FFCP PHASE1:Mm9::chr4:49072338..49072422,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=272031|HGNC=|MCL_coexpression_id=13|UniProt=Q8BFZ2|association_with_transcript=4bp_to_NM_178756,uc008svo.1,uc008svp.1,uc012dea.1_5end|description=CAGE_peak_2_at_E130309F12Rik_5end|id=chr4:49072338..49072422,+|ontology_enrichment_celltype=CL:0000117!2.61e-14!23;CL:0000337!2.61e-14!23;CL:0000540!1.45e-08!33;CL:0000047!1.45e-08!33;CL:0000031!1.45e-08!33;CL:0000404!1.45e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.91e-17,23;CL:0000337,2.91e-17,23;CL:0000540,4.59e-09,33;CL:0000047,4.59e-09,33;CL:0000031,4.59e-09,33;CL:0000404,4.59e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.29e-21!52;UBERON:0005068!7.29e-21!52;UBERON:0006241!7.29e-21!52;UBERON:0007135!7.29e-21!52;UBERON:0003056!1.11e-20!49;UBERON:0002346!7.08e-20!71;UBERON:0003075!7.08e-20!71;UBERON:0007284!7.08e-20!71;UBERON:0000033!2.32e-19!63;UBERON:0002020!9.28e-19!34;UBERON:0000955!2.80e-18!50;UBERON:0006238!2.80e-18!50;UBERON:0001017!3.14e-18!73;UBERON:0005743!3.14e-18!73;UBERON:0002616!8.46e-18!49;UBERON:0003080!9.12e-18!40;UBERON:0002780!3.73e-17!39;UBERON:0001890!3.73e-17!39;UBERON:0006240!3.73e-17!39;UBERON:0000073!6.57e-17!75;UBERON:0001016!6.57e-17!75;UBERON:0002791!4.87e-15!29;UBERON:0003528!4.87e-15!29;UBERON:0001893!4.87e-15!29;UBERON:0004121!4.46e-14!102;UBERON:0000924!4.46e-14!102;UBERON:0006601!4.46e-14!102;UBERON:0000956!2.74e-10!21;UBERON:0001869!2.74e-10!21;UBERON:0000203!2.74e-10!21;UBERON:0007811!1.60e-08!86;UBERON:0002619!5.63e-08!17;UBERON:0000153!5.97e-08!94;UBERON:0002021!1.69e-07!10;UBERON:0000411!1.69e-07!10;UBERON:0001950!1.69e-07!10;UBERON:0000468!3.98e-07!333;UBERON:0000025!5.16e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.20e-25,64;UBERON:0003075,2.20e-25,64;UBERON:0007284,2.20e-25,64;UBERON:0000073,4.41e-25,54;UBERON:0003056,1.69e-24,49;UBERON:0001049,2.60e-24,52;UBERON:0005068,2.60e-24,52;UBERON:0006241,2.60e-24,52;UBERON:0007135,2.60e-24,52;UBERON:0002020,2.16e-23,34;UBERON:0003080,2.42e-21,40;UBERON:0002780,1.37e-20,39;UBERON:0001890,1.37e-20,39;UBERON:0006240,1.37e-20,39;UBERON:0001017,6.69e-20,73;UBERON:0000955,9.55e-20,47;UBERON:0006238,9.55e-20,47;UBERON:0010371,1.57e-19,73;UBERON:0002616,3.61e-19,46;UBERON:0001016,8.54e-19,75;UBERON:0003528,8.93e-19,29;UBERON:0002791,8.93e-19,29;UBERON:0001893,8.93e-19,29;UBERON:0004121,5.86e-17,95;UBERON:0000924,5.86e-17,95;UBERON:0006601,5.86e-17,95;UBERON:0010314,1.95e-15,92;UBERON:0000956,6.90e-13,21;UBERON:0001869,6.90e-13,21;UBERON:0000203,6.90e-13,21;UBERON:0002619,5.12e-10,17;UBERON:0002021,7.07e-09,10;UBERON:0000411,7.07e-09,10;UBERON:0001950,7.07e-09,10;UBERON:0000025,2.99e-07,114;UBERON:0002420,3.79e-07,8;UBERON:0007245,3.79e-07,8;UBERON:0010009,3.79e-07,8;UBERON:0010011,3.79e-07,8;UBERON:0000454,3.79e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4918740683093,30.6814767977779,25.9870875437533,0,0,0,0,0,1.19840044207362,0.768436610643109,12.7538223139428,14.9856591548177,14.9330722559481,25.7085885963423,38.6519946665324,12.0040983230655,7.76348315247715,10.1114066527102,4.40463523997555,5.61824287574826,8.1411462625809,31.7845953429767,28.4526571603494,24.4829284161677,5.30447698102624,9.56696437053856,9.93188610549266,44.7835449919975,43.7081060053246,41.7534758648673,0,0,2.31891590961342,0,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0.867426633830679,0.913396434936424,0.691846491768175,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,1.86391761218122,0.585561594023094,0.83778682725382,0.255457055208591,0,0,0,13.9305294646485,68.625090422794,34.6806011831506,17.0347833788431,14.3200656104985,15.584103341967,28.2299797737898,0.203678727700633,0,0,0.210441855886474,1.43132487258974,5.0578462975364,7.92273371143537,9.79581315932148,12.3146063463903,16.2704424761759,9.27647073141315,1.81092359517311,0,0.378212160335639,1.23165786914764,1.31517439456545,1.94633074457919,0,1.23469281844766,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.900310307305074,1.18372367792605,1.77087808572663,1.23413690309903,3.0229412817553,1.87791380979733,3.97002164048376,1.48103864922132,0.164167464079095,0.162137619091711,0.146199987425332,0,0,13.4585567081041,43.0141279745409,0.330418782983798,0,0.853153002140936,0.928946687441754,0.515469845288373,0.403367049246685,0,0.380451252225118,0,0.164698954724011,0.754005626400808,0.795825888164603,0.779856348476481,0,0,0.199141273254367,0.569003702859245,1.37098215131675,1.1270773567308,1.22190796707189,1.74557238450863,0.911765658574141,1.3279672796094,0.295220295959204,1.255989822731,0.987177311374404,0.592905254174298,0,0.393117990226406,0,0,0,0,0.575392274901621,0.972811360650212,2.74561413188081,2.87536413054709,5.95425516269605,2.18426371180192,1.76805214562978,0,1.4473305640901,0,0.947457058852424,0.325929952884052,0.848725428875941,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,8.0275294993896,8.67366480782304,0,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,0.790575555893047,7.71171159412337,0,0.712262414669021,0.162886959353576,0.164970122972535,1.32745138339963,0.485561272309963,0.604647113929502,2.07465587731488,1.77181135728464,5.22639751504677,4.39328098385976,3.27180356529755,2.85197902707777,2.21225730555071,2.10837217149998,2.06271086496374,2.38307724027652,1.8006109403131,0.776152102696527,1.28602221018955,2.48276327099183,2.31879462882692,2.79733335023606,3.95804433848979,0,0,0,0,0.807322133479528,0.120625849856312,0,0,0,12.0526446306831,0.170870880797853,1.857481811669,0.370389054739423,0,0.410082683163076,0.457556346413045,0,0,0,0,0.632671987162271,1.21991680276109,0.648032044930808,0.209088296014469,0.218362563746178,0.269728692769641,0.41326727862668,0,0,0,0,0.149516546043979,0,1.36115831840833,0.258319646955462,0.168956125490778,1.05621514781179,1.43224823328345,0.629156066554265,0,0.288030006257865,0,0.405450430580328,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,32.1908550291728,33.1434170285167,36.092417346682,31.1054260042075,13.0165678756422,12.0863023582352,10.8003600037089,12.158672487054,15.8599843144472,12.9440077937955,1.03787347584177,2.79317411380722,5.9756762013947,5.59145449257076,5.03071590307158,2.20612210140017,8.00088220085815,6.18105171716683,6.4183841918363,6.57012750585873,9.63221339582911,6.41329560712659,5.05664140337365,4.67383612555546,5.22662767496081,5.23923060411381,6.37363792696705,5.78727661391115,5.35711671044299,5.88795680537589,5.48590803816665,7.27650805253284,8.10683045820891,5.95920308192547,5.55245344450451,7.10762706290083,5.3049112133104,7.10288220882176,6.24698923690964,6.17256498823512,7.23673610557462,5.71325997778268,4.91077251803627,6.04253680625267,3.2794123866794,16.7373087218424,6.31615342802603,4.94203424311086,3.06061331310149,1.76473135295612,0.231867835620421|short_description=p2@E130309F12Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=272031 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BFZ2 | |||
|association_with_transcript=4bp_to_NM_178756,uc008svo.1,uc008svp.1,uc012dea.1_5end | |||
|cluster_id=chr4:49072338..49072422,+ | |||
|description=CAGE_peak_2_at_E130309F12Rik_5end | |||
|id=chr4:49072338..49072422,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.61e-14!23;CL:0000337!2.61e-14!23;CL:0000540!1.45e-08!33;CL:0000047!1.45e-08!33;CL:0000031!1.45e-08!33;CL:0000404!1.45e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.91e-17,23;CL:0000337,2.91e-17,23;CL:0000540,4.59e-09,33;CL:0000047,4.59e-09,33;CL:0000031,4.59e-09,33;CL:0000404,4.59e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.29e-21!52;UBERON:0005068!7.29e-21!52;UBERON:0006241!7.29e-21!52;UBERON:0007135!7.29e-21!52;UBERON:0003056!1.11e-20!49;UBERON:0002346!7.08e-20!71;UBERON:0003075!7.08e-20!71;UBERON:0007284!7.08e-20!71;UBERON:0000033!2.32e-19!63;UBERON:0002020!9.28e-19!34;UBERON:0000955!2.80e-18!50;UBERON:0006238!2.80e-18!50;UBERON:0001017!3.14e-18!73;UBERON:0005743!3.14e-18!73;UBERON:0002616!8.46e-18!49;UBERON:0003080!9.12e-18!40;UBERON:0002780!3.73e-17!39;UBERON:0001890!3.73e-17!39;UBERON:0006240!3.73e-17!39;UBERON:0000073!6.57e-17!75;UBERON:0001016!6.57e-17!75;UBERON:0002791!4.87e-15!29;UBERON:0003528!4.87e-15!29;UBERON:0001893!4.87e-15!29;UBERON:0004121!4.46e-14!102;UBERON:0000924!4.46e-14!102;UBERON:0006601!4.46e-14!102;UBERON:0000956!2.74e-10!21;UBERON:0001869!2.74e-10!21;UBERON:0000203!2.74e-10!21;UBERON:0007811!1.60e-08!86;UBERON:0002619!5.63e-08!17;UBERON:0000153!5.97e-08!94;UBERON:0002021!1.69e-07!10;UBERON:0000411!1.69e-07!10;UBERON:0001950!1.69e-07!10;UBERON:0000468!3.98e-07!333;UBERON:0000025!5.16e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.20e-25,64;UBERON:0003075,2.20e-25,64;UBERON:0007284,2.20e-25,64;UBERON:0000073,4.41e-25,54;UBERON:0003056,1.69e-24,49;UBERON:0001049,2.60e-24,52;UBERON:0005068,2.60e-24,52;UBERON:0006241,2.60e-24,52;UBERON:0007135,2.60e-24,52;UBERON:0002020,2.16e-23,34;UBERON:0003080,2.42e-21,40;UBERON:0002780,1.37e-20,39;UBERON:0001890,1.37e-20,39;UBERON:0006240,1.37e-20,39;UBERON:0001017,6.69e-20,73;UBERON:0000955,9.55e-20,47;UBERON:0006238,9.55e-20,47;UBERON:0010371,1.57e-19,73;UBERON:0002616,3.61e-19,46;UBERON:0001016,8.54e-19,75;UBERON:0003528,8.93e-19,29;UBERON:0002791,8.93e-19,29;UBERON:0001893,8.93e-19,29;UBERON:0004121,5.86e-17,95;UBERON:0000924,5.86e-17,95;UBERON:0006601,5.86e-17,95;UBERON:0010314,1.95e-15,92;UBERON:0000956,6.90e-13,21;UBERON:0001869,6.90e-13,21;UBERON:0000203,6.90e-13,21;UBERON:0002619,5.12e-10,17;UBERON:0002021,7.07e-09,10;UBERON:0000411,7.07e-09,10;UBERON:0001950,7.07e-09,10;UBERON:0000025,2.99e-07,114;UBERON:0002420,3.79e-07,8;UBERON:0007245,3.79e-07,8;UBERON:0010009,3.79e-07,8;UBERON:0010011,3.79e-07,8;UBERON:0000454,3.79e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4918740683093,30.6814767977779,25.9870875437533,0,0,0,0,0,1.19840044207362,0.768436610643109,12.7538223139428,14.9856591548177,14.9330722559481,25.7085885963423,38.6519946665324,12.0040983230655,7.76348315247715,10.1114066527102,4.40463523997555,5.61824287574826,8.1411462625809,31.7845953429767,28.4526571603494,24.4829284161677,5.30447698102624,9.56696437053856,9.93188610549266,44.7835449919975,43.7081060053246,41.7534758648673,0,0,2.31891590961342,0,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0.867426633830679,0.913396434936424,0.691846491768175,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,1.86391761218122,0.585561594023094,0.83778682725382,0.255457055208591,0,0,0,13.9305294646485,68.625090422794,34.6806011831506,17.0347833788431,14.3200656104985,15.584103341967,28.2299797737898,0.203678727700633,0,0,0.210441855886474,1.43132487258974,5.0578462975364,7.92273371143537,9.79581315932148,12.3146063463903,16.2704424761759,9.27647073141315,1.81092359517311,0,0.378212160335639,1.23165786914764,1.31517439456545,1.94633074457919,0,1.23469281844766,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.900310307305074,1.18372367792605,1.77087808572663,1.23413690309903,3.0229412817553,1.87791380979733,3.97002164048376,1.48103864922132,0.164167464079095,0.162137619091711,0.146199987425332,0,0,13.4585567081041,43.0141279745409,0.330418782983798,0,0.853153002140936,0.928946687441754,0.515469845288373,0.403367049246685,0,0.380451252225118,0,0.164698954724011,0.754005626400808,0.795825888164603,0.779856348476481,0,0,0.199141273254367,0.569003702859245,1.37098215131675,1.1270773567308,1.22190796707189,1.74557238450863,0.911765658574141,1.3279672796094,0.295220295959204,1.255989822731,0.987177311374404,0.592905254174298,0,0.393117990226406,0,0,0,0,0.575392274901621,0.972811360650212,2.74561413188081,2.87536413054709,5.95425516269605,2.18426371180192,1.76805214562978,0,1.4473305640901,0,0.947457058852424,0.325929952884052,0.848725428875941,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,8.0275294993896,8.67366480782304,0,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,0.790575555893047,7.71171159412337,0,0.712262414669021,0.162886959353576,0.164970122972535,1.32745138339963,0.485561272309963,0.604647113929502,2.07465587731488,1.77181135728464,5.22639751504677,4.39328098385976,3.27180356529755,2.85197902707777,2.21225730555071,2.10837217149998,2.06271086496374,2.38307724027652,1.8006109403131,0.776152102696527,1.28602221018955,2.48276327099183,2.31879462882692,2.79733335023606,3.95804433848979,0,0,0,0,0.807322133479528,0.120625849856312,0,0,0,12.0526446306831,0.170870880797853,1.857481811669,0.370389054739423,0,0.410082683163076,0.457556346413045,0,0,0,0,0.632671987162271,1.21991680276109,0.648032044930808,0.209088296014469,0.218362563746178,0.269728692769641,0.41326727862668,0,0,0,0,0.149516546043979,0,1.36115831840833,0.258319646955462,0.168956125490778,1.05621514781179,1.43224823328345,0.629156066554265,0,0.288030006257865,0,0.405450430580328,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,32.1908550291728,33.1434170285167,36.092417346682,31.1054260042075,13.0165678756422,12.0863023582352,10.8003600037089,12.158672487054,15.8599843144472,12.9440077937955,1.03787347584177,2.79317411380722,5.9756762013947,5.59145449257076,5.03071590307158,2.20612210140017,8.00088220085815,6.18105171716683,6.4183841918363,6.57012750585873,9.63221339582911,6.41329560712659,5.05664140337365,4.67383612555546,5.22662767496081,5.23923060411381,6.37363792696705,5.78727661391115,5.35711671044299,5.88795680537589,5.48590803816665,7.27650805253284,8.10683045820891,5.95920308192547,5.55245344450451,7.10762706290083,5.3049112133104,7.10288220882176,6.24698923690964,6.17256498823512,7.23673610557462,5.71325997778268,4.91077251803627,6.04253680625267,3.2794123866794,16.7373087218424,6.31615342802603,4.94203424311086,3.06061331310149,1.76473135295612,0.231867835620421 | |||
|short_description=p2@E130309F12Rik | |||
}} |
Latest revision as of 01:58, 27 September 2015
Short description: | p2@E130309F12Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_E130309F12Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 4bp_to_NM_178756, uc008svo.1, uc008svp.1, uc012dea.1_5end |
EntrezGene: | E130309F12Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.91e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.91e-17 | 23 |
neuron | 4.59e-09 | 33 |
neuronal stem cell | 4.59e-09 | 33 |
neuroblast | 4.59e-09 | 33 |
electrically signaling cell | 4.59e-09 | 33 |