FFCP PHASE1:Mm9::chr18:34533156..34533174,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:34533156..34533174,-
|short_description=p2@Reep5
|description=CAGE_peak_2_at_Reep5_5end
|association_with_transcript=-87bp_to_ENSMUST00000006027,NM_007874...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13476 | |EntrezGene=13476 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8R0,Q9CQG4 | |UniProt=G3X8R0,Q9CQG4 | ||
|association_with_transcript=-87bp_to_ENSMUST00000006027,NM_007874,uc008eki.2_5end | |||
|cluster_id=chr18:34533156..34533174,- | |||
|description=CAGE_peak_2_at_Reep5_5end | |||
|id=chr18:34533156..34533174,- | |||
|ontology_enrichment_celltype=CL:0000117!1.57e-12!23;CL:0000337!1.57e-12!23;CL:0002319!7.71e-09!43;CL:0000221!1.04e-08!44;CL:0000133!1.04e-08!44;CL:0000540!4.14e-08!33;CL:0000047!4.14e-08!33;CL:0000031!4.14e-08!33;CL:0000404!4.14e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.09e-17,23;CL:0000337,6.09e-17,23;CL:0002319,4.15e-11,43;CL:0000221,1.25e-10,44;CL:0000133,1.25e-10,44;CL:0000540,2.56e-09,33;CL:0000047,2.56e-09,33;CL:0000031,2.56e-09,33;CL:0000404,2.56e-09,33;CL:0000393,9.16e-07,39;CL:0000211,9.16e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.70e-29,54;UBERON:0001049,3.57e-27,52;UBERON:0005068,3.57e-27,52;UBERON:0006241,3.57e-27,52;UBERON:0007135,3.57e-27,52;UBERON:0001017,3.32e-26,73;UBERON:0001016,5.81e-25,75;UBERON:0002020,9.39e-24,34;UBERON:0000955,1.89e-22,47;UBERON:0006238,1.89e-22,47;UBERON:0002616,1.19e-21,46;UBERON:0002346,1.50e-21,64;UBERON:0003075,1.50e-21,64;UBERON:0007284,1.50e-21,64;UBERON:0010314,2.28e-21,92;UBERON:0003080,4.79e-19,40;UBERON:0003528,5.55e-19,29;UBERON:0002791,5.55e-19,29;UBERON:0001893,5.55e-19,29;UBERON:0002780,1.81e-18,39;UBERON:0001890,1.81e-18,39;UBERON:0006240,1.81e-18,39;UBERON:0004121,1.20e-17,95;UBERON:0000924,1.20e-17,95;UBERON:0006601,1.20e-17,95;UBERON:0010371,8.93e-17,73;UBERON:0003056,9.23e-16,49;UBERON:0000956,2.73e-12,21;UBERON:0001869,2.73e-12,21;UBERON:0000203,2.73e-12,21;UBERON:0000025,5.34e-11,114;UBERON:0002619,2.72e-10,17;UBERON:0004111,3.87e-09,122;UBERON:0003076,1.11e-08,12;UBERON:0003057,1.11e-08,12;UBERON:0002420,4.35e-08,8;UBERON:0007245,4.35e-08,8;UBERON:0010009,4.35e-08,8;UBERON:0010011,4.35e-08,8;UBERON:0000454,4.35e-08,8;UBERON:0002021,6.27e-07,10;UBERON:0000411,6.27e-07,10;UBERON:0001950,6.27e-07,10;UBERON:0002240,8.81e-07,6;UBERON:0005174,8.81e-07,6;UBERON:0001137,8.81e-07,6 | |||
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| ||
|short_description=p2@Reep5 | |||
}} | }} |
Latest revision as of 04:11, 27 September 2015
Short description: | p2@Reep5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Reep5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -87bp_to_ENSMUST00000006027, NM_007874, uc008eki.2_5end |
EntrezGene: | Reep5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.09e-17 | 23 |
neuroblast (sensu Vertebrata) | 6.09e-17 | 23 |
neural cell | 4.15e-11 | 43 |
ectodermal cell | 1.25e-10 | 44 |
neurectodermal cell | 1.25e-10 | 44 |
neuron | 2.56e-09 | 33 |
neuronal stem cell | 2.56e-09 | 33 |
neuroblast | 2.56e-09 | 33 |
electrically signaling cell | 2.56e-09 | 33 |
electrically responsive cell | 9.16e-07 | 39 |
electrically active cell | 9.16e-07 | 39 |