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FFCP PHASE1:Mm9::chr10:63552989..63553010,-: Difference between revisions

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(Created page with "{{FFCP |id=chr10:63552989..63553010,- |short_description=p2@Lrrtm3 |description=CAGE_peak_2_at_Lrrtm3_5end |association_with_transcript=0bp_to_ENSMUST00000133588,ENSMUST00...")
 
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{{FFCP
{{FFCP
|id=chr10:63552989..63553010,-
|DHSsupport=NA
|short_description=p2@Lrrtm3
|DPIdataset=NA
|description=CAGE_peak_2_at_Lrrtm3_5end
|association_with_transcript=0bp_to_ENSMUST00000133588,ENSMUST00000148712,NM_178678,uc007fkk.1,uc007fkl.1_5end
|EntrezGene=216028
|EntrezGene=216028
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=D3YV09,Q8BZ81
|UniProt=D3YV09,Q8BZ81
|association_with_transcript=0bp_to_ENSMUST00000133588,ENSMUST00000148712,NM_178678,uc007fkk.1,uc007fkl.1_5end
|cluster_id=chr10:63552989..63553010,-
|description=CAGE_peak_2_at_Lrrtm3_5end
|id=chr10:63552989..63553010,-
|ontology_enrichment_celltype=CL:0000540!2.06e-14!33;CL:0000047!2.06e-14!33;CL:0000031!2.06e-14!33;CL:0000404!2.06e-14!33;CL:0000117!4.42e-14!23;CL:0000337!4.42e-14!23;CL:0000221!2.42e-12!44;CL:0000133!2.42e-12!44;CL:0002319!5.83e-12!43;CL:0000393!6.16e-10!39;CL:0000211!6.16e-10!39;CL:0000055!3.77e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.92e-21,23;CL:0000337,3.92e-21,23;CL:0000540,3.97e-15,33;CL:0000047,3.97e-15,33;CL:0000031,3.97e-15,33;CL:0000404,3.97e-15,33;CL:0000393,1.15e-11,39;CL:0000211,1.15e-11,39;CL:0000221,1.90e-10,44;CL:0000133,1.90e-10,44;CL:0002319,6.39e-10,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.80e-30!75;UBERON:0001016!3.80e-30!75;UBERON:0001017!7.21e-30!73;UBERON:0005743!7.21e-30!73;UBERON:0004121!6.52e-26!102;UBERON:0000924!6.52e-26!102;UBERON:0006601!6.52e-26!102;UBERON:0000033!1.16e-25!63;UBERON:0001049!5.77e-25!52;UBERON:0005068!5.77e-25!52;UBERON:0006241!5.77e-25!52;UBERON:0007135!5.77e-25!52;UBERON:0000955!5.56e-24!50;UBERON:0006238!5.56e-24!50;UBERON:0002346!3.02e-23!71;UBERON:0003075!3.02e-23!71;UBERON:0007284!3.02e-23!71;UBERON:0002616!3.22e-23!49;UBERON:0003056!1.90e-21!49;UBERON:0002020!1.15e-20!34;UBERON:0003080!5.96e-20!40;UBERON:0002780!3.16e-19!39;UBERON:0001890!3.16e-19!39;UBERON:0006240!3.16e-19!39;UBERON:0002791!1.94e-17!29;UBERON:0003528!1.94e-17!29;UBERON:0001893!1.94e-17!29;UBERON:0007811!2.79e-13!86;UBERON:0000956!1.17e-12!21;UBERON:0001869!1.17e-12!21;UBERON:0000203!1.17e-12!21;UBERON:0000153!2.53e-12!94;UBERON:0002619!2.07e-10!17;UBERON:0002021!1.23e-08!10;UBERON:0000411!1.23e-08!10;UBERON:0001950!1.23e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.32e-35,54;UBERON:0001017,4.94e-33,73;UBERON:0001049,6.02e-33,52;UBERON:0005068,6.02e-33,52;UBERON:0006241,6.02e-33,52;UBERON:0007135,6.02e-33,52;UBERON:0001016,1.02e-31,75;UBERON:0002020,3.98e-30,34;UBERON:0002346,5.86e-28,64;UBERON:0003075,5.86e-28,64;UBERON:0007284,5.86e-28,64;UBERON:0000955,1.00e-27,47;UBERON:0006238,1.00e-27,47;UBERON:0002616,1.49e-26,46;UBERON:0004121,9.13e-25,95;UBERON:0000924,9.13e-25,95;UBERON:0006601,9.13e-25,95;UBERON:0003528,9.32e-25,29;UBERON:0002791,9.32e-25,29;UBERON:0001893,9.32e-25,29;UBERON:0010371,6.33e-24,73;UBERON:0003080,1.30e-23,40;UBERON:0002780,1.72e-22,39;UBERON:0001890,1.72e-22,39;UBERON:0006240,1.72e-22,39;UBERON:0003056,1.07e-19,49;UBERON:0000956,8.11e-17,21;UBERON:0001869,8.11e-17,21;UBERON:0000203,8.11e-17,21;UBERON:0010314,4.60e-16,92;UBERON:0002021,1.72e-13,10;UBERON:0000411,1.72e-13,10;UBERON:0001950,1.72e-13,10;UBERON:0002619,4.17e-13,17;UBERON:0003076,1.40e-09,12;UBERON:0003057,1.40e-09,12;UBERON:0002420,4.35e-09,8;UBERON:0007245,4.35e-09,8;UBERON:0010009,4.35e-09,8;UBERON:0010011,4.35e-09,8;UBERON:0000454,4.35e-09,8;UBERON:0000025,4.70e-08,114;UBERON:0002240,1.89e-07,6;UBERON:0005174,1.89e-07,6;UBERON:0001137,1.89e-07,6;UBERON:0004111,2.65e-07,122
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,3.43937983461316,10.0508286061686,5.70448263155561,0,0,0,0,0,0.898800331555214,0.768436610643109,4.45865332926454,3.24014251996058,2.3135745748652,11.7116903605559,11.0434270475807,2.32732518508413,0.862609239164127,3.67687514644008,26.4278114398533,14.8117312178818,18.4327839907492,2.50583946687368,2.92760459527711,4.68822033501084,20.6595419261022,11.2552522006336,10.0846843532695,12.9636577608414,14.3795397607094,7.08317894136142,0.302904773332736,0.906858721281426,0,0,0,0,0,0,1.12355536105401,0,0,0,1.40843419776681,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.520455980298408,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,42.1604347696628,64.7190324053576,0.255457055208591,0,0,0,17.5255048103643,16.9275223042892,6.91098936620754,29.2024857923024,27.3615539343454,14.7529511637288,18.9822277789276,0.101839363850316,0.124406970610093,0.252722758433675,1.05220927943237,0.130120442962704,0.919608417733892,0.540186389416048,0.90422890701429,0.884474488967262,0.640568601424249,0.749613796477831,1.29351685369508,0,0.756424320671277,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0.329119699826961,0,0.324275238183423,0,0.219550115291051,0.134206418760372,12.8276868624118,4.11618449517138,0,0,0.426576501070468,0.232236671860439,0.77320476793256,0.80673409849337,0,0.760902504450237,0,0.658795818896044,0,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0.651859905768103,0.509235257325564,0.234690248288502,0.335012514883631,0,0,0.630540576424764,0.664394068946325,0.478364305972461,0,0,0,0,0,0,0,11.3990918891332,12.1900154055891,0,0,1.26203287766503,0,0.861693590931196,0.955875191810208,0.668396022247182,2.26461224631066,0.404810701674894,0.584511715822624,0.395287777946524,18.315315036043,0.567760340833074,0.178065603667255,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.987294123612726,2.43571959291679,0,0,0,0.32977250588296,0.322928853391811,0.120625849856312,0,0,0.291480836629851,11.1255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.406638934253697,1.51207477150522,1.25452977608681,0.655087691238533,0.404593039154462,0.661227645802687,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.330916980914195,1.16670713006429,0.129159823477731,0.675824501963113,0.469428954583016,0,0,0,0,0,0.810900861160657,0.513554785824136,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0,0,0,0,16.3778034358949,22.0956113523445,22.3429250241365,32.3083982806133,23.2928056722018,29.4603619981983,17.550585006027,14.8605997063993,20.8445508132734,17.0860902878101,0.207574695168353,0.399024873401031,0.170733605754134,0.972426868273176,1.67690530102386,0.919217542250071,0.888986911206461,1.44224540067226,0.962757628775446,1.26348605881899,1.77435509923168,1.32038438970253,2.34103768674706,1.21647789569252,1.66562859971278,2.38146845641537,1.0429589335037,0.77163688185482,2.47251540481984,1.17759136107518,2.05721551431249,1.4198064492747,0.715308569841963,1.30811774969096,1.88218760830661,1.18460451048347,2.0122077016005,1.57841826862706,1.49384525230448,0.561142271657738,1.89816028998679,1.18205378850676,3.27384834535751,1.85924209423159,0.771626443924566,0.999242311751784,0.233931608445408,0.214871054048298,0.57386499620653,0,0.463735671240843
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,3.43937983461316,10.0508286061686,5.70448263155561,0,0,0,0,0,0.898800331555214,0.768436610643109,4.45865332926454,3.24014251996058,2.3135745748652,11.7116903605559,11.0434270475807,2.32732518508413,0.862609239164127,3.67687514644008,26.4278114398533,14.8117312178818,18.4327839907492,2.50583946687368,2.92760459527711,4.68822033501084,20.6595419261022,11.2552522006336,10.0846843532695,12.9636577608414,14.3795397607094,7.08317894136142,0.302904773332736,0.906858721281426,0,0,0,0,0,0,1.12355536105401,0,0,0,1.40843419776681,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.520455980298408,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,42.1604347696628,64.7190324053576,0.255457055208591,0,0,0,17.5255048103643,16.9275223042892,6.91098936620754,29.2024857923024,27.3615539343454,14.7529511637288,18.9822277789276,0.101839363850316,0.124406970610093,0.252722758433675,1.05220927943237,0.130120442962704,0.919608417733892,0.540186389416048,0.90422890701429,0.884474488967262,0.640568601424249,0.749613796477831,1.29351685369508,0,0.756424320671277,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0.329119699826961,0,0.324275238183423,0,0.219550115291051,0.134206418760372,12.8276868624118,4.11618449517138,0,0,0.426576501070468,0.232236671860439,0.77320476793256,0.80673409849337,0,0.760902504450237,0,0.658795818896044,0,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0.651859905768103,0.509235257325564,0.234690248288502,0.335012514883631,0,0,0.630540576424764,0.664394068946325,0.478364305972461,0,0,0,0,0,0,0,11.3990918891332,12.1900154055891,0,0,1.26203287766503,0,0.861693590931196,0.955875191810208,0.668396022247182,2.26461224631066,0.404810701674894,0.584511715822624,0.395287777946524,18.315315036043,0.567760340833074,0.178065603667255,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.987294123612726,2.43571959291679,0,0,0,0.32977250588296,0.322928853391811,0.120625849856312,0,0,0.291480836629851,11.1255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.406638934253697,1.51207477150522,1.25452977608681,0.655087691238533,0.404593039154462,0.661227645802687,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.330916980914195,1.16670713006429,0.129159823477731,0.675824501963113,0.469428954583016,0,0,0,0,0,0.810900861160657,0.513554785824136,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0,0,0,0,16.3778034358949,22.0956113523445,22.3429250241365,32.3083982806133,23.2928056722018,29.4603619981983,17.550585006027,14.8605997063993,20.8445508132734,17.0860902878101,0.207574695168353,0.399024873401031,0.170733605754134,0.972426868273176,1.67690530102386,0.919217542250071,0.888986911206461,1.44224540067226,0.962757628775446,1.26348605881899,1.77435509923168,1.32038438970253,2.34103768674706,1.21647789569252,1.66562859971278,2.38146845641537,1.0429589335037,0.77163688185482,2.47251540481984,1.17759136107518,2.05721551431249,1.4198064492747,0.715308569841963,1.30811774969096,1.88218760830661,1.18460451048347,2.0122077016005,1.57841826862706,1.49384525230448,0.561142271657738,1.89816028998679,1.18205378850676,3.27384834535751,1.85924209423159,0.771626443924566,0.999242311751784,0.233931608445408,0.214871054048298,0.57386499620653,0,0.463735671240843
|short_description=p2@Lrrtm3
}}
}}

Latest revision as of 05:03, 26 September 2015

Short description:p2@Lrrtm3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrrtm3_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_ENSMUST00000133588, ENSMUST00000148712, NM_178678, uc007fkk.1, uc007fkl.1_5end
EntrezGene:Lrrtm3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lrrtm3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B242.16
cerebellum, neonate N30.CNhs11135.1395-42I264.72
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.53
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D529.20
cortex, neonate N30.CNhs11107.1392-42F227.36
diencephalon, adult.CNhs10482.20-12F214.75
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E812.83
hippocampus, neonate N00.CNhs11228.627-43G14.12
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A312.19
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I918.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D732.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.92e-2123
neuroblast (sensu Vertebrata)3.92e-2123
neuron3.97e-1533
neuronal stem cell3.97e-1533
neuroblast3.97e-1533
electrically signaling cell3.97e-1533
electrically responsive cell1.15e-1139
electrically active cell1.15e-1139
ectodermal cell1.90e-1044
neurectodermal cell1.90e-1044
neural cell6.39e-1043

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.32e-3554
central nervous system4.94e-3373
neural tube6.02e-3352
neural rod6.02e-3352
future spinal cord6.02e-3352
neural keel6.02e-3352
nervous system1.02e-3175
gray matter3.98e-3034
neurectoderm5.86e-2864
neural plate5.86e-2864
presumptive neural plate5.86e-2864
brain1.00e-2747
future brain1.00e-2747
regional part of brain1.49e-2646
ectoderm-derived structure9.13e-2595
ectoderm9.13e-2595
presumptive ectoderm9.13e-2595
brain grey matter9.32e-2529
regional part of telencephalon9.32e-2529
telencephalon9.32e-2529
ecto-epithelium6.33e-2473
anterior neural tube1.30e-2340
regional part of forebrain1.72e-2239
forebrain1.72e-2239
future forebrain1.72e-2239
pre-chordal neural plate1.07e-1949
cerebral cortex8.11e-1721
cerebral hemisphere8.11e-1721
pallium8.11e-1721
structure with developmental contribution from neural crest4.60e-1692
occipital lobe1.72e-1310
visual cortex1.72e-1310
neocortex1.72e-1310
regional part of cerebral cortex4.17e-1317
posterior neural tube1.40e-0912
chordal neural plate1.40e-0912
basal ganglion4.35e-098
nuclear complex of neuraxis4.35e-098
aggregate regional part of brain4.35e-098
collection of basal ganglia4.35e-098
cerebral subcortex4.35e-098
tube4.70e-08114
spinal cord1.89e-076
dorsal region element1.89e-076
dorsum1.89e-076
anatomical conduit2.65e-07122
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