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FFCP PHASE1:Mm9::chr11:93905645..93905656,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:93905645..93905656,+
|DHSsupport=NA
|short_description=p6@Spag9
|DPIdataset=NA
|description=CAGE_peak_6_at_Spag9_5end
|association_with_transcript=-22bp_to_ENSMUST00000024979_5end
|EntrezGene=70834
|EntrezGene=70834
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=F8WH31
|UniProt=F8WH31
|association_with_transcript=-22bp_to_ENSMUST00000024979_5end
|cluster_id=chr11:93905645..93905656,+
|description=CAGE_peak_6_at_Spag9_5end
|id=chr11:93905645..93905656,+
|ontology_enrichment_celltype=CL:0000540!2.19e-14!33;CL:0000047!2.19e-14!33;CL:0000031!2.19e-14!33;CL:0000404!2.19e-14!33;CL:0000221!3.34e-13!44;CL:0000133!3.34e-13!44;CL:0002319!1.04e-12!43;CL:0000117!7.03e-12!23;CL:0000337!7.03e-12!23;CL:0000393!6.58e-10!39;CL:0000211!6.58e-10!39;CL:0000055!1.05e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-19,23;CL:0000337,2.16e-19,23;CL:0000540,9.57e-15,33;CL:0000047,9.57e-15,33;CL:0000031,9.57e-15,33;CL:0000404,9.57e-15,33;CL:0000221,4.05e-13,44;CL:0000133,4.05e-13,44;CL:0002319,2.64e-12,43;CL:0000393,1.36e-11,39;CL:0000211,1.36e-11,39;CL:0002609,4.24e-10,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.55e-26!75;UBERON:0001016!5.55e-26!75;UBERON:0004121!6.11e-26!102;UBERON:0000924!6.11e-26!102;UBERON:0006601!6.11e-26!102;UBERON:0001017!2.43e-25!73;UBERON:0005743!2.43e-25!73;UBERON:0002346!1.50e-22!71;UBERON:0003075!1.50e-22!71;UBERON:0007284!1.50e-22!71;UBERON:0000033!2.84e-22!63;UBERON:0003056!3.03e-19!49;UBERON:0000955!7.02e-19!50;UBERON:0006238!7.02e-19!50;UBERON:0002616!8.14e-19!49;UBERON:0001049!2.22e-18!52;UBERON:0005068!2.22e-18!52;UBERON:0006241!2.22e-18!52;UBERON:0007135!2.22e-18!52;UBERON:0003080!8.58e-15!40;UBERON:0002020!1.12e-14!34;UBERON:0002791!3.25e-14!29;UBERON:0003528!3.25e-14!29;UBERON:0001893!3.25e-14!29;UBERON:0002780!4.27e-14!39;UBERON:0001890!4.27e-14!39;UBERON:0006240!4.27e-14!39;UBERON:0007811!1.30e-10!86;UBERON:0000956!9.21e-10!21;UBERON:0001869!9.21e-10!21;UBERON:0000203!9.21e-10!21;UBERON:0000153!1.20e-09!94;UBERON:0002619!2.80e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.33e-36,64;UBERON:0003075,6.33e-36,64;UBERON:0007284,6.33e-36,64;UBERON:0004121,4.79e-33,95;UBERON:0000924,4.79e-33,95;UBERON:0006601,4.79e-33,95;UBERON:0010371,1.23e-31,73;UBERON:0003056,5.87e-31,49;UBERON:0000073,6.67e-29,54;UBERON:0001016,8.70e-28,75;UBERON:0001017,2.27e-27,73;UBERON:0001049,1.16e-26,52;UBERON:0005068,1.16e-26,52;UBERON:0006241,1.16e-26,52;UBERON:0007135,1.16e-26,52;UBERON:0002616,3.29e-25,46;UBERON:0000955,1.77e-24,47;UBERON:0006238,1.77e-24,47;UBERON:0010314,6.72e-24,92;UBERON:0003528,2.21e-22,29;UBERON:0002791,2.21e-22,29;UBERON:0001893,2.21e-22,29;UBERON:0002020,7.97e-22,34;UBERON:0003080,1.84e-21,40;UBERON:0002780,3.86e-20,39;UBERON:0001890,3.86e-20,39;UBERON:0006240,3.86e-20,39;UBERON:0000956,1.62e-13,21;UBERON:0001869,1.62e-13,21;UBERON:0000203,1.62e-13,21;UBERON:0000970,1.25e-10,9;UBERON:0000019,1.25e-10,9;UBERON:0000047,1.25e-10,9;UBERON:0010312,1.25e-10,9;UBERON:0004088,1.25e-10,9;UBERON:0002104,1.25e-10,9;UBERON:0001456,1.25e-10,9;UBERON:0003072,1.25e-10,9;UBERON:0004128,1.25e-10,9;UBERON:0003071,1.25e-10,9;UBERON:0002420,1.71e-10,8;UBERON:0007245,1.71e-10,8;UBERON:0010009,1.71e-10,8;UBERON:0010011,1.71e-10,8;UBERON:0000454,1.71e-10,8;UBERON:0000020,2.45e-09,12;UBERON:0001032,2.45e-09,12;UBERON:0004456,2.45e-09,12;UBERON:0002619,7.63e-09,17;UBERON:0000033,1.84e-08,13;UBERON:0005085,1.84e-08,13;UBERON:0001444,2.24e-08,11;UBERON:0000025,9.46e-08,114;UBERON:0004111,2.83e-07,122;UBERON:0000483,4.68e-07,174;UBERON:0000369,6.29e-07,5;UBERON:0002435,6.29e-07,5;UBERON:0000204,6.29e-07,5;UBERON:0010082,6.29e-07,5;UBERON:0000119,7.52e-07,176
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,2.42779753031517,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0,0,0.384218305321555,4.14758449233911,2.43010688997043,2.3135745748652,0,0.662605622854841,4.5321595709533,3.1629005436018,3.67687514644008,1.10115880999389,2.80912143787413,4.45458946443106,1.97829431595291,1.09785172322892,1.04182674111352,1.3959149950069,3.37657566019008,2.13917546887534,0.294628585473668,2.42031857358475,1.3047961207771,0.302904773332736,1.28471652181535,0,0,0,0,0,0,0.280888840263504,0,0,0,1.40843419776681,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0.647067399789637,0.220841518460394,0,0,1.46390398505774,3.77004072264219,0,0,0,0,3.74476598512057,3.20250421973039,2.26177833803156,2.78118912307642,1.79000820131231,2.90903262383384,3.0825839982874,0.101839363850316,0.124406970610093,0,0,1.43132487258974,2.06911893990126,3.96136685571768,3.16480117455002,4.35433594568498,4.61209393025459,3.65436725782942,1.29351685369508,0,0.378212160335639,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.828503090142008,0.469052119962192,1.44049649168812,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0,0,0,1.68231958851302,2.57261530948211,0,0,0,0.232236671860439,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0.407302655690628,0,0.420814919341911,0.505892296994058,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0.502518772325447,0.476087281772027,0,0.315270288212382,0.44292937929755,0.159454768657487,0,0,0,0,0,0,0,5.9403718295483,3.8679856575427,0,1.00988370881749,0.631016438832513,0.780877488593277,1.07711698866399,0.477937595905104,0.891194696329576,0.566153061577665,0.404810701674894,0.584511715822624,1.58115111178609,0.321321316421807,0,0.178065603667255,0.488660878060728,0,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,1.62054984628179,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0,0.322928853391811,0.0603129249281559,0.238744688006273,0.164140899745061,0,4.45020724825223,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0.388902376688095,0.258319646955462,0.337912250981556,0,0.39061315453185,0.734015410979976,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,2.25900737046827,0.920650473014354,1.71868654031819,1.3748254587495,3.42541259885321,0.755393897389701,1.35004500046361,1.80128481289688,0.906284817968409,0.51776031175182,2.38710899443606,2.79317411380722,1.70733605754134,0.729320151204882,0.209613162627982,0.735374033800057,0.666740183404846,0.206035057238894,0.64183841918363,1.01078884705519,0.50695859978048,0.188626341386076,0.655490552289177,0.448176066834085,0.516919220600519,0.476293691283074,0.579421629724277,0.38581844092741,1.23625770240992,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,1.16277133305863,0.658765662907314,0.25384382367503,0.548783918618318,1.05227884575137,0.271608227691724,0,0.711810108745045,0.985044823755635,0.818462086339379,0.619747364743864,0.771626443924566,1.24905288968973,0.233931608445408,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,2.42779753031517,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0,0,0.384218305321555,4.14758449233911,2.43010688997043,2.3135745748652,0,0.662605622854841,4.5321595709533,3.1629005436018,3.67687514644008,1.10115880999389,2.80912143787413,4.45458946443106,1.97829431595291,1.09785172322892,1.04182674111352,1.3959149950069,3.37657566019008,2.13917546887534,0.294628585473668,2.42031857358475,1.3047961207771,0.302904773332736,1.28471652181535,0,0,0,0,0,0,0.280888840263504,0,0,0,1.40843419776681,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0.647067399789637,0.220841518460394,0,0,1.46390398505774,3.77004072264219,0,0,0,0,3.74476598512057,3.20250421973039,2.26177833803156,2.78118912307642,1.79000820131231,2.90903262383384,3.0825839982874,0.101839363850316,0.124406970610093,0,0,1.43132487258974,2.06911893990126,3.96136685571768,3.16480117455002,4.35433594568498,4.61209393025459,3.65436725782942,1.29351685369508,0,0.378212160335639,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.828503090142008,0.469052119962192,1.44049649168812,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0,0,0,1.68231958851302,2.57261530948211,0,0,0,0.232236671860439,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0.407302655690628,0,0.420814919341911,0.505892296994058,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0.502518772325447,0.476087281772027,0,0.315270288212382,0.44292937929755,0.159454768657487,0,0,0,0,0,0,0,5.9403718295483,3.8679856575427,0,1.00988370881749,0.631016438832513,0.780877488593277,1.07711698866399,0.477937595905104,0.891194696329576,0.566153061577665,0.404810701674894,0.584511715822624,1.58115111178609,0.321321316421807,0,0.178065603667255,0.488660878060728,0,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,1.62054984628179,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0,0.322928853391811,0.0603129249281559,0.238744688006273,0.164140899745061,0,4.45020724825223,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0.388902376688095,0.258319646955462,0.337912250981556,0,0.39061315453185,0.734015410979976,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,2.25900737046827,0.920650473014354,1.71868654031819,1.3748254587495,3.42541259885321,0.755393897389701,1.35004500046361,1.80128481289688,0.906284817968409,0.51776031175182,2.38710899443606,2.79317411380722,1.70733605754134,0.729320151204882,0.209613162627982,0.735374033800057,0.666740183404846,0.206035057238894,0.64183841918363,1.01078884705519,0.50695859978048,0.188626341386076,0.655490552289177,0.448176066834085,0.516919220600519,0.476293691283074,0.579421629724277,0.38581844092741,1.23625770240992,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,1.16277133305863,0.658765662907314,0.25384382367503,0.548783918618318,1.05227884575137,0.271608227691724,0,0.711810108745045,0.985044823755635,0.818462086339379,0.619747364743864,0.771626443924566,1.24905288968973,0.233931608445408,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p6@Spag9
}}
}}

Latest revision as of 23:33, 25 September 2015

Short description:p6@Spag9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Spag9_5end
Coexpression cluster:NA
Association with transcript: -22bp_to_ENSMUST00000024979_5end
EntrezGene:Spag9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Spag9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C64.35
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm6.33e-3664
neural plate6.33e-3664
presumptive neural plate6.33e-3664
ectoderm-derived structure4.79e-3395
ectoderm4.79e-3395
presumptive ectoderm4.79e-3395
ecto-epithelium1.23e-3173
pre-chordal neural plate5.87e-3149
regional part of nervous system6.67e-2954
nervous system8.70e-2875
central nervous system2.27e-2773
neural tube1.16e-2652
neural rod1.16e-2652
future spinal cord1.16e-2652
neural keel1.16e-2652
regional part of brain3.29e-2546
brain1.77e-2447
future brain1.77e-2447
structure with developmental contribution from neural crest6.72e-2492
brain grey matter2.21e-2229
regional part of telencephalon2.21e-2229
telencephalon2.21e-2229
gray matter7.97e-2234
anterior neural tube1.84e-2140
regional part of forebrain3.86e-2039
forebrain3.86e-2039
future forebrain3.86e-2039
cerebral cortex1.62e-1321
cerebral hemisphere1.62e-1321
pallium1.62e-1321
eye1.25e-109
camera-type eye1.25e-109
simple eye1.25e-109
immature eye1.25e-109
ocular region1.25e-109
visual system1.25e-109
face1.25e-109
optic cup1.25e-109
optic vesicle1.25e-109
eye primordium1.25e-109
basal ganglion1.71e-108
nuclear complex of neuraxis1.71e-108
aggregate regional part of brain1.71e-108
collection of basal ganglia1.71e-108
cerebral subcortex1.71e-108
sense organ2.45e-0912
sensory system2.45e-0912
entire sense organ system2.45e-0912
regional part of cerebral cortex7.63e-0917
head1.84e-0813
ectodermal placode1.84e-0813
subdivision of head2.24e-0811
tube9.46e-08114
anatomical conduit2.83e-07122
epithelium4.68e-07174
corpus striatum6.29e-075
striatum6.29e-075
ventral part of telencephalon6.29e-075
future corpus striatum6.29e-075
cell layer7.52e-07176
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