FFCP PHASE1:Mm9::chr5:131783964..131783990,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:131783964..131783990,-
|short_description=p5@Wbscr17
|description=CAGE_peak_5_at_Wbscr17_5end
|association_with_transcript=-16bp_to_ENSMUST00000162966_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=212996 | |EntrezGene=212996 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENSMUST00000162966_5end | |||
|cluster_id=chr5:131783964..131783990,- | |||
|description=CAGE_peak_5_at_Wbscr17_5end | |||
|id=chr5:131783964..131783990,- | |||
|ontology_enrichment_celltype=CL:0002319!6.51e-15!43;CL:0000540!1.03e-14!33;CL:0000047!1.03e-14!33;CL:0000031!1.03e-14!33;CL:0000404!1.03e-14!33;CL:0000221!1.05e-14!44;CL:0000133!1.05e-14!44;CL:0000117!4.18e-13!23;CL:0000337!4.18e-13!23;CL:0000393!2.90e-12!39;CL:0000211!2.90e-12!39;CL:0000055!3.19e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.74e-25,23;CL:0000337,3.74e-25,23;CL:0000540,1.22e-21,33;CL:0000047,1.22e-21,33;CL:0000031,1.22e-21,33;CL:0000404,1.22e-21,33;CL:0002319,7.13e-19,43;CL:0000393,2.13e-18,39;CL:0000211,2.13e-18,39;CL:0000221,3.06e-18,44;CL:0000133,3.06e-18,44;CL:0002321,4.51e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.66e-31!75;UBERON:0001016!2.66e-31!75;UBERON:0001017!3.79e-31!73;UBERON:0005743!3.79e-31!73;UBERON:0004121!1.17e-26!102;UBERON:0000924!1.17e-26!102;UBERON:0006601!1.17e-26!102;UBERON:0002346!6.60e-24!71;UBERON:0003075!6.60e-24!71;UBERON:0007284!6.60e-24!71;UBERON:0001049!1.74e-23!52;UBERON:0005068!1.74e-23!52;UBERON:0006241!1.74e-23!52;UBERON:0007135!1.74e-23!52;UBERON:0000955!2.18e-22!50;UBERON:0006238!2.18e-22!50;UBERON:0002616!7.82e-22!49;UBERON:0000033!2.99e-20!63;UBERON:0002020!1.17e-19!34;UBERON:0003080!5.69e-18!40;UBERON:0003056!1.25e-17!49;UBERON:0002780!2.03e-17!39;UBERON:0001890!2.03e-17!39;UBERON:0006240!2.03e-17!39;UBERON:0002791!2.31e-16!29;UBERON:0003528!2.31e-16!29;UBERON:0001893!2.31e-16!29;UBERON:0000956!1.78e-11!21;UBERON:0001869!1.78e-11!21;UBERON:0000203!1.78e-11!21;UBERON:0000153!3.07e-10!94;UBERON:0002619!1.87e-09!17;UBERON:0007811!4.09e-09!86;UBERON:0000025!5.44e-08!114;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10;UBERON:0004111!1.38e-07!122;UBERON:0000468!2.78e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-42,73;UBERON:0001016,4.85e-41,75;UBERON:0000073,5.51e-40,54;UBERON:0002020,4.21e-38,34;UBERON:0001049,1.24e-36,52;UBERON:0005068,1.24e-36,52;UBERON:0006241,1.24e-36,52;UBERON:0007135,1.24e-36,52;UBERON:0003528,1.41e-31,29;UBERON:0002791,1.41e-31,29;UBERON:0001893,1.41e-31,29;UBERON:0000955,2.26e-30,47;UBERON:0006238,2.26e-30,47;UBERON:0004121,2.57e-30,95;UBERON:0000924,2.57e-30,95;UBERON:0006601,2.57e-30,95;UBERON:0002616,2.35e-29,46;UBERON:0002346,1.13e-28,64;UBERON:0003075,1.13e-28,64;UBERON:0007284,1.13e-28,64;UBERON:0003080,3.28e-26,40;UBERON:0002780,3.51e-25,39;UBERON:0001890,3.51e-25,39;UBERON:0006240,3.51e-25,39;UBERON:0010371,1.56e-23,73;UBERON:0000956,6.34e-22,21;UBERON:0001869,6.34e-22,21;UBERON:0000203,6.34e-22,21;UBERON:0010314,5.93e-21,92;UBERON:0003056,7.72e-21,49;UBERON:0002619,6.00e-18,17;UBERON:0000025,1.30e-13,114;UBERON:0002021,1.54e-13,10;UBERON:0000411,1.54e-13,10;UBERON:0001950,1.54e-13,10;UBERON:0004111,7.17e-12,122;UBERON:0002420,1.34e-10,8;UBERON:0007245,1.34e-10,8;UBERON:0010009,1.34e-10,8;UBERON:0010011,1.34e-10,8;UBERON:0000454,1.34e-10,8;UBERON:0003076,1.68e-10,12;UBERON:0003057,1.68e-10,12;UBERON:0002240,2.64e-08,6;UBERON:0005174,2.64e-08,6;UBERON:0001137,2.64e-08,6;UBERON:0001948,1.75e-07,5;UBERON:0002315,1.75e-07,5;UBERON:0000369,3.42e-07,5;UBERON:0002435,3.42e-07,5;UBERON:0000204,3.42e-07,5;UBERON:0010082,3.42e-07,5 | |||
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| |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0.436050312760893,1.97717564461025,1.74986909166855,0.279972843250725,1.43752564364972,0,0,0,0,1.14613375975503,0,2.22548106945558,3.70293685490423,5.07065122804943,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,1.45165457231869,2.97013064329719,1.47227472945967,3.42781181284564,4.8591079009355,2.81728838194394,2.1086003624012,0,5.50579404996943,5.36286819957788,5.37622866396852,4.61602007055678,2.37867873366265,5.2091337055676,4.4669279840221,3.37657566019008,4.27835093775068,5.00868595305235,5.12538050876771,2.42319279572891,0.37863096666592,0.755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.593768556259299,1.21439728736295,0.304465478312141,0.922461989024234,0.60289056221049,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0.969750506270444,0,6.14839673724249,6.49284791121711,0.255457055208591,0,0,0,2.69623150928681,3.20250421973039,3.76963056338593,4.69325664519146,2.81287003063364,3.32460871295296,5.51620294430376,0.712875546952214,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,0.408218994907967,0.640568601424249,0.562210347358373,1.03481348295606,0.431135985865684,0.756424320671277,0.879755620819744,0.657587197282725,0.834141747676794,1.0447564995665,0.823128545631774,0.199034266818493,0,0,0,1.03562886267751,0.469052119962192,1.2604344302271,0.710234206755631,0.393528463494808,0.154267112887378,1.16266972375204,0.268273401399619,0.116765342367169,0.658239399653922,0.492502392237286,0.162137619091711,0.146199987425332,0.439100230582101,0.805238512562231,4.83666881697493,2.36680608472354,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0.444756087689741,0,0,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0.432276099749388,0,0,0.456994050438915,0,0.407302655690628,0.387904974335251,0.280543279561274,0.252946148497029,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,2.72936002979246,3.16471553798949,0.327869890753351,1.51482556322624,0.631016438832513,0.390438744296638,0.646270193198397,0.477937595905104,0.668396022247182,1.41538265394416,1.21443210502468,1.16902343164525,1.97643888973262,2.24924921495265,0.283880170416537,0.890328018336276,0.325773918707152,1.81467135269789,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0.643011105094777,0.709360934569094,0.535106452806212,0.493647061806363,0.913394847343798,0.23467170806371,0,0.661585194164886,0,0.322928853391811,0.301564624640779,0.358117032009409,0.164140899745061,0,1.8542530201051,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,0,0.330916980914195,0.388902376688095,0,0,0,0,0,0,0,0.316011120628178,0.608175645870493,0,0,0.358053391334963,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.579568782096571,0.93841237725591,1.09890974560359,0.428736758158132,0,3.95326289831947,4.14292712856459,4.58316410751517,3.60891682921744,2.05524755931193,6.0431511791176,4.72515750162264,6.75481804836331,4.53142408984205,4.65984280576638,0.207574695168353,0.798049746802062,0.853668028770671,1.21553358534147,0.838452650511929,0.919217542250071,0.44449345560323,0.412070114477788,1.28367683836726,0.505394423527595,0.50695859978048,0.565879024158229,0.936415074698824,1.02440243847791,1.14870937911227,1.42888107384922,1.39061191133827,0.964546102318525,4.12085900803307,0.883193520806384,0,0.177475806159338,0.953744759789284,0.872078499793971,0.752875043322645,0.676916863133412,0.182927972872773,0.263069711437843,0.950628796921032,0,0.949080144993393,0.591026894253381,0.818462086339379,1.08455788830176,0.771626443924566,1.49886346762768,1.40358965067245,0,0.57386499620653,0.220591419119515,0.463735671240843 | ||
|short_description=p5@Wbscr17 | |||
}} | }} |
Latest revision as of 23:17, 1 October 2015
Short description: | p5@Wbscr17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Wbscr17_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -16bp_to_ENSMUST00000162966_5end |
EntrezGene: | Wbscr17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.74e-25 | 23 |
neuroblast (sensu Vertebrata) | 3.74e-25 | 23 |
neuron | 1.22e-21 | 33 |
neuronal stem cell | 1.22e-21 | 33 |
neuroblast | 1.22e-21 | 33 |
electrically signaling cell | 1.22e-21 | 33 |
neural cell | 7.13e-19 | 43 |
electrically responsive cell | 2.13e-18 | 39 |
electrically active cell | 2.13e-18 | 39 |
ectodermal cell | 3.06e-18 | 44 |
neurectodermal cell | 3.06e-18 | 44 |
embryonic cell | 4.51e-09 | 70 |