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FFCP PHASE1:Mm9::chr12:4038868..4038879,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:4038868..4038879,-
|DHSsupport=NA
|short_description=p3@Efr3b
|DPIdataset=NA
|description=CAGE_peak_3_at_Efr3b_5end
|association_with_transcript=35bp_to_ENSMUST00000077156,ENSMUST00000111178,NM_001082483,uc007mxh.1_5end
|EntrezGene=668212
|EntrezGene=668212
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q6ZQ18
|UniProt=Q6ZQ18
|association_with_transcript=35bp_to_ENSMUST00000077156,ENSMUST00000111178,NM_001082483,uc007mxh.1_5end
|cluster_id=chr12:4038868..4038879,-
|description=CAGE_peak_3_at_Efr3b_5end
|id=chr12:4038868..4038879,-
|ontology_enrichment_celltype=CL:0000117!8.79e-15!23;CL:0000337!8.79e-15!23;CL:0000540!2.34e-12!33;CL:0000047!2.34e-12!33;CL:0000031!2.34e-12!33;CL:0000404!2.34e-12!33;CL:0002319!3.78e-09!43;CL:0000221!1.28e-08!44;CL:0000133!1.28e-08!44;CL:0000393!2.36e-08!39;CL:0000211!2.36e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-28,23;CL:0000337,1.89e-28,23;CL:0000540,3.22e-18,33;CL:0000047,3.22e-18,33;CL:0000031,3.22e-18,33;CL:0000404,3.22e-18,33;CL:0000393,1.29e-14,39;CL:0000211,1.29e-14,39;CL:0002319,8.78e-13,43;CL:0000221,2.23e-12,44;CL:0000133,2.23e-12,44;CL:0002609,1.07e-07,6;CL:0002321,1.25e-07,70;CL:0000120,5.12e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.77e-21!75;UBERON:0001016!2.77e-21!75;UBERON:0001017!3.09e-21!73;UBERON:0005743!3.09e-21!73;UBERON:0001049!9.02e-21!52;UBERON:0005068!9.02e-21!52;UBERON:0006241!9.02e-21!52;UBERON:0007135!9.02e-21!52;UBERON:0002020!1.69e-20!34;UBERON:0000955!6.74e-20!50;UBERON:0006238!6.74e-20!50;UBERON:0002346!6.85e-20!71;UBERON:0003075!6.85e-20!71;UBERON:0007284!6.85e-20!71;UBERON:0000033!2.11e-19!63;UBERON:0002616!3.00e-19!49;UBERON:0002791!5.93e-18!29;UBERON:0003528!5.93e-18!29;UBERON:0001893!5.93e-18!29;UBERON:0003056!2.03e-17!49;UBERON:0004121!5.14e-17!102;UBERON:0000924!5.14e-17!102;UBERON:0006601!5.14e-17!102;UBERON:0003080!1.63e-15!40;UBERON:0002780!7.62e-15!39;UBERON:0001890!7.62e-15!39;UBERON:0006240!7.62e-15!39;UBERON:0000956!5.87e-13!21;UBERON:0001869!5.87e-13!21;UBERON:0000203!5.87e-13!21;UBERON:0002619!2.08e-10!17;UBERON:0007811!1.41e-08!86;UBERON:0000153!1.72e-08!94;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10;UBERON:0000025!1.51e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.64e-43,54;UBERON:0001017,7.70e-41,73;UBERON:0001049,1.25e-40,52;UBERON:0005068,1.25e-40,52;UBERON:0006241,1.25e-40,52;UBERON:0007135,1.25e-40,52;UBERON:0001016,1.73e-39,75;UBERON:0002020,7.86e-38,34;UBERON:0000955,1.64e-37,47;UBERON:0006238,1.64e-37,47;UBERON:0002616,6.33e-36,46;UBERON:0003528,9.75e-36,29;UBERON:0002791,9.75e-36,29;UBERON:0001893,9.75e-36,29;UBERON:0002346,2.53e-31,64;UBERON:0003075,2.53e-31,64;UBERON:0007284,2.53e-31,64;UBERON:0003080,5.47e-31,40;UBERON:0002780,2.48e-29,39;UBERON:0001890,2.48e-29,39;UBERON:0006240,2.48e-29,39;UBERON:0004121,4.32e-29,95;UBERON:0000924,4.32e-29,95;UBERON:0006601,4.32e-29,95;UBERON:0010371,2.37e-26,73;UBERON:0003056,6.10e-24,49;UBERON:0000956,4.68e-23,21;UBERON:0001869,4.68e-23,21;UBERON:0000203,4.68e-23,21;UBERON:0010314,4.67e-19,92;UBERON:0002619,9.45e-17,17;UBERON:0000025,1.22e-14,114;UBERON:0002021,1.57e-14,10;UBERON:0000411,1.57e-14,10;UBERON:0001950,1.57e-14,10;UBERON:0002420,9.51e-14,8;UBERON:0007245,9.51e-14,8;UBERON:0010009,9.51e-14,8;UBERON:0010011,9.51e-14,8;UBERON:0000454,9.51e-14,8;UBERON:0004111,4.33e-13,122;UBERON:0011216,1.85e-11,194;UBERON:0000369,1.36e-09,5;UBERON:0002435,1.36e-09,5;UBERON:0000204,1.36e-09,5;UBERON:0010082,1.36e-09,5;UBERON:0003076,1.48e-09,12;UBERON:0003057,1.48e-09,12;UBERON:0000483,7.80e-08,174;UBERON:0000119,1.22e-07,176;UBERON:0002950,1.86e-07,4;UBERON:0001891,1.86e-07,4;UBERON:0009616,1.86e-07,4;UBERON:0010286,1.86e-07,4
|phase1_expression=0.160148847104794,1.04692622291808,2.27499619694768,0.60492842261366,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,3.64169629547276,4.23192783417626,1.90149421051854,0,0,0,0,0,0,0,1.8664130215526,2.8351247049655,1.47227472945967,1.42825492201902,0.441737081903227,2.32732518508413,1.82106394934649,0.919218786610021,4.40463523997555,1.65993539510744,1.0752457327937,2.37395317914349,2.56165402086747,2.08365348222704,1.95428099300967,1.12552522006336,1.68078072554491,1.47314292736834,0.854230084794618,3.16879057903011,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.485300549842228,0,0,0,2.63502717310392,1.8850203613211,0.255457055208591,0,0,0,2.54644086988199,1.37250180845588,2.51308704225729,2.78118912307642,2.30143911597297,1.45451631191692,1.78465389374533,0.101839363850316,0,0.252722758433675,0.841767423545896,0.260240885925407,0.229902104433473,0.720248519221397,0.30140963567143,0.408218994907967,0.896796041993948,0.468508622798644,0.258703370739016,0.215567992932842,0.756424320671277,0,0.219195732427575,0.556094498451196,0,0.411564272815887,0,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,0.308534225774757,0.232533944750408,0,0.700592054203017,0.16455984991348,0,0.324275238183423,0,0.658650345873152,0.268412837520744,1.89260953707715,2.88132914661996,0.330418782983798,0.793351699990633,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0,0,0.342745537829186,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0.651859905768103,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,1.11618338060241,0.163863314715738,0.518054945597687,0,0,0,0,0.275936746304732,3.05046120976805,3.39913891117389,0,0.504941854408746,0.94652465824877,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,1.92792789853084,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0.582961673259701,3.70850604021019,0,0.619160603889667,0,0,0,0,0,0,0,0,0,0.609958401380546,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0.39061315453185,0.209718688851422,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0,1.6942555278512,0.920650473014354,2.29158205375759,2.06223818812425,1.37016503954128,3.0215755895588,1.35004500046361,4.5032120322422,4.53142408984205,2.5888015587591,0.62272408550506,1.19707462020309,0.512200817262403,0,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,1.28367683836726,0.252697211763798,0.50695859978048,0.188626341386076,0.655490552289177,0.576226371643824,0.17230640686684,0,0.695305955669133,0.192909220463705,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,0.476872379894642,0.290692833264657,0.470546902076653,0.507687647350059,0.73171189149109,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.492522411877817,0,0.464810523557898,0.771626443924566,0.749431733813838,0,0,0.191288332068843,0.441182838239031,0
|phase1_expression=0.160148847104794,1.04692622291808,2.27499619694768,0.60492842261366,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,3.64169629547276,4.23192783417626,1.90149421051854,0,0,0,0,0,0,0,1.8664130215526,2.8351247049655,1.47227472945967,1.42825492201902,0.441737081903227,2.32732518508413,1.82106394934649,0.919218786610021,4.40463523997555,1.65993539510744,1.0752457327937,2.37395317914349,2.56165402086747,2.08365348222704,1.95428099300967,1.12552522006336,1.68078072554491,1.47314292736834,0.854230084794618,3.16879057903011,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.485300549842228,0,0,0,2.63502717310392,1.8850203613211,0.255457055208591,0,0,0,2.54644086988199,1.37250180845588,2.51308704225729,2.78118912307642,2.30143911597297,1.45451631191692,1.78465389374533,0.101839363850316,0,0.252722758433675,0.841767423545896,0.260240885925407,0.229902104433473,0.720248519221397,0.30140963567143,0.408218994907967,0.896796041993948,0.468508622798644,0.258703370739016,0.215567992932842,0.756424320671277,0,0.219195732427575,0.556094498451196,0,0.411564272815887,0,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,0.308534225774757,0.232533944750408,0,0.700592054203017,0.16455984991348,0,0.324275238183423,0,0.658650345873152,0.268412837520744,1.89260953707715,2.88132914661996,0.330418782983798,0.793351699990633,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0,0,0.342745537829186,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0.651859905768103,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,1.11618338060241,0.163863314715738,0.518054945597687,0,0,0,0,0.275936746304732,3.05046120976805,3.39913891117389,0,0.504941854408746,0.94652465824877,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,1.92792789853084,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0.582961673259701,3.70850604021019,0,0.619160603889667,0,0,0,0,0,0,0,0,0,0.609958401380546,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0.39061315453185,0.209718688851422,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0,1.6942555278512,0.920650473014354,2.29158205375759,2.06223818812425,1.37016503954128,3.0215755895588,1.35004500046361,4.5032120322422,4.53142408984205,2.5888015587591,0.62272408550506,1.19707462020309,0.512200817262403,0,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,1.28367683836726,0.252697211763798,0.50695859978048,0.188626341386076,0.655490552289177,0.576226371643824,0.17230640686684,0,0.695305955669133,0.192909220463705,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,0.476872379894642,0.290692833264657,0.470546902076653,0.507687647350059,0.73171189149109,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.492522411877817,0,0.464810523557898,0.771626443924566,0.749431733813838,0,0,0.191288332068843,0.441182838239031,0
|short_description=p3@Efr3b
}}
}}

Latest revision as of 14:42, 26 September 2015

Short description:p3@Efr3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Efr3b_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 35bp_to_ENSMUST00000077156, ENSMUST00000111178, NM_001082483, uc007mxh.1_5end
EntrezGene:Efr3b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Efr3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.64e-4354
central nervous system7.70e-4173
neural tube1.25e-4052
neural rod1.25e-4052
future spinal cord1.25e-4052
neural keel1.25e-4052
nervous system1.73e-3975
gray matter7.86e-3834
brain1.64e-3747
future brain1.64e-3747
regional part of brain6.33e-3646
brain grey matter9.75e-3629
regional part of telencephalon9.75e-3629
telencephalon9.75e-3629
neurectoderm2.53e-3164
neural plate2.53e-3164
presumptive neural plate2.53e-3164
anterior neural tube5.47e-3140
regional part of forebrain2.48e-2939
forebrain2.48e-2939
future forebrain2.48e-2939
ectoderm-derived structure4.32e-2995
ectoderm4.32e-2995
presumptive ectoderm4.32e-2995
ecto-epithelium2.37e-2673
pre-chordal neural plate6.10e-2449
cerebral cortex4.68e-2321
cerebral hemisphere4.68e-2321
pallium4.68e-2321
structure with developmental contribution from neural crest4.67e-1992
regional part of cerebral cortex9.45e-1717
tube1.22e-14114
occipital lobe1.57e-1410
visual cortex1.57e-1410
neocortex1.57e-1410
basal ganglion9.51e-148
nuclear complex of neuraxis9.51e-148
aggregate regional part of brain9.51e-148
collection of basal ganglia9.51e-148
cerebral subcortex9.51e-148
anatomical conduit4.33e-13122
organ system subdivision1.85e-11194
corpus striatum1.36e-095
striatum1.36e-095
ventral part of telencephalon1.36e-095
future corpus striatum1.36e-095
posterior neural tube1.48e-0912
chordal neural plate1.48e-0912
epithelium7.80e-08174
cell layer1.22e-07176
regional part of midbrain1.86e-074
midbrain1.86e-074
presumptive midbrain1.86e-074
midbrain neural tube1.86e-074
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