FFCP PHASE1:Mm9::chr1:42724483..42724518,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:42724483..42724518,-
|short_description=p3@2610017I09Rik
|description=CAGE_peak_3_at_2610017I09Rik_5end
|association_with_transcript=0bp_to_uc007aur.1_5end...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66297 | |EntrezGene=66297 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc007aur.1_5end | |||
|cluster_id=chr1:42724483..42724518,- | |||
|description=CAGE_peak_3_at_2610017I09Rik_5end | |||
|id=chr1:42724483..42724518,- | |||
|ontology_enrichment_celltype=CL:0000221!4.20e-09!44;CL:0000133!4.20e-09!44;CL:0002319!1.43e-08!43;CL:0002453!2.32e-08!8;CL:0000117!3.40e-07!23;CL:0000337!3.40e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.22e-11,43;CL:0000221,2.85e-11,44;CL:0000133,2.85e-11,44;CL:0002453,7.79e-11,8;CL:0000333,1.84e-08,10;CL:0000095,1.84e-08,10;CL:0000243,1.84e-08,10;CL:0000123,1.84e-08,10;CL:0000125,1.84e-08,10;CL:0000030,1.84e-08,10;CL:0000339,1.84e-08,10;CL:0000117,6.24e-08,23;CL:0000337,6.24e-08,23;CL:0000128,1.64e-07,6;CL:0000126,1.64e-07,6;CL:0000127,1.64e-07,6;CL:0002614,6.50e-07,3;CL:0002610,9.83e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.96e-34!73;UBERON:0005743!1.96e-34!73;UBERON:0000073!5.13e-33!75;UBERON:0001016!5.13e-33!75;UBERON:0000955!3.75e-32!50;UBERON:0006238!3.75e-32!50;UBERON:0001049!1.35e-31!52;UBERON:0005068!1.35e-31!52;UBERON:0006241!1.35e-31!52;UBERON:0007135!1.35e-31!52;UBERON:0002616!4.13e-31!49;UBERON:0000033!4.77e-29!63;UBERON:0004121!3.21e-23!102;UBERON:0000924!3.21e-23!102;UBERON:0006601!3.21e-23!102;UBERON:0003080!1.31e-22!40;UBERON:0002780!1.14e-21!39;UBERON:0001890!1.14e-21!39;UBERON:0006240!1.14e-21!39;UBERON:0002346!4.47e-21!71;UBERON:0003075!4.47e-21!71;UBERON:0007284!4.47e-21!71;UBERON:0002020!4.06e-20!34;UBERON:0003056!1.71e-18!49;UBERON:0007811!6.89e-18!86;UBERON:0002791!1.27e-17!29;UBERON:0003528!1.27e-17!29;UBERON:0001893!1.27e-17!29;UBERON:0000153!7.06e-16!94;UBERON:0002021!6.77e-13!10;UBERON:0000411!6.77e-13!10;UBERON:0001950!6.77e-13!10;UBERON:0002619!8.47e-13!17;UBERON:0000956!2.59e-12!21;UBERON:0001869!2.59e-12!21;UBERON:0000203!2.59e-12!21;UBERON:0003076!2.67e-09!12;UBERON:0003057!2.67e-09!12;UBERON:0004111!1.07e-08!122;UBERON:0000025!2.55e-08!114;UBERON:0002298!4.56e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.75e-46,73;UBERON:0000073,1.41e-44,54;UBERON:0001016,1.41e-44,75;UBERON:0001049,9.28e-41,52;UBERON:0005068,9.28e-41,52;UBERON:0006241,9.28e-41,52;UBERON:0007135,9.28e-41,52;UBERON:0000955,7.35e-36,47;UBERON:0006238,7.35e-36,47;UBERON:0002616,3.28e-34,46;UBERON:0004121,3.04e-33,95;UBERON:0000924,3.04e-33,95;UBERON:0006601,3.04e-33,95;UBERON:0002020,4.50e-33,34;UBERON:0002346,1.55e-31,64;UBERON:0003075,1.55e-31,64;UBERON:0007284,1.55e-31,64;UBERON:0010371,1.50e-28,73;UBERON:0003528,3.13e-28,29;UBERON:0002791,3.13e-28,29;UBERON:0001893,3.13e-28,29;UBERON:0003080,1.25e-27,40;UBERON:0002780,4.11e-26,39;UBERON:0001890,4.11e-26,39;UBERON:0006240,4.11e-26,39;UBERON:0002619,7.09e-23,17;UBERON:0002021,7.90e-22,10;UBERON:0000411,7.90e-22,10;UBERON:0001950,7.90e-22,10;UBERON:0003056,2.44e-21,49;UBERON:0010314,7.02e-21,92;UBERON:0000956,9.84e-21,21;UBERON:0001869,9.84e-21,21;UBERON:0000203,9.84e-21,21;UBERON:0000025,5.16e-14,114;UBERON:0004111,1.22e-13,122;UBERON:0003076,3.41e-13,12;UBERON:0003057,3.41e-13,12;UBERON:0011216,1.91e-11,194;UBERON:0002950,1.62e-08,4;UBERON:0001891,1.62e-08,4;UBERON:0009616,1.62e-08,4;UBERON:0010286,1.62e-08,4;UBERON:0002420,1.68e-08,8;UBERON:0007245,1.68e-08,8;UBERON:0010009,1.68e-08,8;UBERON:0010011,1.68e-08,8;UBERON:0000454,1.68e-08,8;UBERON:0004733,1.59e-07,6;UBERON:0004732,1.59e-07,6;UBERON:0002028,1.59e-07,6;UBERON:0007277,1.59e-07,6;UBERON:0002240,3.48e-07,6;UBERON:0005174,3.48e-07,6;UBERON:0001137,3.48e-07,6;UBERON:0000483,4.84e-07,174;UBERON:0002038,6.50e-07,3;UBERON:0009663,6.50e-07,3;UBERON:0009661,6.50e-07,3;UBERON:0000125,6.50e-07,3;UBERON:0002308,6.50e-07,3;UBERON:0000119,7.23e-07,176;UBERON:0004684,9.83e-07,3;UBERON:0002275,9.83e-07,3 | |||
|phase1_expression=15.6945870162698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,4.61340983742391,4.47188767870852,3.21968769738334,7.18762821824858,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0,0,10.1864037576258,12.6792040756113,0,0.135005938331691,0,3.71346279724945,5.07997644188711,0,0,0,12.1127469099328,7.40586560894089,12.1349161272432,1.18697658957174,0.548925861614458,0,5.58365998002762,18.0084035210138,20.4749652020926,4.71405736757868,2.84743361598206,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80615036115011,5.86450779077674,0,0,0,0,5.84183493678809,32.0250421973039,4.14659361972453,32.1574992355711,16.3657892691412,16.6230435647648,17.6842976743856,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,51.310747449647,5.65975368086064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,3.53211297973142,5.15731421005694,0,0,0,0,0,0,0,0,0,0,0,7.39039027770156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0.709360934569094,1.07021290561242,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,18.0720589637461,27.6195141904306,33.8008352929244,28.0120687220211,42.4751162257798,50.6113911251099,42.5264175146038,42.3301931030767,32.6262534468627,26.4057758993428,0,0,0.512200817262403,0,0,0.367687016900028,0.222246727801615,0.824140228955577,0,0,0.760437899670719,0.188626341386076,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.824171801606613,0.147198920134397,0,0.354951612318675,0,0.581385666529314,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=15.6945870162698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,4.61340983742391,4.47188767870852,3.21968769738334,7.18762821824858,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0,0,10.1864037576258,12.6792040756113,0,0.135005938331691,0,3.71346279724945,5.07997644188711,0,0,0,12.1127469099328,7.40586560894089,12.1349161272432,1.18697658957174,0.548925861614458,0,5.58365998002762,18.0084035210138,20.4749652020926,4.71405736757868,2.84743361598206,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80615036115011,5.86450779077674,0,0,0,0,5.84183493678809,32.0250421973039,4.14659361972453,32.1574992355711,16.3657892691412,16.6230435647648,17.6842976743856,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,51.310747449647,5.65975368086064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,3.53211297973142,5.15731421005694,0,0,0,0,0,0,0,0,0,0,0,7.39039027770156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0.709360934569094,1.07021290561242,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,18.0720589637461,27.6195141904306,33.8008352929244,28.0120687220211,42.4751162257798,50.6113911251099,42.5264175146038,42.3301931030767,32.6262534468627,26.4057758993428,0,0,0.512200817262403,0,0,0.367687016900028,0.222246727801615,0.824140228955577,0,0,0.760437899670719,0.188626341386076,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.824171801606613,0.147198920134397,0,0.354951612318675,0,0.581385666529314,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p3@2610017I09Rik | |||
}} | }} |
Latest revision as of 03:45, 27 September 2015
Short description: | p3@2610017I09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_2610017I09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_uc007aur.1_5end |
EntrezGene: | 2610017I09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.22e-11 | 43 |
ectodermal cell | 2.85e-11 | 44 |
neurectodermal cell | 2.85e-11 | 44 |
oligodendrocyte precursor cell | 7.79e-11 | 8 |
migratory neural crest cell | 1.84e-08 | 10 |
neuron associated cell | 1.84e-08 | 10 |
glial cell (sensu Vertebrata) | 1.84e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.84e-08 | 10 |
glial cell | 1.84e-08 | 10 |
glioblast | 1.84e-08 | 10 |
glioblast (sensu Vertebrata) | 1.84e-08 | 10 |
CNS neuron (sensu Vertebrata) | 6.24e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.24e-08 | 23 |
oligodendrocyte | 1.64e-07 | 6 |
macroglial cell | 1.64e-07 | 6 |
astrocyte | 1.64e-07 | 6 |
neuron of the substantia nigra | 6.50e-07 | 3 |
raphe nuclei neuron | 9.83e-07 | 3 |