Personal tools

FFCP PHASE1:Mm9::chr2:179839168..179839183,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr2:179839168..179839183,- |short_description=p1@Hrh3 |description=CAGE_peak_1_at_Hrh3_5end |association_with_transcript=9bp_to_ENSMUST00000056480_5end |Entre...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:179839168..179839183,-
|DHSsupport=NA
|short_description=p1@Hrh3
|DPIdataset=NA
|description=CAGE_peak_1_at_Hrh3_5end
|association_with_transcript=9bp_to_ENSMUST00000056480_5end
|EntrezGene=99296
|EntrezGene=99296
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P58406
|UniProt=P58406
|association_with_transcript=9bp_to_ENSMUST00000056480_5end
|cluster_id=chr2:179839168..179839183,-
|description=CAGE_peak_1_at_Hrh3_5end
|id=chr2:179839168..179839183,-
|ontology_enrichment_celltype=CL:0000117!4.49e-16!23;CL:0000337!4.49e-16!23;CL:0000540!9.27e-15!33;CL:0000047!9.27e-15!33;CL:0000031!9.27e-15!33;CL:0000404!9.27e-15!33;CL:0002319!3.66e-11!43;CL:0000393!1.13e-10!39;CL:0000211!1.13e-10!39;CL:0000221!1.24e-10!44;CL:0000133!1.24e-10!44;CL:0000055!5.68e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,6.21e-27,23;CL:0000337,6.21e-27,23;CL:0000540,6.73e-17,33;CL:0000047,6.73e-17,33;CL:0000031,6.73e-17,33;CL:0000404,6.73e-17,33;CL:0000393,2.22e-13,39;CL:0000211,2.22e-13,39;CL:0002319,8.33e-13,43;CL:0000221,2.24e-12,44;CL:0000133,2.24e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.81e-35!73;UBERON:0005743!3.81e-35!73;UBERON:0000073!1.92e-33!75;UBERON:0001016!1.92e-33!75;UBERON:0000033!3.74e-31!63;UBERON:0001049!1.17e-30!52;UBERON:0005068!1.17e-30!52;UBERON:0006241!1.17e-30!52;UBERON:0007135!1.17e-30!52;UBERON:0000955!4.28e-30!50;UBERON:0006238!4.28e-30!50;UBERON:0002346!4.50e-30!71;UBERON:0003075!4.50e-30!71;UBERON:0007284!4.50e-30!71;UBERON:0002616!2.82e-29!49;UBERON:0004121!7.33e-29!102;UBERON:0000924!7.33e-29!102;UBERON:0006601!7.33e-29!102;UBERON:0003056!2.40e-27!49;UBERON:0007811!2.15e-24!86;UBERON:0003080!5.14e-24!40;UBERON:0002780!3.32e-23!39;UBERON:0001890!3.32e-23!39;UBERON:0006240!3.32e-23!39;UBERON:0002020!2.08e-21!34;UBERON:0000153!9.69e-21!94;UBERON:0002791!2.98e-18!29;UBERON:0003528!2.98e-18!29;UBERON:0001893!2.98e-18!29;UBERON:0000956!1.39e-12!21;UBERON:0001869!1.39e-12!21;UBERON:0000203!1.39e-12!21;UBERON:0002619!2.58e-10!17;UBERON:0002021!1.11e-09!10;UBERON:0000411!1.11e-09!10;UBERON:0001950!1.11e-09!10;UBERON:0003076!4.78e-07!12;UBERON:0003057!4.78e-07!12;UBERON:0002420!6.19e-07!8;UBERON:0007245!6.19e-07!8;UBERON:0010009!6.19e-07!8;UBERON:0010011!6.19e-07!8;UBERON:0000454!6.19e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.19e-49,54;UBERON:0001049,1.92e-45,52;UBERON:0005068,1.92e-45,52;UBERON:0006241,1.92e-45,52;UBERON:0007135,1.92e-45,52;UBERON:0001017,2.51e-45,73;UBERON:0001016,8.84e-44,75;UBERON:0000955,3.64e-39,47;UBERON:0006238,3.64e-39,47;UBERON:0002346,7.74e-39,64;UBERON:0003075,7.74e-39,64;UBERON:0007284,7.74e-39,64;UBERON:0002020,1.88e-38,34;UBERON:0002616,1.01e-37,46;UBERON:0004121,3.11e-35,95;UBERON:0000924,3.11e-35,95;UBERON:0006601,3.11e-35,95;UBERON:0003080,2.97e-34,40;UBERON:0002780,8.60e-33,39;UBERON:0001890,8.60e-33,39;UBERON:0006240,8.60e-33,39;UBERON:0010371,1.35e-32,73;UBERON:0003528,2.05e-32,29;UBERON:0002791,2.05e-32,29;UBERON:0001893,2.05e-32,29;UBERON:0003056,3.33e-30,49;UBERON:0010314,1.91e-23,92;UBERON:0000956,1.29e-21,21;UBERON:0001869,1.29e-21,21;UBERON:0000203,1.29e-21,21;UBERON:0002619,1.94e-19,17;UBERON:0002021,4.89e-17,10;UBERON:0000411,4.89e-17,10;UBERON:0001950,4.89e-17,10;UBERON:0000025,1.78e-15,114;UBERON:0004111,1.18e-14,122;UBERON:0002420,8.14e-12,8;UBERON:0007245,8.14e-12,8;UBERON:0010009,8.14e-12,8;UBERON:0010011,8.14e-12,8;UBERON:0000454,8.14e-12,8;UBERON:0003076,7.34e-11,12;UBERON:0003057,7.34e-11,12;UBERON:0011216,7.42e-10,194;UBERON:0002240,2.74e-08,6;UBERON:0005174,2.74e-08,6;UBERON:0001137,2.74e-08,6;UBERON:0000483,1.26e-07,174;UBERON:0000369,1.26e-07,5;UBERON:0002435,1.26e-07,5;UBERON:0000204,1.26e-07,5;UBERON:0010082,1.26e-07,5;UBERON:0000119,2.05e-07,176;UBERON:0002950,3.65e-07,4;UBERON:0001891,3.65e-07,4;UBERON:0009616,3.65e-07,4;UBERON:0010286,3.65e-07,4;UBERON:0001948,5.60e-07,5;UBERON:0002315,5.60e-07,5
|phase1_expression=0.320297694209588,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26971862646661,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,4.65327859977075,5.81890077199236,5.70448263155561,0,0,0,0,0,0,0,0.725827286159344,1.08004750665353,1.05162480675691,4.57041575046086,3.09215957332259,2.20483438586917,2.01275489138296,2.75765635983006,88.092704799511,69.5895992564273,63.4394982348286,5.27545150920775,3.01909223887952,3.64639359389732,32.3852278841602,43.3327209724394,41.1027286519619,2.94628585473668,2.27794689278565,1.67759501242771,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,10.5401086924157,8.58731497935166,0,0,0,0,38.9455662452539,91.0426199609067,1.25654352112864,71.2679712788333,53.1888151247088,71.8946634176078,63.598575122561,0,0.248813941220186,1.0108910337347,3.15662783829711,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.612328492361951,0.768682321709099,0.468508622798644,7.24369438069244,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.4875515645169,2.46971069710283,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,23.2798355482298,15.4719426301708,0,0,0,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,21.5285282002611,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0.388076051348264,1.28602221018955,0.709360934569094,0.535106452806212,0.658196082408484,1.522324745573,0,0,0.220528398054962,0.32977250588296,0,0,0,0.164140899745061,0,15.9465759729038,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0,0,0.129920822977795,0.358053391334963,0.198681354781265,0,0.295379054349154,0.302899349844443,0.228620419965,0.201652370273681,0,0.288635524920988,0.467507608726276,0,0,0,0,2.31827512838629,0,0,0,0,48.5686584650677,51.0961012522966,49.8419096692275,43.478855132953,53.4364365421101,85.3595104050362,65.4771825224852,60.3430412320455,59.814797985915,82.8416498802912,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0.824140228955577,0.320919209591815,0,0.50695859978048,0.565879024158229,0,0.640251524048693,0.402048282689293,0.952587382566147,0.115884325944855,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.548783918618318,0,0,0,0.593175090620871,0.591026894253381,0,0.309873682371932,0.385813221962283,1.24905288968973,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26971862646661,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,4.65327859977075,5.81890077199236,5.70448263155561,0,0,0,0,0,0,0,0.725827286159344,1.08004750665353,1.05162480675691,4.57041575046086,3.09215957332259,2.20483438586917,2.01275489138296,2.75765635983006,88.092704799511,69.5895992564273,63.4394982348286,5.27545150920775,3.01909223887952,3.64639359389732,32.3852278841602,43.3327209724394,41.1027286519619,2.94628585473668,2.27794689278565,1.67759501242771,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,10.5401086924157,8.58731497935166,0,0,0,0,38.9455662452539,91.0426199609067,1.25654352112864,71.2679712788333,53.1888151247088,71.8946634176078,63.598575122561,0,0.248813941220186,1.0108910337347,3.15662783829711,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.612328492361951,0.768682321709099,0.468508622798644,7.24369438069244,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.4875515645169,2.46971069710283,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,23.2798355482298,15.4719426301708,0,0,0,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,21.5285282002611,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0.388076051348264,1.28602221018955,0.709360934569094,0.535106452806212,0.658196082408484,1.522324745573,0,0,0.220528398054962,0.32977250588296,0,0,0,0.164140899745061,0,15.9465759729038,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0,0,0.129920822977795,0.358053391334963,0.198681354781265,0,0.295379054349154,0.302899349844443,0.228620419965,0.201652370273681,0,0.288635524920988,0.467507608726276,0,0,0,0,2.31827512838629,0,0,0,0,48.5686584650677,51.0961012522966,49.8419096692275,43.478855132953,53.4364365421101,85.3595104050362,65.4771825224852,60.3430412320455,59.814797985915,82.8416498802912,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0.824140228955577,0.320919209591815,0,0.50695859978048,0.565879024158229,0,0.640251524048693,0.402048282689293,0.952587382566147,0.115884325944855,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.548783918618318,0,0,0,0.593175090620871,0.591026894253381,0,0.309873682371932,0.385813221962283,1.24905288968973,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p1@Hrh3
}}
}}

Latest revision as of 07:19, 26 September 2015

Short description:p1@Hrh3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hrh3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 9bp_to_ENSMUST00000056480_5end
EntrezGene:Hrh3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hrh3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D388.09
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F369.59
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D763.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E432.39
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I641.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A438.95
corpus striatum, adult.CNhs10487.19-21D891.04
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D571.27
cortex, neonate N30.CNhs11107.1392-42F253.19
diencephalon, adult.CNhs10482.20-12F271.89
diencephalon, neonate N30.CNhs11201.1388-42B263.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E834.49
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C223.28
medulla oblongata, neonate N30.CNhs11200.1396-42A315.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I921.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A148.57
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A251.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A349.84
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D743.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A453.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A585.36
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A665.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A760.34
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A859.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A982.84
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.21e-2723
neuroblast (sensu Vertebrata)6.21e-2723
neuron6.73e-1733
neuronal stem cell6.73e-1733
neuroblast6.73e-1733
electrically signaling cell6.73e-1733
electrically responsive cell2.22e-1339
electrically active cell2.22e-1339
neural cell8.33e-1343
ectodermal cell2.24e-1244
neurectodermal cell2.24e-1244

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.19e-4954
neural tube1.92e-4552
neural rod1.92e-4552
future spinal cord1.92e-4552
neural keel1.92e-4552
central nervous system2.51e-4573
nervous system8.84e-4475
brain3.64e-3947
future brain3.64e-3947
neurectoderm7.74e-3964
neural plate7.74e-3964
presumptive neural plate7.74e-3964
gray matter1.88e-3834
regional part of brain1.01e-3746
ectoderm-derived structure3.11e-3595
ectoderm3.11e-3595
presumptive ectoderm3.11e-3595
anterior neural tube2.97e-3440
regional part of forebrain8.60e-3339
forebrain8.60e-3339
future forebrain8.60e-3339
ecto-epithelium1.35e-3273
brain grey matter2.05e-3229
regional part of telencephalon2.05e-3229
telencephalon2.05e-3229
pre-chordal neural plate3.33e-3049
structure with developmental contribution from neural crest1.91e-2392
cerebral cortex1.29e-2121
cerebral hemisphere1.29e-2121
pallium1.29e-2121
regional part of cerebral cortex1.94e-1917
occipital lobe4.89e-1710
visual cortex4.89e-1710
neocortex4.89e-1710
tube1.78e-15114
anatomical conduit1.18e-14122
basal ganglion8.14e-128
nuclear complex of neuraxis8.14e-128
aggregate regional part of brain8.14e-128
collection of basal ganglia8.14e-128
cerebral subcortex8.14e-128
posterior neural tube7.34e-1112
chordal neural plate7.34e-1112
organ system subdivision7.42e-10194
spinal cord2.74e-086
dorsal region element2.74e-086
dorsum2.74e-086
epithelium1.26e-07174
corpus striatum1.26e-075
striatum1.26e-075
ventral part of telencephalon1.26e-075
future corpus striatum1.26e-075
cell layer2.05e-07176
regional part of midbrain3.65e-074
midbrain3.65e-074
presumptive midbrain3.65e-074
midbrain neural tube3.65e-074
regional part of spinal cord5.60e-075
gray matter of spinal cord5.60e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:179839168..179839183,-&oldid=4240552"