | 1.17e-19 | 33 |
neuronal stem cell | 1.17e-19 | 33 |
neuroblast | 1.17e-19 | 33 |
electrically signaling cell | 1.17e-19 | 33 |
electrically responsive cell | 2.06e-15 | 39 |
electrically active cell | 2.06e-15 | 39 |
neural cell | 2.91e-13 | 43 |
ectodermal cell | 8.67e-13 | 44 |
neurectodermal cell | 8.67e-13 | 44 |
neuron of cerebral cortex | 4.71e-07 | 6 |