FFCP PHASE1:Mm9::chr1:134776977..134777031,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:134776977..134777031,+
|short_description=p2@Lrrn2
|description=CAGE_peak_2_at_Lrrn2_5end
|association_with_transcript=45bp_to_ENSMUST00000159088,NM_010732...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16980 | |EntrezGene=16980 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PHP6 | |UniProt=Q6PHP6 | ||
|association_with_transcript=45bp_to_ENSMUST00000159088,NM_010732,uc007cpi.2_5end | |||
|cluster_id=chr1:134776977..134777031,+ | |||
|description=CAGE_peak_2_at_Lrrn2_5end | |||
|id=chr1:134776977..134777031,+ | |||
|ontology_enrichment_celltype=CL:0002319!9.44e-14!43;CL:0000221!1.02e-13!44;CL:0000133!1.02e-13!44;CL:0000540!4.56e-13!33;CL:0000047!4.56e-13!33;CL:0000031!4.56e-13!33;CL:0000404!4.56e-13!33;CL:0000117!8.55e-13!23;CL:0000337!8.55e-13!23;CL:0000055!8.42e-10!50;CL:0000393!9.89e-09!39;CL:0000211!9.89e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-15,23;CL:0000337,1.17e-15,23;CL:0002319,7.03e-15,43;CL:0000221,3.25e-14,44;CL:0000133,3.25e-14,44;CL:0000540,1.65e-13,33;CL:0000047,1.65e-13,33;CL:0000031,1.65e-13,33;CL:0000404,1.65e-13,33;CL:0000393,1.06e-09,39;CL:0000211,1.06e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.83e-34!73;UBERON:0005743!2.83e-34!73;UBERON:0000073!1.05e-32!75;UBERON:0001016!1.05e-32!75;UBERON:0004121!9.19e-31!102;UBERON:0000924!9.19e-31!102;UBERON:0006601!9.19e-31!102;UBERON:0002346!4.80e-27!71;UBERON:0003075!4.80e-27!71;UBERON:0007284!4.80e-27!71;UBERON:0001049!7.63e-27!52;UBERON:0005068!7.63e-27!52;UBERON:0006241!7.63e-27!52;UBERON:0007135!7.63e-27!52;UBERON:0000955!3.91e-26!50;UBERON:0006238!3.91e-26!50;UBERON:0002616!1.64e-25!49;UBERON:0000033!6.91e-23!63;UBERON:0003080!2.14e-21!40;UBERON:0002780!1.04e-20!39;UBERON:0001890!1.04e-20!39;UBERON:0006240!1.04e-20!39;UBERON:0002020!6.92e-20!34;UBERON:0003056!8.28e-20!49;UBERON:0002791!3.67e-17!29;UBERON:0003528!3.67e-17!29;UBERON:0001893!3.67e-17!29;UBERON:0000956!2.36e-12!21;UBERON:0001869!2.36e-12!21;UBERON:0000203!2.36e-12!21;UBERON:0000025!5.54e-11!114;UBERON:0002619!1.68e-10!17;UBERON:0004111!5.03e-10!122;UBERON:0007811!7.77e-09!86;UBERON:0000153!7.53e-08!94;UBERON:0002021!1.53e-07!10;UBERON:0000411!1.53e-07!10;UBERON:0001950!1.53e-07!10;UBERON:0000468!7.85e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.10e-40,73;UBERON:0001016,3.86e-38,75;UBERON:0000073,7.17e-36,54;UBERON:0001049,9.12e-34,52;UBERON:0005068,9.12e-34,52;UBERON:0006241,9.12e-34,52;UBERON:0007135,9.12e-34,52;UBERON:0002346,5.00e-31,64;UBERON:0003075,5.00e-31,64;UBERON:0007284,5.00e-31,64;UBERON:0004121,1.60e-30,95;UBERON:0000924,1.60e-30,95;UBERON:0006601,1.60e-30,95;UBERON:0000955,5.50e-30,47;UBERON:0006238,5.50e-30,47;UBERON:0002616,3.23e-29,46;UBERON:0010314,6.83e-29,92;UBERON:0003080,1.82e-26,40;UBERON:0010371,1.06e-25,73;UBERON:0002780,1.33e-25,39;UBERON:0001890,1.33e-25,39;UBERON:0006240,1.33e-25,39;UBERON:0002020,1.43e-24,34;UBERON:0003056,5.03e-24,49;UBERON:0003528,3.82e-21,29;UBERON:0002791,3.82e-21,29;UBERON:0001893,3.82e-21,29;UBERON:0000956,4.20e-15,21;UBERON:0001869,4.20e-15,21;UBERON:0000203,4.20e-15,21;UBERON:0002619,8.83e-13,17;UBERON:0000025,2.12e-12,114;UBERON:0004111,1.48e-10,122;UBERON:0002021,4.53e-09,10;UBERON:0000411,4.53e-09,10;UBERON:0001950,4.53e-09,10;UBERON:0003076,1.40e-07,12;UBERON:0003057,1.40e-07,12;UBERON:0002420,3.33e-07,8;UBERON:0007245,3.33e-07,8;UBERON:0010009,3.33e-07,8;UBERON:0010011,3.33e-07,8;UBERON:0000454,3.33e-07,8 | |||
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| ||
|short_description=p2@Lrrn2 | |||
}} | }} |
Latest revision as of 09:13, 26 September 2015
Short description: | p2@Lrrn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lrrn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 45bp_to_ENSMUST00000159088, NM_010732, uc007cpi.2_5end |
EntrezGene: | Lrrn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.17e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.17e-15 | 23 |
neural cell | 7.03e-15 | 43 |
ectodermal cell | 3.25e-14 | 44 |
neurectodermal cell | 3.25e-14 | 44 |
neuron | 1.65e-13 | 33 |
neuronal stem cell | 1.65e-13 | 33 |
neuroblast | 1.65e-13 | 33 |
electrically signaling cell | 1.65e-13 | 33 |
electrically responsive cell | 1.06e-09 | 39 |
electrically active cell | 1.06e-09 | 39 |