FFCP PHASE1:Mm9::chr6:114081223..114081240,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=243616|HGNC=|MCL_coexpression_id=287|UniProt=P31650|association_with_transcript=0bp_to_ENSMUST00000032451,NM_172890,uc009dhs.1_5end|description=CAGE_peak_1_at_Slc6a11_5end|id=chr6:114081223..114081240,+|ontology_enrichment_celltype=CL:0000117!1.96e-13!23;CL:0000337!1.96e-13!23;CL:0000221!7.54e-08!44;CL:0000133!7.54e-08!44;CL:0002319!1.22e-07!43;CL:0000540!1.28e-07!33;CL:0000047!1.28e-07!33;CL:0000031!1.28e-07!33;CL:0000404!1.28e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.50e-16,23;CL:0000337,2.50e-16,23;CL:0000540,9.80e-10,33;CL:0000047,9.80e-10,33;CL:0000031,9.80e-10,33;CL:0000404,9.80e-10,33;CL:0000221,2.20e-08,44;CL:0000133,2.20e-08,44;CL:0002319,3.95e-08,43;CL:0000393,4.72e-07,39;CL:0000211,4.72e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.36e-28!63;UBERON:0001049!2.33e-26!52;UBERON:0005068!2.33e-26!52;UBERON:0006241!2.33e-26!52;UBERON:0007135!2.33e-26!52;UBERON:0001017!5.21e-26!73;UBERON:0005743!5.21e-26!73;UBERON:0000073!8.87e-26!75;UBERON:0001016!8.87e-26!75;UBERON:0002346!9.81e-26!71;UBERON:0003075!9.81e-26!71;UBERON:0007284!9.81e-26!71;UBERON:0004121!2.50e-25!102;UBERON:0000924!2.50e-25!102;UBERON:0006601!2.50e-25!102;UBERON:0000955!1.10e-24!50;UBERON:0006238!1.10e-24!50;UBERON:0002616!7.09e-24!49;UBERON:0003056!2.37e-23!49;UBERON:0003080!1.31e-19!40;UBERON:0002780!8.99e-19!39;UBERON:0001890!8.99e-19!39;UBERON:0006240!8.99e-19!39;UBERON:0002020!3.14e-18!34;UBERON:0007811!4.29e-15!86;UBERON:0002791!2.63e-14!29;UBERON:0003528!2.63e-14!29;UBERON:0001893!2.63e-14!29;UBERON:0000153!1.01e-12!94;UBERON:0000956!2.02e-09!21;UBERON:0001869!2.02e-09!21;UBERON:0000203!2.02e-09!21;UBERON:0002619!2.57e-08!17;UBERON:0002021!1.43e-07!10;UBERON:0000411!1.43e-07!10;UBERON:0001950!1.43e-07!10;UBERON:0003076!2.91e-07!12;UBERON:0003057!2.91e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.15e-33,64;UBERON:0003075,3.15e-33,64;UBERON:0007284,3.15e-33,64;UBERON:0000073,4.27e-33,54;UBERON:0001017,1.47e-31,73;UBERON:0001049,6.38e-31,52;UBERON:0005068,6.38e-31,52;UBERON:0006241,6.38e-31,52;UBERON:0007135,6.38e-31,52;UBERON:0001016,4.14e-30,75;UBERON:0004121,2.25e-29,95;UBERON:0000924,2.25e-29,95;UBERON:0006601,2.25e-29,95;UBERON:0010371,1.35e-28,73;UBERON:0003056,6.01e-28,49;UBERON:0000955,8.11e-26,47;UBERON:0006238,8.11e-26,47;UBERON:0002616,7.56e-25,46;UBERON:0003080,2.73e-23,40;UBERON:0002780,2.95e-22,39;UBERON:0001890,2.95e-22,39;UBERON:0006240,2.95e-22,39;UBERON:0002020,1.52e-21,34;UBERON:0010314,2.61e-18,92;UBERON:0003528,1.04e-16,29;UBERON:0002791,1.04e-16,29;UBERON:0001893,1.04e-16,29;UBERON:0000956,1.08e-10,21;UBERON:0001869,1.08e-10,21;UBERON:0000203,1.08e-10,21;UBERON:0002619,2.63e-09,17;UBERON:0002021,4.85e-09,10;UBERON:0000411,4.85e-09,10;UBERON:0001950,4.85e-09,10;UBERON:0003076,5.96e-08,12;UBERON:0003057,5.96e-08,12;UBERON:0002420,1.74e-07,8;UBERON:0007245,1.74e-07,8;UBERON:0010009,1.74e-07,8;UBERON:0010011,1.74e-07,8;UBERON:0000454,1.74e-07,8;UBERON:0002240,3.41e-07,6;UBERON:0005174,3.41e-07,6;UBERON:0001137,3.41e-07,6|phase1_expression=7.8472935081349,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,28.6595887809105,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,1.1198913730029,5.75010257459886,0,0,0,0,0,0,20.8385954685386,24.3335850465135,15.2119536841483,0,0,0,0.988866362566974,0,4.19440154725767,9.60545763303886,3.21437798156281,3.78016627328734,2.94454945891935,654.426405269114,477.73865407834,6.85948475603743,7.57179221044067,4.5960939330501,279.694337738447,393.532375978549,364.969123016834,14.7712642257817,21.0421580285542,9.37644067002168,374.663584659853,364.107408690497,349.602390913342,347.072473687981,370.735856800864,103.638091878867,0.075726193333184,0.151143120213571,0.289864488701678,0,0,1.61910957491345,0,0,7.3031098468511,0,0,0,3.66192891419369,0,0,0,0,0,0,4.79572294820052,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0,0,0.485300549842228,0,0,0,24.59358694897,26.1808383516819,0,0,0,0,504.644664154848,140.452685065318,50.1360864930329,63.7935255105655,61.6274252166097,356.356496419646,216.916568721592,0,0,0,12.2056276414155,1.30120442962704,2.06911893990126,3.42118046630164,8.74087943447147,18.5739642683125,22.0355598889942,26.2364828767241,50.7058606648471,0,0,0,0.219195732427575,0,0,0.823128545631774,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,64.7693041577512,36.531137394646,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.494096864172033,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,294.931433807574,266.53937531067,0,0,0,0,0,0.238968797952552,0,0,0,0,0,321.963959054651,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,32.6822021523636,3.96134406868882,3.23396709456886,3.21505552547388,14.0098784577396,8.91844088010353,14.6448628335888,18.5723618959906,0,0,0,0,0.161464426695906,0.241251699712623,0,0.164140899745061,0,261.264250532808,0,0,0,0,0,0,0,0,0,2.86401185404534,0,1.01659733563424,1.08005340821801,1.04544148007234,0.655087691238533,0.674321731924103,0.826534557253359,1.57053565190418,0.90730481304255,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,1.05621514781179,0.5208175393758,0.314578033277133,0.241584120826006,0,0,0,0.410843828659309,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0,0,0,0,0,54.7809287338555,35.4450432110526,38.3839994004396,33.3395173746754,47.2706938641743,43.8128460486026,39.8263275136765,31.5224842256954,35.7982503097522,46.080667745912,0.31136204275253,1.99512436700516,1.53660245178721,6.32077464377565,3.98265008993166,7.35374033800057,12.2235700290888,10.7138229764225,13.7995260124481,11.1186773176071,10.8996098952803,14.1469756039557,10.3005658216871,12.22880410933,10.3383844120104,10.9547548995107,11.4725482685407,10.4170979050401,14.835092428919,10.745521169811,6.51451579532289,7.45398385869217,8.10683045820891,9.88355633099834,12.7047663560696,10.5768259864596,13.7195979654579,11.8381370147029,10.5927208799772,11.2228454331548,10.6771516311757,12.8055827088233,15.1415485972785,13.634442024365,8.48789088317022,24.4814366379187,10.5269223800434,11.6030369186081,13.1988949127502,13.4560765662904,9.27471342481686|short_description=p1@Slc6a11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243616 | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt=P31650 | |||
|association_with_transcript=0bp_to_ENSMUST00000032451,NM_172890,uc009dhs.1_5end | |||
|cluster_id=chr6:114081223..114081240,+ | |||
|description=CAGE_peak_1_at_Slc6a11_5end | |||
|id=chr6:114081223..114081240,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.96e-13!23;CL:0000337!1.96e-13!23;CL:0000221!7.54e-08!44;CL:0000133!7.54e-08!44;CL:0002319!1.22e-07!43;CL:0000540!1.28e-07!33;CL:0000047!1.28e-07!33;CL:0000031!1.28e-07!33;CL:0000404!1.28e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.50e-16,23;CL:0000337,2.50e-16,23;CL:0000540,9.80e-10,33;CL:0000047,9.80e-10,33;CL:0000031,9.80e-10,33;CL:0000404,9.80e-10,33;CL:0000221,2.20e-08,44;CL:0000133,2.20e-08,44;CL:0002319,3.95e-08,43;CL:0000393,4.72e-07,39;CL:0000211,4.72e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.36e-28!63;UBERON:0001049!2.33e-26!52;UBERON:0005068!2.33e-26!52;UBERON:0006241!2.33e-26!52;UBERON:0007135!2.33e-26!52;UBERON:0001017!5.21e-26!73;UBERON:0005743!5.21e-26!73;UBERON:0000073!8.87e-26!75;UBERON:0001016!8.87e-26!75;UBERON:0002346!9.81e-26!71;UBERON:0003075!9.81e-26!71;UBERON:0007284!9.81e-26!71;UBERON:0004121!2.50e-25!102;UBERON:0000924!2.50e-25!102;UBERON:0006601!2.50e-25!102;UBERON:0000955!1.10e-24!50;UBERON:0006238!1.10e-24!50;UBERON:0002616!7.09e-24!49;UBERON:0003056!2.37e-23!49;UBERON:0003080!1.31e-19!40;UBERON:0002780!8.99e-19!39;UBERON:0001890!8.99e-19!39;UBERON:0006240!8.99e-19!39;UBERON:0002020!3.14e-18!34;UBERON:0007811!4.29e-15!86;UBERON:0002791!2.63e-14!29;UBERON:0003528!2.63e-14!29;UBERON:0001893!2.63e-14!29;UBERON:0000153!1.01e-12!94;UBERON:0000956!2.02e-09!21;UBERON:0001869!2.02e-09!21;UBERON:0000203!2.02e-09!21;UBERON:0002619!2.57e-08!17;UBERON:0002021!1.43e-07!10;UBERON:0000411!1.43e-07!10;UBERON:0001950!1.43e-07!10;UBERON:0003076!2.91e-07!12;UBERON:0003057!2.91e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.15e-33,64;UBERON:0003075,3.15e-33,64;UBERON:0007284,3.15e-33,64;UBERON:0000073,4.27e-33,54;UBERON:0001017,1.47e-31,73;UBERON:0001049,6.38e-31,52;UBERON:0005068,6.38e-31,52;UBERON:0006241,6.38e-31,52;UBERON:0007135,6.38e-31,52;UBERON:0001016,4.14e-30,75;UBERON:0004121,2.25e-29,95;UBERON:0000924,2.25e-29,95;UBERON:0006601,2.25e-29,95;UBERON:0010371,1.35e-28,73;UBERON:0003056,6.01e-28,49;UBERON:0000955,8.11e-26,47;UBERON:0006238,8.11e-26,47;UBERON:0002616,7.56e-25,46;UBERON:0003080,2.73e-23,40;UBERON:0002780,2.95e-22,39;UBERON:0001890,2.95e-22,39;UBERON:0006240,2.95e-22,39;UBERON:0002020,1.52e-21,34;UBERON:0010314,2.61e-18,92;UBERON:0003528,1.04e-16,29;UBERON:0002791,1.04e-16,29;UBERON:0001893,1.04e-16,29;UBERON:0000956,1.08e-10,21;UBERON:0001869,1.08e-10,21;UBERON:0000203,1.08e-10,21;UBERON:0002619,2.63e-09,17;UBERON:0002021,4.85e-09,10;UBERON:0000411,4.85e-09,10;UBERON:0001950,4.85e-09,10;UBERON:0003076,5.96e-08,12;UBERON:0003057,5.96e-08,12;UBERON:0002420,1.74e-07,8;UBERON:0007245,1.74e-07,8;UBERON:0010009,1.74e-07,8;UBERON:0010011,1.74e-07,8;UBERON:0000454,1.74e-07,8;UBERON:0002240,3.41e-07,6;UBERON:0005174,3.41e-07,6;UBERON:0001137,3.41e-07,6 | |||
|phase1_expression=7.8472935081349,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,28.6595887809105,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,1.1198913730029,5.75010257459886,0,0,0,0,0,0,20.8385954685386,24.3335850465135,15.2119536841483,0,0,0,0.988866362566974,0,4.19440154725767,9.60545763303886,3.21437798156281,3.78016627328734,2.94454945891935,654.426405269114,477.73865407834,6.85948475603743,7.57179221044067,4.5960939330501,279.694337738447,393.532375978549,364.969123016834,14.7712642257817,21.0421580285542,9.37644067002168,374.663584659853,364.107408690497,349.602390913342,347.072473687981,370.735856800864,103.638091878867,0.075726193333184,0.151143120213571,0.289864488701678,0,0,1.61910957491345,0,0,7.3031098468511,0,0,0,3.66192891419369,0,0,0,0,0,0,4.79572294820052,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0,0,0.485300549842228,0,0,0,24.59358694897,26.1808383516819,0,0,0,0,504.644664154848,140.452685065318,50.1360864930329,63.7935255105655,61.6274252166097,356.356496419646,216.916568721592,0,0,0,12.2056276414155,1.30120442962704,2.06911893990126,3.42118046630164,8.74087943447147,18.5739642683125,22.0355598889942,26.2364828767241,50.7058606648471,0,0,0,0.219195732427575,0,0,0.823128545631774,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,64.7693041577512,36.531137394646,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.494096864172033,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,294.931433807574,266.53937531067,0,0,0,0,0,0.238968797952552,0,0,0,0,0,321.963959054651,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,32.6822021523636,3.96134406868882,3.23396709456886,3.21505552547388,14.0098784577396,8.91844088010353,14.6448628335888,18.5723618959906,0,0,0,0,0.161464426695906,0.241251699712623,0,0.164140899745061,0,261.264250532808,0,0,0,0,0,0,0,0,0,2.86401185404534,0,1.01659733563424,1.08005340821801,1.04544148007234,0.655087691238533,0.674321731924103,0.826534557253359,1.57053565190418,0.90730481304255,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,1.05621514781179,0.5208175393758,0.314578033277133,0.241584120826006,0,0,0,0.410843828659309,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0,0,0,0,0,54.7809287338555,35.4450432110526,38.3839994004396,33.3395173746754,47.2706938641743,43.8128460486026,39.8263275136765,31.5224842256954,35.7982503097522,46.080667745912,0.31136204275253,1.99512436700516,1.53660245178721,6.32077464377565,3.98265008993166,7.35374033800057,12.2235700290888,10.7138229764225,13.7995260124481,11.1186773176071,10.8996098952803,14.1469756039557,10.3005658216871,12.22880410933,10.3383844120104,10.9547548995107,11.4725482685407,10.4170979050401,14.835092428919,10.745521169811,6.51451579532289,7.45398385869217,8.10683045820891,9.88355633099834,12.7047663560696,10.5768259864596,13.7195979654579,11.8381370147029,10.5927208799772,11.2228454331548,10.6771516311757,12.8055827088233,15.1415485972785,13.634442024365,8.48789088317022,24.4814366379187,10.5269223800434,11.6030369186081,13.1988949127502,13.4560765662904,9.27471342481686 | |||
|short_description=p1@Slc6a11 | |||
}} |
Latest revision as of 11:43, 26 September 2015
Short description: | p1@Slc6a11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc6a11_5end |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | 0bp_to_ENSMUST00000032451, NM_172890, uc009dhs.1_5end |
EntrezGene: | Slc6a11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.50e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.50e-16 | 23 |
neuron | 9.80e-10 | 33 |
neuronal stem cell | 9.80e-10 | 33 |
neuroblast | 9.80e-10 | 33 |
electrically signaling cell | 9.80e-10 | 33 |
ectodermal cell | 2.20e-08 | 44 |
neurectodermal cell | 2.20e-08 | 44 |
neural cell | 3.95e-08 | 43 |
electrically responsive cell | 4.72e-07 | 39 |
electrically active cell | 4.72e-07 | 39 |