FFCP PHASE1:Mm9::chr5:116357457..116357517,+: Difference between revisions
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{{FFCP|EntrezGene=12704|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128702_5end|description=CAGE_peak_2_at_Cit_5end|id=chr5:116357457..116357517,+|ontology_enrichment_celltype=CL:0000117!2.45e-11!23;CL:0000337!2.45e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.63e-15,23;CL:0000337,9.63e-15,23;CL:0000540,1.12e-08,33;CL:0000047,1.12e-08,33;CL:0000031,1.12e-08,33;CL:0000404,1.12e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.10e-21!52;UBERON:0005068!1.10e-21!52;UBERON:0006241!1.10e-21!52;UBERON:0007135!1.10e-21!52;UBERON:0000033!2.06e-21!63;UBERON:0002346!4.07e-21!71;UBERON:0003075!4.07e-21!71;UBERON:0007284!4.07e-21!71;UBERON:0001017!4.79e-21!73;UBERON:0005743!4.79e-21!73;UBERON:0000955!1.13e-20!50;UBERON:0006238!1.13e-20!50;UBERON:0000073!2.63e-20!75;UBERON:0001016!2.63e-20!75;UBERON:0002616!5.34e-20!49;UBERON:0004121!4.59e-18!102;UBERON:0000924!4.59e-18!102;UBERON:0006601!4.59e-18!102;UBERON:0002020!5.02e-18!34;UBERON:0003056!3.17e-17!49;UBERON:0003080!1.74e-15!40;UBERON:0002791!8.19e-15!29;UBERON:0003528!8.19e-15!29;UBERON:0001893!8.19e-15!29;UBERON:0002780!9.64e-15!39;UBERON:0001890!9.64e-15!39;UBERON:0006240!9.64e-15!39;UBERON:0002619!2.15e-10!17;UBERON:0007811!3.08e-10!86;UBERON:0000956!5.90e-10!21;UBERON:0001869!5.90e-10!21;UBERON:0000203!5.90e-10!21;UBERON:0000025!1.16e-09!114;UBERON:0004111!2.79e-09!122;UBERON:0000153!7.89e-09!94;UBERON:0002021!1.35e-08!10;UBERON:0000411!1.35e-08!10;UBERON:0001950!1.35e-08!10;UBERON:0003076!5.92e-07!12;UBERON:0003057!5.92e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.62e-27,54;UBERON:0001049,6.22e-25,52;UBERON:0005068,6.22e-25,52;UBERON:0006241,6.22e-25,52;UBERON:0007135,6.22e-25,52;UBERON:0001017,4.55e-24,73;UBERON:0002020,2.82e-23,34;UBERON:0001016,4.53e-23,75;UBERON:0002346,1.24e-21,64;UBERON:0003075,1.24e-21,64;UBERON:0007284,1.24e-21,64;UBERON:0000955,1.05e-19,47;UBERON:0006238,1.05e-19,47;UBERON:0002616,1.04e-18,46;UBERON:0004121,3.17e-18,95;UBERON:0000924,3.17e-18,95;UBERON:0006601,3.17e-18,95;UBERON:0003528,5.85e-18,29;UBERON:0002791,5.85e-18,29;UBERON:0001893,5.85e-18,29;UBERON:0010371,1.67e-17,73;UBERON:0003080,8.24e-16,40;UBERON:0002780,1.03e-14,39;UBERON:0001890,1.03e-14,39;UBERON:0006240,1.03e-14,39;UBERON:0003056,1.44e-14,49;UBERON:0002021,6.22e-14,10;UBERON:0000411,6.22e-14,10;UBERON:0001950,6.22e-14,10;UBERON:0010314,1.54e-11,92;UBERON:0002619,2.22e-11,17;UBERON:0003076,3.42e-10,12;UBERON:0003057,3.42e-10,12;UBERON:0000956,3.65e-10,21;UBERON:0001869,3.65e-10,21;UBERON:0000203,3.65e-10,21;UBERON:0002420,8.46e-10,8;UBERON:0007245,8.46e-10,8;UBERON:0010009,8.46e-10,8;UBERON:0010011,8.46e-10,8;UBERON:0000454,8.46e-10,8;UBERON:0000025,1.18e-08,114;UBERON:0002240,4.33e-08,6;UBERON:0005174,4.33e-08,6;UBERON:0001137,4.33e-08,6;UBERON:0004111,2.21e-07,122;UBERON:0001948,8.26e-07,5;UBERON:0002315,8.26e-07,5|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.58328969722285,0.839918529752175,0,0,0,0,0,0,0,2.83243045203437,5.81890077199236,5.07065122804943,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0.405017814995072,0.210324961351382,24.8516356431309,19.436431603742,1.22490799214954,0.479227355091182,0.919218786610021,45.1475112097494,50.308811205564,49.0004841087417,5.40733779693795,3.84248103130121,5.73004707612436,32.1060448851588,12.9435400307286,19.0997809721013,20.0347438122094,19.362548588678,7.08317894136142,0,0.151143120213571,0,0,0,0,0.649776417447669,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0.502666365318702,0,0,0,0.323533699894818,0,0,0,21.6657789788545,26.5997317653088,0,0,0,0,48.3823765277577,49.8675657072303,2.76439574648302,38.4151747624931,37.5901722275586,57.9728644321173,45.1030711328366,0.101839363850316,0.124406970610093,0,1.05220927943237,1.04096354370163,0,0.540186389416048,0.452114453507145,0.95251098811859,0.640568601424249,0.843315521037559,2.06962696591213,0.215567992932842,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,13.8791366052324,1.3377599609307,0,0.528901133327089,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.350679099451593,0.252946148497029,0,0.156998727841375,0,0,0.667380422864376,0.982794975566015,1.12431056192427,2.23146133527353,2.41177159752417,2.03700681425136,2.5892652370573,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,38.0504898271067,35.5151410374376,0,0,0,0,0,0,0,0,0,0,0.395287777946524,20.5645642509957,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,40.6081411403016,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0,0,0,37.2736216127264,34.9847179745454,30.9363577257274,29.0431878160832,32.8839609489908,52.1221789198893,32.4010800111267,34.674732648265,42.142244035531,50.7405105516784,0.103787347584177,0.798049746802062,0.512200817262403,1.45864030240976,1.25767897576789,2.20612210140017,0.44449345560323,2.06035057238894,1.60459604795908,1.01078884705519,1.52087579934144,1.88626341386076,1.40462261204824,1.6646539625266,1.49332219284595,1.90517476513229,0.811190281613988,1.54327376370964,2.88460130562315,1.32479028120958,1.37147700954166,0.887379030796687,1.1921809497366,0.436039249896986,1.31753132581463,0.930760686808441,0.365855945745545,0.526139422875686,0.950628796921032,0.561142271657738,0.949080144993393,0.689531376628944,1.63692417267876,0.929621047115796,1.54325288784913,2.24829520144151,0.935726433781634,0.429742108096597,1.14772999241306,0.441182838239031,1.15933917810211|short_description=p2@Cit}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12704 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000128702_5end | |||
|cluster_id=chr5:116357457..116357517,+ | |||
|description=CAGE_peak_2_at_Cit_5end | |||
|id=chr5:116357457..116357517,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.45e-11!23;CL:0000337!2.45e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.63e-15,23;CL:0000337,9.63e-15,23;CL:0000540,1.12e-08,33;CL:0000047,1.12e-08,33;CL:0000031,1.12e-08,33;CL:0000404,1.12e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.10e-21!52;UBERON:0005068!1.10e-21!52;UBERON:0006241!1.10e-21!52;UBERON:0007135!1.10e-21!52;UBERON:0000033!2.06e-21!63;UBERON:0002346!4.07e-21!71;UBERON:0003075!4.07e-21!71;UBERON:0007284!4.07e-21!71;UBERON:0001017!4.79e-21!73;UBERON:0005743!4.79e-21!73;UBERON:0000955!1.13e-20!50;UBERON:0006238!1.13e-20!50;UBERON:0000073!2.63e-20!75;UBERON:0001016!2.63e-20!75;UBERON:0002616!5.34e-20!49;UBERON:0004121!4.59e-18!102;UBERON:0000924!4.59e-18!102;UBERON:0006601!4.59e-18!102;UBERON:0002020!5.02e-18!34;UBERON:0003056!3.17e-17!49;UBERON:0003080!1.74e-15!40;UBERON:0002791!8.19e-15!29;UBERON:0003528!8.19e-15!29;UBERON:0001893!8.19e-15!29;UBERON:0002780!9.64e-15!39;UBERON:0001890!9.64e-15!39;UBERON:0006240!9.64e-15!39;UBERON:0002619!2.15e-10!17;UBERON:0007811!3.08e-10!86;UBERON:0000956!5.90e-10!21;UBERON:0001869!5.90e-10!21;UBERON:0000203!5.90e-10!21;UBERON:0000025!1.16e-09!114;UBERON:0004111!2.79e-09!122;UBERON:0000153!7.89e-09!94;UBERON:0002021!1.35e-08!10;UBERON:0000411!1.35e-08!10;UBERON:0001950!1.35e-08!10;UBERON:0003076!5.92e-07!12;UBERON:0003057!5.92e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.62e-27,54;UBERON:0001049,6.22e-25,52;UBERON:0005068,6.22e-25,52;UBERON:0006241,6.22e-25,52;UBERON:0007135,6.22e-25,52;UBERON:0001017,4.55e-24,73;UBERON:0002020,2.82e-23,34;UBERON:0001016,4.53e-23,75;UBERON:0002346,1.24e-21,64;UBERON:0003075,1.24e-21,64;UBERON:0007284,1.24e-21,64;UBERON:0000955,1.05e-19,47;UBERON:0006238,1.05e-19,47;UBERON:0002616,1.04e-18,46;UBERON:0004121,3.17e-18,95;UBERON:0000924,3.17e-18,95;UBERON:0006601,3.17e-18,95;UBERON:0003528,5.85e-18,29;UBERON:0002791,5.85e-18,29;UBERON:0001893,5.85e-18,29;UBERON:0010371,1.67e-17,73;UBERON:0003080,8.24e-16,40;UBERON:0002780,1.03e-14,39;UBERON:0001890,1.03e-14,39;UBERON:0006240,1.03e-14,39;UBERON:0003056,1.44e-14,49;UBERON:0002021,6.22e-14,10;UBERON:0000411,6.22e-14,10;UBERON:0001950,6.22e-14,10;UBERON:0010314,1.54e-11,92;UBERON:0002619,2.22e-11,17;UBERON:0003076,3.42e-10,12;UBERON:0003057,3.42e-10,12;UBERON:0000956,3.65e-10,21;UBERON:0001869,3.65e-10,21;UBERON:0000203,3.65e-10,21;UBERON:0002420,8.46e-10,8;UBERON:0007245,8.46e-10,8;UBERON:0010009,8.46e-10,8;UBERON:0010011,8.46e-10,8;UBERON:0000454,8.46e-10,8;UBERON:0000025,1.18e-08,114;UBERON:0002240,4.33e-08,6;UBERON:0005174,4.33e-08,6;UBERON:0001137,4.33e-08,6;UBERON:0004111,2.21e-07,122;UBERON:0001948,8.26e-07,5;UBERON:0002315,8.26e-07,5 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.58328969722285,0.839918529752175,0,0,0,0,0,0,0,2.83243045203437,5.81890077199236,5.07065122804943,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0.405017814995072,0.210324961351382,24.8516356431309,19.436431603742,1.22490799214954,0.479227355091182,0.919218786610021,45.1475112097494,50.308811205564,49.0004841087417,5.40733779693795,3.84248103130121,5.73004707612436,32.1060448851588,12.9435400307286,19.0997809721013,20.0347438122094,19.362548588678,7.08317894136142,0,0.151143120213571,0,0,0,0,0.649776417447669,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0.502666365318702,0,0,0,0.323533699894818,0,0,0,21.6657789788545,26.5997317653088,0,0,0,0,48.3823765277577,49.8675657072303,2.76439574648302,38.4151747624931,37.5901722275586,57.9728644321173,45.1030711328366,0.101839363850316,0.124406970610093,0,1.05220927943237,1.04096354370163,0,0.540186389416048,0.452114453507145,0.95251098811859,0.640568601424249,0.843315521037559,2.06962696591213,0.215567992932842,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,13.8791366052324,1.3377599609307,0,0.528901133327089,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.350679099451593,0.252946148497029,0,0.156998727841375,0,0,0.667380422864376,0.982794975566015,1.12431056192427,2.23146133527353,2.41177159752417,2.03700681425136,2.5892652370573,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,38.0504898271067,35.5151410374376,0,0,0,0,0,0,0,0,0,0,0.395287777946524,20.5645642509957,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,40.6081411403016,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0,0,0,37.2736216127264,34.9847179745454,30.9363577257274,29.0431878160832,32.8839609489908,52.1221789198893,32.4010800111267,34.674732648265,42.142244035531,50.7405105516784,0.103787347584177,0.798049746802062,0.512200817262403,1.45864030240976,1.25767897576789,2.20612210140017,0.44449345560323,2.06035057238894,1.60459604795908,1.01078884705519,1.52087579934144,1.88626341386076,1.40462261204824,1.6646539625266,1.49332219284595,1.90517476513229,0.811190281613988,1.54327376370964,2.88460130562315,1.32479028120958,1.37147700954166,0.887379030796687,1.1921809497366,0.436039249896986,1.31753132581463,0.930760686808441,0.365855945745545,0.526139422875686,0.950628796921032,0.561142271657738,0.949080144993393,0.689531376628944,1.63692417267876,0.929621047115796,1.54325288784913,2.24829520144151,0.935726433781634,0.429742108096597,1.14772999241306,0.441182838239031,1.15933917810211 | |||
|short_description=p2@Cit | |||
}} |
Latest revision as of 17:49, 1 October 2015
Short description: | p2@Cit |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cit_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000128702_5end |
EntrezGene: | Cit |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.63e-15 | 23 |
neuroblast (sensu Vertebrata) | 9.63e-15 | 23 |
neuron | 1.12e-08 | 33 |
neuronal stem cell | 1.12e-08 | 33 |
neuroblast | 1.12e-08 | 33 |
electrically signaling cell | 1.12e-08 | 33 |