FFCP PHASE1:Mm9::chr19:8913640..8913651,-: Difference between revisions
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{{FFCP|EntrezGene=14704|HGNC=|MCL_coexpression_id=87|UniProt=P63216|association_with_transcript=84bp_to_ENSMUST00000096259,NM_010316,uc008gnh.1_5end|description=CAGE_peak_2_at_Gng3_5end|id=chr19:8913640..8913651,-|ontology_enrichment_celltype=CL:0002319!8.17e-27!43;CL:0000221!1.11e-26!44;CL:0000133!1.11e-26!44;CL:0000540!8.08e-25!33;CL:0000047!8.08e-25!33;CL:0000031!8.08e-25!33;CL:0000404!8.08e-25!33;CL:0000055!3.30e-20!50;CL:0000117!1.30e-19!23;CL:0000337!1.30e-19!23;CL:0000393!2.17e-18!39;CL:0000211!2.17e-18!39;CL:0002321!9.09e-10!70;CL:0000220!9.09e-10!70|ontology_enrichment_celltype_v019_2=CL:0000540,1.92e-30,33;CL:0000047,1.92e-30,33;CL:0000031,1.92e-30,33;CL:0000404,1.92e-30,33;CL:0002319,4.64e-30,43;CL:0000221,4.96e-29,44;CL:0000133,4.96e-29,44;CL:0000117,6.68e-25,23;CL:0000337,6.68e-25,23;CL:0000393,9.91e-24,39;CL:0000211,9.91e-24,39;CL:0002321,5.95e-13,70;CL:0000107,6.45e-08,9;CL:0002609,4.98e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.12e-41!75;UBERON:0001016!1.12e-41!75;UBERON:0001017!2.06e-40!73;UBERON:0005743!2.06e-40!73;UBERON:0004121!8.77e-37!102;UBERON:0000924!8.77e-37!102;UBERON:0006601!8.77e-37!102;UBERON:0002346!6.17e-31!71;UBERON:0003075!6.17e-31!71;UBERON:0007284!6.17e-31!71;UBERON:0001049!4.42e-26!52;UBERON:0005068!4.42e-26!52;UBERON:0006241!4.42e-26!52;UBERON:0007135!4.42e-26!52;UBERON:0000033!1.03e-25!63;UBERON:0000955!4.97e-24!50;UBERON:0006238!4.97e-24!50;UBERON:0002616!1.88e-23!49;UBERON:0002020!3.41e-23!34;UBERON:0003056!3.42e-22!49;UBERON:0003080!4.23e-19!40;UBERON:0002791!8.61e-19!29;UBERON:0003528!8.61e-19!29;UBERON:0001893!8.61e-19!29;UBERON:0002780!1.37e-18!39;UBERON:0001890!1.37e-18!39;UBERON:0006240!1.37e-18!39;UBERON:0000956!5.52e-13!21;UBERON:0001869!5.52e-13!21;UBERON:0000203!5.52e-13!21;UBERON:0007811!1.31e-12!86;UBERON:0000153!1.41e-10!94;UBERON:0002619!3.27e-10!17;UBERON:0003076!1.64e-07!12;UBERON:0003057!1.64e-07!12;UBERON:0000010!2.30e-07!11;UBERON:0002021!4.23e-07!10;UBERON:0000411!4.23e-07!10;UBERON:0001950!4.23e-07!10;UBERON:0002420!4.68e-07!8;UBERON:0007245!4.68e-07!8;UBERON:0010009!4.68e-07!8;UBERON:0010011!4.68e-07!8;UBERON:0000454!4.68e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.69e-45,75;UBERON:0001017,1.03e-43,73;UBERON:0004121,1.22e-39,95;UBERON:0000924,1.22e-39,95;UBERON:0006601,1.22e-39,95;UBERON:0002346,5.11e-33,64;UBERON:0003075,5.11e-33,64;UBERON:0007284,5.11e-33,64;UBERON:0000073,3.86e-30,54;UBERON:0001049,7.10e-28,52;UBERON:0005068,7.10e-28,52;UBERON:0006241,7.10e-28,52;UBERON:0007135,7.10e-28,52;UBERON:0002020,2.99e-27,34;UBERON:0010371,1.35e-26,73;UBERON:0000955,2.07e-22,47;UBERON:0006238,2.07e-22,47;UBERON:0002616,1.04e-21,46;UBERON:0003528,1.19e-21,29;UBERON:0002791,1.19e-21,29;UBERON:0001893,1.19e-21,29;UBERON:0003056,4.59e-21,49;UBERON:0003080,5.47e-19,40;UBERON:0002780,2.35e-18,39;UBERON:0001890,2.35e-18,39;UBERON:0006240,2.35e-18,39;UBERON:0010314,4.47e-18,92;UBERON:0000956,2.84e-14,21;UBERON:0001869,2.84e-14,21;UBERON:0000203,2.84e-14,21;UBERON:0002619,8.81e-11,17;UBERON:0003076,1.70e-09,12;UBERON:0003057,1.70e-09,12;UBERON:0000010,4.56e-09,11;UBERON:0002021,1.00e-08,10;UBERON:0000411,1.00e-08,10;UBERON:0001950,1.00e-08,10;UBERON:0002420,1.14e-08,8;UBERON:0007245,1.14e-08,8;UBERON:0010009,1.14e-08,8;UBERON:0010011,1.14e-08,8;UBERON:0000454,1.14e-08,8;UBERON:0002410,6.45e-08,9;UBERON:0002240,1.31e-07,6;UBERON:0005174,1.31e-07,6;UBERON:0001137,1.31e-07,6;UBERON:0001948,6.94e-07,5;UBERON:0002315,6.94e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4797861030117,0.439372365468944,0.58328969722285,0.55994568650145,2.87505128729943,0,0,0,0,0,0,59.0764065710026,31.2104677770499,62.7493089471117,0,0,0,0,0,2.99600110518405,5.37905627450176,22.5006458709397,14.1756235248275,29.0248446664907,60.2723577092026,84.1509141025648,24.4981598429908,21.4693855080849,14.7075005857603,47.3498288297371,25.9205296312931,21.0440950561054,73.460662265718,38.9737361746265,54.6959039084598,19.2636269310953,30.9519435517424,28.1148775909331,43.8996592355765,60.6503360204179,45.295065335548,2.65041676666144,4.98772296704784,0,0,0,0,0,0,2.66844398250329,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0,0.520455980298408,1.21786191324856,0.922461989024234,0.452167921657868,0.823120949949934,0,0,0,0,0,0,0,0,1.46390398505774,3.35114730901528,0,0,0,0,3.2953940669061,2.74500361691176,5.27748278874031,7.12679712788333,3.3243009452943,4.36354893575076,5.353961681236,0,0,0,0.841767423545896,0.780722657776222,1.83921683546778,3.78130472591233,1.35634336052144,1.49680298132921,2.562274405697,1.3118241438362,3.10444044886819,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,6.07137213037778,0,0.264450566663544,0.213288250535234,0.464473343720877,0.644337306610467,0.80673409849337,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.432276099749388,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,4.92289083687253,0,0,11.6738041184015,18.350620981942,20.2497993868831,1.67278158566786,2.89638276307112,3.67999490025482,6.07216052512342,11.9824901743638,9.48690667071656,4.17717711348349,0.425820255624806,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0,0.540183282093931,0.258717367565509,0,0.709360934569094,1.78368817602071,0.987294123612726,1.2178597964584,0,0,0.220528398054962,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,0.540026704109006,0.418176592028937,0.655087691238533,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,12.4287813856938,13.1765968091061,8.93636548187176,6.16574267793578,4.5323633843382,2.70009000092722,4.5032120322422,7.70342095273148,3.62432218226274,1.45302286617847,3.19219898720825,1.19513524027894,0.486213434136588,2.93458427679175,1.47074806760011,1.33348036680969,2.06035057238894,1.92551525755089,2.27427490587418,1.2673964994512,2.07488975524684,1.96647165686753,1.28050304809739,1.03383844120104,1.42888107384922,0.811190281613988,0.964546102318525,1.64834360321323,1.76638704161277,2.05721551431249,1.06485483695602,1.1921809497366,1.45346416632329,1.88218760830661,1.52306294205018,0.914639864363863,0.789209134313529,1.22223702461276,1.68342681497322,1.30498519936592,0.591026894253381,1.63692417267876,1.39443157067369,0.385813221962283,2.99772693525535,0.935726433781634,1.07435527024149,0.382576664137687,0.441182838239031,0.927471342481686|short_description=p2@Gng3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14704 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=P63216 | |||
|association_with_transcript=84bp_to_ENSMUST00000096259,NM_010316,uc008gnh.1_5end | |||
|cluster_id=chr19:8913640..8913651,- | |||
|description=CAGE_peak_2_at_Gng3_5end | |||
|id=chr19:8913640..8913651,- | |||
|ontology_enrichment_celltype=CL:0002319!8.17e-27!43;CL:0000221!1.11e-26!44;CL:0000133!1.11e-26!44;CL:0000540!8.08e-25!33;CL:0000047!8.08e-25!33;CL:0000031!8.08e-25!33;CL:0000404!8.08e-25!33;CL:0000055!3.30e-20!50;CL:0000117!1.30e-19!23;CL:0000337!1.30e-19!23;CL:0000393!2.17e-18!39;CL:0000211!2.17e-18!39;CL:0002321!9.09e-10!70;CL:0000220!9.09e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.92e-30,33;CL:0000047,1.92e-30,33;CL:0000031,1.92e-30,33;CL:0000404,1.92e-30,33;CL:0002319,4.64e-30,43;CL:0000221,4.96e-29,44;CL:0000133,4.96e-29,44;CL:0000117,6.68e-25,23;CL:0000337,6.68e-25,23;CL:0000393,9.91e-24,39;CL:0000211,9.91e-24,39;CL:0002321,5.95e-13,70;CL:0000107,6.45e-08,9;CL:0002609,4.98e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.12e-41!75;UBERON:0001016!1.12e-41!75;UBERON:0001017!2.06e-40!73;UBERON:0005743!2.06e-40!73;UBERON:0004121!8.77e-37!102;UBERON:0000924!8.77e-37!102;UBERON:0006601!8.77e-37!102;UBERON:0002346!6.17e-31!71;UBERON:0003075!6.17e-31!71;UBERON:0007284!6.17e-31!71;UBERON:0001049!4.42e-26!52;UBERON:0005068!4.42e-26!52;UBERON:0006241!4.42e-26!52;UBERON:0007135!4.42e-26!52;UBERON:0000033!1.03e-25!63;UBERON:0000955!4.97e-24!50;UBERON:0006238!4.97e-24!50;UBERON:0002616!1.88e-23!49;UBERON:0002020!3.41e-23!34;UBERON:0003056!3.42e-22!49;UBERON:0003080!4.23e-19!40;UBERON:0002791!8.61e-19!29;UBERON:0003528!8.61e-19!29;UBERON:0001893!8.61e-19!29;UBERON:0002780!1.37e-18!39;UBERON:0001890!1.37e-18!39;UBERON:0006240!1.37e-18!39;UBERON:0000956!5.52e-13!21;UBERON:0001869!5.52e-13!21;UBERON:0000203!5.52e-13!21;UBERON:0007811!1.31e-12!86;UBERON:0000153!1.41e-10!94;UBERON:0002619!3.27e-10!17;UBERON:0003076!1.64e-07!12;UBERON:0003057!1.64e-07!12;UBERON:0000010!2.30e-07!11;UBERON:0002021!4.23e-07!10;UBERON:0000411!4.23e-07!10;UBERON:0001950!4.23e-07!10;UBERON:0002420!4.68e-07!8;UBERON:0007245!4.68e-07!8;UBERON:0010009!4.68e-07!8;UBERON:0010011!4.68e-07!8;UBERON:0000454!4.68e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.69e-45,75;UBERON:0001017,1.03e-43,73;UBERON:0004121,1.22e-39,95;UBERON:0000924,1.22e-39,95;UBERON:0006601,1.22e-39,95;UBERON:0002346,5.11e-33,64;UBERON:0003075,5.11e-33,64;UBERON:0007284,5.11e-33,64;UBERON:0000073,3.86e-30,54;UBERON:0001049,7.10e-28,52;UBERON:0005068,7.10e-28,52;UBERON:0006241,7.10e-28,52;UBERON:0007135,7.10e-28,52;UBERON:0002020,2.99e-27,34;UBERON:0010371,1.35e-26,73;UBERON:0000955,2.07e-22,47;UBERON:0006238,2.07e-22,47;UBERON:0002616,1.04e-21,46;UBERON:0003528,1.19e-21,29;UBERON:0002791,1.19e-21,29;UBERON:0001893,1.19e-21,29;UBERON:0003056,4.59e-21,49;UBERON:0003080,5.47e-19,40;UBERON:0002780,2.35e-18,39;UBERON:0001890,2.35e-18,39;UBERON:0006240,2.35e-18,39;UBERON:0010314,4.47e-18,92;UBERON:0000956,2.84e-14,21;UBERON:0001869,2.84e-14,21;UBERON:0000203,2.84e-14,21;UBERON:0002619,8.81e-11,17;UBERON:0003076,1.70e-09,12;UBERON:0003057,1.70e-09,12;UBERON:0000010,4.56e-09,11;UBERON:0002021,1.00e-08,10;UBERON:0000411,1.00e-08,10;UBERON:0001950,1.00e-08,10;UBERON:0002420,1.14e-08,8;UBERON:0007245,1.14e-08,8;UBERON:0010009,1.14e-08,8;UBERON:0010011,1.14e-08,8;UBERON:0000454,1.14e-08,8;UBERON:0002410,6.45e-08,9;UBERON:0002240,1.31e-07,6;UBERON:0005174,1.31e-07,6;UBERON:0001137,1.31e-07,6;UBERON:0001948,6.94e-07,5;UBERON:0002315,6.94e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4797861030117,0.439372365468944,0.58328969722285,0.55994568650145,2.87505128729943,0,0,0,0,0,0,59.0764065710026,31.2104677770499,62.7493089471117,0,0,0,0,0,2.99600110518405,5.37905627450176,22.5006458709397,14.1756235248275,29.0248446664907,60.2723577092026,84.1509141025648,24.4981598429908,21.4693855080849,14.7075005857603,47.3498288297371,25.9205296312931,21.0440950561054,73.460662265718,38.9737361746265,54.6959039084598,19.2636269310953,30.9519435517424,28.1148775909331,43.8996592355765,60.6503360204179,45.295065335548,2.65041676666144,4.98772296704784,0,0,0,0,0,0,2.66844398250329,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0,0.520455980298408,1.21786191324856,0.922461989024234,0.452167921657868,0.823120949949934,0,0,0,0,0,0,0,0,1.46390398505774,3.35114730901528,0,0,0,0,3.2953940669061,2.74500361691176,5.27748278874031,7.12679712788333,3.3243009452943,4.36354893575076,5.353961681236,0,0,0,0.841767423545896,0.780722657776222,1.83921683546778,3.78130472591233,1.35634336052144,1.49680298132921,2.562274405697,1.3118241438362,3.10444044886819,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,6.07137213037778,0,0.264450566663544,0.213288250535234,0.464473343720877,0.644337306610467,0.80673409849337,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.432276099749388,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,4.92289083687253,0,0,11.6738041184015,18.350620981942,20.2497993868831,1.67278158566786,2.89638276307112,3.67999490025482,6.07216052512342,11.9824901743638,9.48690667071656,4.17717711348349,0.425820255624806,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0,0.540183282093931,0.258717367565509,0,0.709360934569094,1.78368817602071,0.987294123612726,1.2178597964584,0,0,0.220528398054962,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,0.540026704109006,0.418176592028937,0.655087691238533,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,12.4287813856938,13.1765968091061,8.93636548187176,6.16574267793578,4.5323633843382,2.70009000092722,4.5032120322422,7.70342095273148,3.62432218226274,1.45302286617847,3.19219898720825,1.19513524027894,0.486213434136588,2.93458427679175,1.47074806760011,1.33348036680969,2.06035057238894,1.92551525755089,2.27427490587418,1.2673964994512,2.07488975524684,1.96647165686753,1.28050304809739,1.03383844120104,1.42888107384922,0.811190281613988,0.964546102318525,1.64834360321323,1.76638704161277,2.05721551431249,1.06485483695602,1.1921809497366,1.45346416632329,1.88218760830661,1.52306294205018,0.914639864363863,0.789209134313529,1.22223702461276,1.68342681497322,1.30498519936592,0.591026894253381,1.63692417267876,1.39443157067369,0.385813221962283,2.99772693525535,0.935726433781634,1.07435527024149,0.382576664137687,0.441182838239031,0.927471342481686 | |||
|short_description=p2@Gng3 | |||
}} |
Latest revision as of 04:43, 26 September 2015
Short description: | p2@Gng3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gng3_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 84bp_to_ENSMUST00000096259, NM_010316, uc008gnh.1_5end |
EntrezGene: | Gng3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.92e-30 | 33 |
neuronal stem cell | 1.92e-30 | 33 |
neuroblast | 1.92e-30 | 33 |
electrically signaling cell | 1.92e-30 | 33 |
neural cell | 4.64e-30 | 43 |
ectodermal cell | 4.96e-29 | 44 |
neurectodermal cell | 4.96e-29 | 44 |
CNS neuron (sensu Vertebrata) | 6.68e-25 | 23 |
neuroblast (sensu Vertebrata) | 6.68e-25 | 23 |
electrically responsive cell | 9.91e-24 | 39 |
electrically active cell | 9.91e-24 | 39 |
embryonic cell | 5.95e-13 | 70 |
autonomic neuron | 6.45e-08 | 9 |
neuron of cerebral cortex | 4.98e-07 | 6 |