FFCP PHASE1:Mm9::chr2:32178983..32179012,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1237|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:32178983..32179012,-|id=chr2:32178983..32179012,-|ontology_enrichment_celltype=CL:0000117!1.98e-17!23;CL:0000337!1.98e-17!23;CL:0000540!3.25e-10!33;CL:0000047!3.25e-10!33;CL:0000031!3.25e-10!33;CL:0000404!3.25e-10!33;CL:0000393!9.66e-08!39;CL:0000211!9.66e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.14e-33,23;CL:0000337,2.14e-33,23;CL:0000540,2.05e-22,33;CL:0000047,2.05e-22,33;CL:0000031,2.05e-22,33;CL:0000404,2.05e-22,33;CL:0000393,1.59e-18,39;CL:0000211,1.59e-18,39;CL:0002319,1.56e-16,43;CL:0000221,4.30e-16,44;CL:0000133,4.30e-16,44;CL:0002612,3.21e-12,3;CL:0002608,5.33e-12,3;CL:0000120,6.31e-12,3;CL:0002321,4.85e-09,70;CL:0002611,3.21e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.48e-25!34;UBERON:0001049!2.11e-23!52;UBERON:0005068!2.11e-23!52;UBERON:0006241!2.11e-23!52;UBERON:0007135!2.11e-23!52;UBERON:0001017!1.34e-20!73;UBERON:0005743!1.34e-20!73;UBERON:0000073!1.10e-19!75;UBERON:0001016!1.10e-19!75;UBERON:0002791!5.38e-19!29;UBERON:0003528!5.38e-19!29;UBERON:0001893!5.38e-19!29;UBERON:0000955!7.11e-19!50;UBERON:0006238!7.11e-19!50;UBERON:0002616!4.86e-18!49;UBERON:0002346!1.10e-15!71;UBERON:0003075!1.10e-15!71;UBERON:0007284!1.10e-15!71;UBERON:0003080!1.47e-15!40;UBERON:0002780!1.23e-14!39;UBERON:0001890!1.23e-14!39;UBERON:0006240!1.23e-14!39;UBERON:0000033!1.61e-14!63;UBERON:0000956!2.79e-14!21;UBERON:0001869!2.79e-14!21;UBERON:0000203!2.79e-14!21;UBERON:0004121!5.17e-13!102;UBERON:0000924!5.17e-13!102;UBERON:0006601!5.17e-13!102;UBERON:0003056!6.38e-13!49;UBERON:0002619!6.54e-13!17;UBERON:0002021!1.17e-09!10;UBERON:0000411!1.17e-09!10;UBERON:0001950!1.17e-09!10;UBERON:0003076!9.85e-09!12;UBERON:0003057!9.85e-09!12;UBERON:0002240!1.86e-08!6;UBERON:0005174!1.86e-08!6;UBERON:0001137!1.86e-08!6;UBERON:0007811!6.49e-08!86;UBERON:0001948!1.10e-07!5;UBERON:0002315!1.10e-07!5;UBERON:0000153!1.55e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.29e-39,34;UBERON:0001049,4.98e-27,52;UBERON:0005068,4.98e-27,52;UBERON:0006241,4.98e-27,52;UBERON:0007135,4.98e-27,52;UBERON:0000073,6.84e-26,54;UBERON:0003528,5.08e-25,29;UBERON:0002791,5.08e-25,29;UBERON:0001893,5.08e-25,29;UBERON:0001017,6.89e-25,73;UBERON:0001016,4.04e-24,75;UBERON:0002346,2.89e-21,64;UBERON:0003075,2.89e-21,64;UBERON:0007284,2.89e-21,64;UBERON:0003080,7.77e-20,40;UBERON:0002619,2.02e-19,17;UBERON:0001948,8.71e-19,5;UBERON:0002315,8.71e-19,5;UBERON:0004121,3.27e-18,95;UBERON:0000924,3.27e-18,95;UBERON:0006601,3.27e-18,95;UBERON:0010371,3.51e-18,73;UBERON:0002780,6.98e-18,39;UBERON:0001890,6.98e-18,39;UBERON:0006240,6.98e-18,39;UBERON:0002616,7.43e-17,46;UBERON:0000955,1.97e-16,47;UBERON:0006238,1.97e-16,47;UBERON:0002021,2.38e-16,10;UBERON:0000411,2.38e-16,10;UBERON:0001950,2.38e-16,10;UBERON:0003056,1.22e-15,49;UBERON:0002240,1.27e-15,6;UBERON:0005174,1.27e-15,6;UBERON:0001137,1.27e-15,6;UBERON:0000956,2.10e-15,21;UBERON:0001869,2.10e-15,21;UBERON:0000203,2.10e-15,21;UBERON:0010314,1.22e-13,92;UBERON:0002257,3.21e-12,3;UBERON:0002420,4.14e-11,8;UBERON:0007245,4.14e-11,8;UBERON:0010009,4.14e-11,8;UBERON:0010011,4.14e-11,8;UBERON:0000454,4.14e-11,8;UBERON:0000025,2.91e-10,114;UBERON:0004111,2.47e-09,122;UBERON:0002256,3.21e-08,2;UBERON:0002950,3.43e-08,4;UBERON:0001891,3.43e-08,4;UBERON:0009616,3.43e-08,4;UBERON:0010286,3.43e-08,4;UBERON:0003076,1.12e-07,12;UBERON:0003057,1.12e-07,12;UBERON:0000369,3.38e-07,5;UBERON:0002435,3.38e-07,5;UBERON:0000204,3.38e-07,5;UBERON:0010082,3.38e-07,5;UBERON:0011216,8.62e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0,1.99955689082663,2.65042249141936,3.79721477566358,4.88811902193005,1.83843757322004,0,0.510749352340751,0.46081959976873,2.2420668914133,2.19570344645783,0,0,2.25105044012672,1.06958773443767,3.83017161115768,2.56269025438385,3.72798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,1.04853447583376,0.915001205637253,16.3350657746724,0.695297280769106,1.02286182932132,0.20778804455956,0.973447578406546,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.76195141904306,1.71868654031819,1.03111909406213,0.685082519770642,2.2661816921691,1.35004500046361,0.45032120322422,0,1.55328093525546,0,0,0.170733605754134,0,0.628839487883947,0,0.222246727801615,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.655490552289177,0.512201219238954,0.402048282689293,0,0.115884325944855,0.77163688185482,0,0.294397840268795,0.342869252385415,0.354951612318675,0.715308569841963,0,0.282328141245992,0.423073039458382,0.548783918618318,0.789209134313529,0.543216455383447,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0,0.385813221962283,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0,0|short_description=p@chr2:32178983..32179012,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1237 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:32178983..32179012,- | |||
|description=CAGE_peak_at_chr2:32178983..32179012,- | |||
|id=chr2:32178983..32179012,- | |||
|ontology_enrichment_celltype=CL:0000117!1.98e-17!23;CL:0000337!1.98e-17!23;CL:0000540!3.25e-10!33;CL:0000047!3.25e-10!33;CL:0000031!3.25e-10!33;CL:0000404!3.25e-10!33;CL:0000393!9.66e-08!39;CL:0000211!9.66e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.14e-33,23;CL:0000337,2.14e-33,23;CL:0000540,2.05e-22,33;CL:0000047,2.05e-22,33;CL:0000031,2.05e-22,33;CL:0000404,2.05e-22,33;CL:0000393,1.59e-18,39;CL:0000211,1.59e-18,39;CL:0002319,1.56e-16,43;CL:0000221,4.30e-16,44;CL:0000133,4.30e-16,44;CL:0002612,3.21e-12,3;CL:0002608,5.33e-12,3;CL:0000120,6.31e-12,3;CL:0002321,4.85e-09,70;CL:0002611,3.21e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.48e-25!34;UBERON:0001049!2.11e-23!52;UBERON:0005068!2.11e-23!52;UBERON:0006241!2.11e-23!52;UBERON:0007135!2.11e-23!52;UBERON:0001017!1.34e-20!73;UBERON:0005743!1.34e-20!73;UBERON:0000073!1.10e-19!75;UBERON:0001016!1.10e-19!75;UBERON:0002791!5.38e-19!29;UBERON:0003528!5.38e-19!29;UBERON:0001893!5.38e-19!29;UBERON:0000955!7.11e-19!50;UBERON:0006238!7.11e-19!50;UBERON:0002616!4.86e-18!49;UBERON:0002346!1.10e-15!71;UBERON:0003075!1.10e-15!71;UBERON:0007284!1.10e-15!71;UBERON:0003080!1.47e-15!40;UBERON:0002780!1.23e-14!39;UBERON:0001890!1.23e-14!39;UBERON:0006240!1.23e-14!39;UBERON:0000033!1.61e-14!63;UBERON:0000956!2.79e-14!21;UBERON:0001869!2.79e-14!21;UBERON:0000203!2.79e-14!21;UBERON:0004121!5.17e-13!102;UBERON:0000924!5.17e-13!102;UBERON:0006601!5.17e-13!102;UBERON:0003056!6.38e-13!49;UBERON:0002619!6.54e-13!17;UBERON:0002021!1.17e-09!10;UBERON:0000411!1.17e-09!10;UBERON:0001950!1.17e-09!10;UBERON:0003076!9.85e-09!12;UBERON:0003057!9.85e-09!12;UBERON:0002240!1.86e-08!6;UBERON:0005174!1.86e-08!6;UBERON:0001137!1.86e-08!6;UBERON:0007811!6.49e-08!86;UBERON:0001948!1.10e-07!5;UBERON:0002315!1.10e-07!5;UBERON:0000153!1.55e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.29e-39,34;UBERON:0001049,4.98e-27,52;UBERON:0005068,4.98e-27,52;UBERON:0006241,4.98e-27,52;UBERON:0007135,4.98e-27,52;UBERON:0000073,6.84e-26,54;UBERON:0003528,5.08e-25,29;UBERON:0002791,5.08e-25,29;UBERON:0001893,5.08e-25,29;UBERON:0001017,6.89e-25,73;UBERON:0001016,4.04e-24,75;UBERON:0002346,2.89e-21,64;UBERON:0003075,2.89e-21,64;UBERON:0007284,2.89e-21,64;UBERON:0003080,7.77e-20,40;UBERON:0002619,2.02e-19,17;UBERON:0001948,8.71e-19,5;UBERON:0002315,8.71e-19,5;UBERON:0004121,3.27e-18,95;UBERON:0000924,3.27e-18,95;UBERON:0006601,3.27e-18,95;UBERON:0010371,3.51e-18,73;UBERON:0002780,6.98e-18,39;UBERON:0001890,6.98e-18,39;UBERON:0006240,6.98e-18,39;UBERON:0002616,7.43e-17,46;UBERON:0000955,1.97e-16,47;UBERON:0006238,1.97e-16,47;UBERON:0002021,2.38e-16,10;UBERON:0000411,2.38e-16,10;UBERON:0001950,2.38e-16,10;UBERON:0003056,1.22e-15,49;UBERON:0002240,1.27e-15,6;UBERON:0005174,1.27e-15,6;UBERON:0001137,1.27e-15,6;UBERON:0000956,2.10e-15,21;UBERON:0001869,2.10e-15,21;UBERON:0000203,2.10e-15,21;UBERON:0010314,1.22e-13,92;UBERON:0002257,3.21e-12,3;UBERON:0002420,4.14e-11,8;UBERON:0007245,4.14e-11,8;UBERON:0010009,4.14e-11,8;UBERON:0010011,4.14e-11,8;UBERON:0000454,4.14e-11,8;UBERON:0000025,2.91e-10,114;UBERON:0004111,2.47e-09,122;UBERON:0002256,3.21e-08,2;UBERON:0002950,3.43e-08,4;UBERON:0001891,3.43e-08,4;UBERON:0009616,3.43e-08,4;UBERON:0010286,3.43e-08,4;UBERON:0003076,1.12e-07,12;UBERON:0003057,1.12e-07,12;UBERON:0000369,3.38e-07,5;UBERON:0002435,3.38e-07,5;UBERON:0000204,3.38e-07,5;UBERON:0010082,3.38e-07,5;UBERON:0011216,8.62e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0,1.99955689082663,2.65042249141936,3.79721477566358,4.88811902193005,1.83843757322004,0,0.510749352340751,0.46081959976873,2.2420668914133,2.19570344645783,0,0,2.25105044012672,1.06958773443767,3.83017161115768,2.56269025438385,3.72798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,1.04853447583376,0.915001205637253,16.3350657746724,0.695297280769106,1.02286182932132,0.20778804455956,0.973447578406546,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.76195141904306,1.71868654031819,1.03111909406213,0.685082519770642,2.2661816921691,1.35004500046361,0.45032120322422,0,1.55328093525546,0,0,0.170733605754134,0,0.628839487883947,0,0.222246727801615,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.655490552289177,0.512201219238954,0.402048282689293,0,0.115884325944855,0.77163688185482,0,0.294397840268795,0.342869252385415,0.354951612318675,0.715308569841963,0,0.282328141245992,0.423073039458382,0.548783918618318,0.789209134313529,0.543216455383447,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0,0.385813221962283,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0,0 | |||
|short_description=p@chr2:32178983..32179012,- | |||
}} |
Latest revision as of 01:15, 5 August 2015
Short description: | p@chr2:32178983..32179012, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:32178983..32179012, - |
Coexpression cluster: | MCL_coexpression_mm9:1237 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.14e-33 | 23 |
neuroblast (sensu Vertebrata) | 2.14e-33 | 23 |
neuron | 2.05e-22 | 33 |
neuronal stem cell | 2.05e-22 | 33 |
neuroblast | 2.05e-22 | 33 |
electrically signaling cell | 2.05e-22 | 33 |
electrically responsive cell | 1.59e-18 | 39 |
electrically active cell | 1.59e-18 | 39 |
neural cell | 1.56e-16 | 43 |
ectodermal cell | 4.30e-16 | 44 |
neurectodermal cell | 4.30e-16 | 44 |
neuron of the ventral spinal cord | 3.21e-12 | 3 |
hippocampal neuron | 5.33e-12 | 3 |
granule cell | 6.31e-12 | 3 |
embryonic cell | 4.85e-09 | 70 |
neuron of the dorsal spinal cord | 3.21e-08 | 2 |