FFCP PHASE1:Mm9::chr1:42752574..42752621,+: Difference between revisions
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{{FFCP|EntrezGene=18993|HGNC=|MCL_coexpression_id=100|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_4_at_Pou3f3_5end|id=chr1:42752574..42752621,+|ontology_enrichment_celltype=CL:0000221!1.05e-20!44;CL:0000133!1.05e-20!44;CL:0002319!3.12e-20!43;CL:0000540!3.43e-16!33;CL:0000047!3.43e-16!33;CL:0000031!3.43e-16!33;CL:0000404!3.43e-16!33;CL:0000055!8.40e-15!50;CL:0000117!3.20e-14!23;CL:0000337!3.20e-14!23;CL:0000393!1.28e-11!39;CL:0000211!1.28e-11!39|ontology_enrichment_celltype_v019_2=CL:0000221,3.87e-21,44;CL:0000133,3.87e-21,44;CL:0002319,1.38e-20,43;CL:0000540,2.57e-17,33;CL:0000047,2.57e-17,33;CL:0000031,2.57e-17,33;CL:0000404,2.57e-17,33;CL:0000117,1.38e-16,23;CL:0000337,1.38e-16,23;CL:0000393,1.25e-12,39;CL:0000211,1.25e-12,39;CL:0002321,1.74e-07,70;CL:0002609,8.50e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.26e-32!73;UBERON:0005743!3.26e-32!73;UBERON:0000073!4.86e-32!75;UBERON:0001016!4.86e-32!75;UBERON:0004121!1.63e-26!102;UBERON:0000924!1.63e-26!102;UBERON:0006601!1.63e-26!102;UBERON:0002346!2.92e-22!71;UBERON:0003075!2.92e-22!71;UBERON:0007284!2.92e-22!71;UBERON:0001049!3.79e-22!52;UBERON:0005068!3.79e-22!52;UBERON:0006241!3.79e-22!52;UBERON:0007135!3.79e-22!52;UBERON:0000033!8.62e-22!63;UBERON:0000955!1.96e-21!50;UBERON:0006238!1.96e-21!50;UBERON:0002616!4.47e-21!49;UBERON:0002020!5.76e-21!34;UBERON:0002791!6.60e-19!29;UBERON:0003528!6.60e-19!29;UBERON:0001893!6.60e-19!29;UBERON:0003056!3.82e-18!49;UBERON:0003080!2.11e-17!40;UBERON:0002780!5.15e-17!39;UBERON:0001890!5.15e-17!39;UBERON:0006240!5.15e-17!39;UBERON:0000956!1.16e-14!21;UBERON:0001869!1.16e-14!21;UBERON:0000203!1.16e-14!21;UBERON:0002619!7.94e-12!17;UBERON:0007811!7.08e-11!86;UBERON:0000153!1.06e-10!94;UBERON:0000489!2.98e-09!21;UBERON:0002113!2.24e-07!14;UBERON:0003918!2.24e-07!14;UBERON:0005095!2.24e-07!14;UBERON:0007687!2.24e-07!14;UBERON:0002021!2.27e-07!10;UBERON:0000411!2.27e-07!10;UBERON:0001950!2.27e-07!10;UBERON:0006554!6.25e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.89e-34,73;UBERON:0001016,2.33e-32,75;UBERON:0004121,9.68e-28,95;UBERON:0000924,9.68e-28,95;UBERON:0006601,9.68e-28,95;UBERON:0002346,4.63e-27,64;UBERON:0003075,4.63e-27,64;UBERON:0007284,4.63e-27,64;UBERON:0000073,2.69e-25,54;UBERON:0002020,1.33e-24,34;UBERON:0001049,7.55e-24,52;UBERON:0005068,7.55e-24,52;UBERON:0006241,7.55e-24,52;UBERON:0007135,7.55e-24,52;UBERON:0010371,2.14e-23,73;UBERON:0003528,3.74e-22,29;UBERON:0002791,3.74e-22,29;UBERON:0001893,3.74e-22,29;UBERON:0000955,4.00e-21,47;UBERON:0006238,4.00e-21,47;UBERON:0002616,1.04e-20,46;UBERON:0003056,2.88e-19,49;UBERON:0003080,2.94e-18,40;UBERON:0002780,8.43e-18,39;UBERON:0001890,8.43e-18,39;UBERON:0006240,8.43e-18,39;UBERON:0000956,4.13e-17,21;UBERON:0001869,4.13e-17,21;UBERON:0000203,4.13e-17,21;UBERON:0010314,2.97e-14,92;UBERON:0002619,9.60e-14,17;UBERON:0000489,2.83e-10,21;UBERON:0002113,1.82e-08,14;UBERON:0003918,1.82e-08,14;UBERON:0011143,1.82e-08,14;UBERON:0005095,1.82e-08,14;UBERON:0007687,1.82e-08,14;UBERON:0002021,1.84e-08,10;UBERON:0000411,1.84e-08,10;UBERON:0001950,1.84e-08,10;UBERON:0001954,9.98e-07,7;UBERON:0003022,9.98e-07,7;UBERON:0002421,9.98e-07,7;UBERON:0000349,9.98e-07,7;UBERON:0002600,9.98e-07,7|phase1_expression=78.7932327755586,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7330086779479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,150.219332746128,54.482173318149,43.7467272917138,42.1359129092341,57.5010257459886,0,0,0,0,0,0.515672092277442,117.343547298567,108.443150750767,103.948350175013,3.38844532069132,1.77858959222228,0,0,0,42.8428158041319,78.3805342855971,301.218323756128,371.266330412149,312.122242645451,31.7072592688222,36.2224407160646,234.814862095067,330.475184070879,241.754540878436,39.6417171597799,39.5830748064082,43.3170423782607,59.216943190857,56.6308513898916,51.5704236851192,38.806436861192,22.5105044012672,35.4491934842199,28.8736013764194,29.1861945638161,30.7559085611746,0.757261933331841,0.755715601067855,0,0,0,0,0,0,5.19644354487482,0,0,0,35.3516983639468,0,0,0,0,0,0,13.7020655662872,0,0,0.693941307064543,0.608930956624282,1.38369298353635,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,3.23533699894818,0.441683036920787,0,1.86391761218122,16.1029438356351,12.1479089951804,0,0,0,0,25.9137806170343,37.972550033946,98.3873577043728,44.6728502894151,46.2844977767898,32.6227229958509,33.2594589288903,4.88828946481518,22.0200337979865,76.5749958054034,2.73574412652416,3.77349284591841,4.82794419310293,5.94205028357652,3.76762044589288,3.40182495756639,5.50888997224854,6.09061209638237,3.10444044886819,0,1.89106080167819,2.63926686245923,3.06874025398605,3.05851974148158,1.74126083261083,1.64625709126355,2.7864797354589,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,42.2682796613896,86.2340651738403,0,0,0.853153002140936,1.16118335930219,1.03093969057675,0.20168352462334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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18993 | |||
|HGNC= | |||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:42752574..42752621,+ | |||
|description=CAGE_peak_4_at_Pou3f3_5end | |||
|id=chr1:42752574..42752621,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.05e-20!44;CL:0000133!1.05e-20!44;CL:0002319!3.12e-20!43;CL:0000540!3.43e-16!33;CL:0000047!3.43e-16!33;CL:0000031!3.43e-16!33;CL:0000404!3.43e-16!33;CL:0000055!8.40e-15!50;CL:0000117!3.20e-14!23;CL:0000337!3.20e-14!23;CL:0000393!1.28e-11!39;CL:0000211!1.28e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.87e-21,44;CL:0000133,3.87e-21,44;CL:0002319,1.38e-20,43;CL:0000540,2.57e-17,33;CL:0000047,2.57e-17,33;CL:0000031,2.57e-17,33;CL:0000404,2.57e-17,33;CL:0000117,1.38e-16,23;CL:0000337,1.38e-16,23;CL:0000393,1.25e-12,39;CL:0000211,1.25e-12,39;CL:0002321,1.74e-07,70;CL:0002609,8.50e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.26e-32!73;UBERON:0005743!3.26e-32!73;UBERON:0000073!4.86e-32!75;UBERON:0001016!4.86e-32!75;UBERON:0004121!1.63e-26!102;UBERON:0000924!1.63e-26!102;UBERON:0006601!1.63e-26!102;UBERON:0002346!2.92e-22!71;UBERON:0003075!2.92e-22!71;UBERON:0007284!2.92e-22!71;UBERON:0001049!3.79e-22!52;UBERON:0005068!3.79e-22!52;UBERON:0006241!3.79e-22!52;UBERON:0007135!3.79e-22!52;UBERON:0000033!8.62e-22!63;UBERON:0000955!1.96e-21!50;UBERON:0006238!1.96e-21!50;UBERON:0002616!4.47e-21!49;UBERON:0002020!5.76e-21!34;UBERON:0002791!6.60e-19!29;UBERON:0003528!6.60e-19!29;UBERON:0001893!6.60e-19!29;UBERON:0003056!3.82e-18!49;UBERON:0003080!2.11e-17!40;UBERON:0002780!5.15e-17!39;UBERON:0001890!5.15e-17!39;UBERON:0006240!5.15e-17!39;UBERON:0000956!1.16e-14!21;UBERON:0001869!1.16e-14!21;UBERON:0000203!1.16e-14!21;UBERON:0002619!7.94e-12!17;UBERON:0007811!7.08e-11!86;UBERON:0000153!1.06e-10!94;UBERON:0000489!2.98e-09!21;UBERON:0002113!2.24e-07!14;UBERON:0003918!2.24e-07!14;UBERON:0005095!2.24e-07!14;UBERON:0007687!2.24e-07!14;UBERON:0002021!2.27e-07!10;UBERON:0000411!2.27e-07!10;UBERON:0001950!2.27e-07!10;UBERON:0006554!6.25e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.89e-34,73;UBERON:0001016,2.33e-32,75;UBERON:0004121,9.68e-28,95;UBERON:0000924,9.68e-28,95;UBERON:0006601,9.68e-28,95;UBERON:0002346,4.63e-27,64;UBERON:0003075,4.63e-27,64;UBERON:0007284,4.63e-27,64;UBERON:0000073,2.69e-25,54;UBERON:0002020,1.33e-24,34;UBERON:0001049,7.55e-24,52;UBERON:0005068,7.55e-24,52;UBERON:0006241,7.55e-24,52;UBERON:0007135,7.55e-24,52;UBERON:0010371,2.14e-23,73;UBERON:0003528,3.74e-22,29;UBERON:0002791,3.74e-22,29;UBERON:0001893,3.74e-22,29;UBERON:0000955,4.00e-21,47;UBERON:0006238,4.00e-21,47;UBERON:0002616,1.04e-20,46;UBERON:0003056,2.88e-19,49;UBERON:0003080,2.94e-18,40;UBERON:0002780,8.43e-18,39;UBERON:0001890,8.43e-18,39;UBERON:0006240,8.43e-18,39;UBERON:0000956,4.13e-17,21;UBERON:0001869,4.13e-17,21;UBERON:0000203,4.13e-17,21;UBERON:0010314,2.97e-14,92;UBERON:0002619,9.60e-14,17;UBERON:0000489,2.83e-10,21;UBERON:0002113,1.82e-08,14;UBERON:0003918,1.82e-08,14;UBERON:0011143,1.82e-08,14;UBERON:0005095,1.82e-08,14;UBERON:0007687,1.82e-08,14;UBERON:0002021,1.84e-08,10;UBERON:0000411,1.84e-08,10;UBERON:0001950,1.84e-08,10;UBERON:0001954,9.98e-07,7;UBERON:0003022,9.98e-07,7;UBERON:0002421,9.98e-07,7;UBERON:0000349,9.98e-07,7;UBERON:0002600,9.98e-07,7 | |||
|phase1_expression=78.7932327755586,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7330086779479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,150.219332746128,54.482173318149,43.7467272917138,42.1359129092341,57.5010257459886,0,0,0,0,0,0.515672092277442,117.343547298567,108.443150750767,103.948350175013,3.38844532069132,1.77858959222228,0,0,0,42.8428158041319,78.3805342855971,301.218323756128,371.266330412149,312.122242645451,31.7072592688222,36.2224407160646,234.814862095067,330.475184070879,241.754540878436,39.6417171597799,39.5830748064082,43.3170423782607,59.216943190857,56.6308513898916,51.5704236851192,38.806436861192,22.5105044012672,35.4491934842199,28.8736013764194,29.1861945638161,30.7559085611746,0.757261933331841,0.755715601067855,0,0,0,0,0,0,5.19644354487482,0,0,0,35.3516983639468,0,0,0,0,0,0,13.7020655662872,0,0,0.693941307064543,0.608930956624282,1.38369298353635,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,3.23533699894818,0.441683036920787,0,1.86391761218122,16.1029438356351,12.1479089951804,0,0,0,0,25.9137806170343,37.972550033946,98.3873577043728,44.6728502894151,46.2844977767898,32.6227229958509,33.2594589288903,4.88828946481518,22.0200337979865,76.5749958054034,2.73574412652416,3.77349284591841,4.82794419310293,5.94205028357652,3.76762044589288,3.40182495756639,5.50888997224854,6.09061209638237,3.10444044886819,0,1.89106080167819,2.63926686245923,3.06874025398605,3.05851974148158,1.74126083261083,1.64625709126355,2.7864797354589,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,42.2682796613896,86.2340651738403,0,0,0.853153002140936,1.16118335930219,1.03093969057675,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,27.3121777372438,27.0768974885057,39.4477074855781,33.6024690944769,42.6695471768777,25.8801175395276,49.893627791039,65.5389057029434,59.3455191240397,44.0527875200828,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0.476087281772027,0.585400943573396,0,0.221464689648775,0,0.491589944147214,0,0.433947175744535,0,0,0,0,27.775252067888,23.5595490050328,0,0,43.2246260600272,44.1195781055201,40.9304455692318,8.60287672629187,6.01556420022464,8.20921939287614,0.809621403349789,0.876767573733936,1.97643888973262,17.6726724031994,0,1.24645922567079,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,4.78627129996192,1.28602221018955,0.354680467284547,0.356737635204141,0.658196082408484,0.304464949114599,0.469343416127421,0.21183207086382,2.42581237860458,0,0.484393280087717,0.120625849856312,0.238744688006273,0.164140899745061,0,23.9198639593557,0,0,0,0,0,0,0,0,0,0,0,0.813277868507395,0,0,0,0,0,0,0.388844919875379,0,0,0.299033092087958,0.165458490457098,0,0.645799117388655,0.168956125490778,0.117357238645754,2.604087696879,0.419437377702843,0.483168241652012,0.864090018773596,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0,0.596044064343795,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0.62799699626633,0,0.19318959403219,0,0,0,19.0597399533438,58.7341916321749,51.0961012522966,61.8727154514548,55.8522842616985,57.546931660734,56.6545423042275,56.7018900194717,55.3895079965791,47.1268105343573,48.1517089929193,41.8263010764232,27.9317411380722,23.2197703825622,12.8846560046196,19.0747977991464,16.1782287436012,12.2235700290888,12.9802086060503,12.194929964489,14.6564382823003,13.9413614939632,12.0720858487089,11.8924714486751,12.9330807857836,13.4398997356135,16.6702791949076,14.0220034393275,16.2043745189512,9.47797571847605,13.5423006523646,12.6861623382604,14.0205886865877,16.2136609164178,11.1916740806893,11.5754537910857,12.0152743206181,12.6220301282213,12.6273461490165,16.1606895476576,15.7119836064167,15.8970924286393,13.1996006383255,11.4584692087513,12.8597578184352,11.5743966588685,36.971965534816,8.18760629558929,12.247650080753,2.10417165275728,1.98532277207564,0.463735671240843 | |||
|short_description=p4@Pou3f3 | |||
}} |
Latest revision as of 03:49, 27 September 2015
Short description: | p4@Pou3f3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pou3f3_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | Pou3f3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.87e-21 | 44 |
neurectodermal cell | 3.87e-21 | 44 |
neural cell | 1.38e-20 | 43 |
neuron | 2.57e-17 | 33 |
neuronal stem cell | 2.57e-17 | 33 |
neuroblast | 2.57e-17 | 33 |
electrically signaling cell | 2.57e-17 | 33 |
CNS neuron (sensu Vertebrata) | 1.38e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-16 | 23 |
electrically responsive cell | 1.25e-12 | 39 |
electrically active cell | 1.25e-12 | 39 |
embryonic cell | 1.74e-07 | 70 |
neuron of cerebral cortex | 8.50e-07 | 6 |