FFCP PHASE1:Mm9::chr6:77192709..77192723,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:77192709..77192723,+
|short_description=p2@Lrrtm1
|description=CAGE_peak_2_at_Lrrtm1_5end
|association_with_transcript=0bp_to_ENSMUST00000161677,NM_028880,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74342 | |EntrezGene=74342 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K377 | |UniProt=Q8K377 | ||
|association_with_transcript=0bp_to_ENSMUST00000161677,NM_028880,uc009cjt.1,uc009cju.1,uc009cjv.1_5end | |||
|cluster_id=chr6:77192709..77192723,+ | |||
|description=CAGE_peak_2_at_Lrrtm1_5end | |||
|id=chr6:77192709..77192723,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.28e-13!23;CL:0000337!3.28e-13!23;CL:0000540!5.45e-10!33;CL:0000047!5.45e-10!33;CL:0000031!5.45e-10!33;CL:0000404!5.45e-10!33;CL:0000393!3.26e-07!39;CL:0000211!3.26e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-23,23;CL:0000337,1.39e-23,23;CL:0000540,2.03e-16,33;CL:0000047,2.03e-16,33;CL:0000031,2.03e-16,33;CL:0000404,2.03e-16,33;CL:0000393,4.97e-13,39;CL:0000211,4.97e-13,39;CL:0000221,3.51e-12,44;CL:0000133,3.51e-12,44;CL:0002319,2.62e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.77e-24!63;UBERON:0002346!1.24e-23!71;UBERON:0003075!1.24e-23!71;UBERON:0007284!1.24e-23!71;UBERON:0004121!1.45e-22!102;UBERON:0000924!1.45e-22!102;UBERON:0006601!1.45e-22!102;UBERON:0003056!2.47e-22!49;UBERON:0001017!2.24e-21!73;UBERON:0005743!2.24e-21!73;UBERON:0001049!4.12e-21!52;UBERON:0005068!4.12e-21!52;UBERON:0006241!4.12e-21!52;UBERON:0007135!4.12e-21!52;UBERON:0000073!1.08e-20!75;UBERON:0001016!1.08e-20!75;UBERON:0000955!7.80e-20!50;UBERON:0006238!7.80e-20!50;UBERON:0002616!2.78e-19!49;UBERON:0002020!2.23e-18!34;UBERON:0003080!2.03e-17!40;UBERON:0002780!1.07e-16!39;UBERON:0001890!1.07e-16!39;UBERON:0006240!1.07e-16!39;UBERON:0002791!3.25e-15!29;UBERON:0003528!3.25e-15!29;UBERON:0001893!3.25e-15!29;UBERON:0000153!1.12e-12!94;UBERON:0007811!8.53e-12!86;UBERON:0000956!3.12e-10!21;UBERON:0001869!3.12e-10!21;UBERON:0000203!3.12e-10!21;UBERON:0002021!1.04e-08!10;UBERON:0000411!1.04e-08!10;UBERON:0001950!1.04e-08!10;UBERON:0002619!7.36e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.69e-39,64;UBERON:0003075,2.69e-39,64;UBERON:0007284,2.69e-39,64;UBERON:0000073,1.35e-37,54;UBERON:0004121,2.06e-37,95;UBERON:0000924,2.06e-37,95;UBERON:0006601,2.06e-37,95;UBERON:0010371,1.00e-36,73;UBERON:0003056,1.39e-36,49;UBERON:0002020,1.56e-36,34;UBERON:0001017,7.25e-36,73;UBERON:0001049,1.15e-34,52;UBERON:0005068,1.15e-34,52;UBERON:0006241,1.15e-34,52;UBERON:0007135,1.15e-34,52;UBERON:0001016,1.32e-34,75;UBERON:0003528,6.45e-32,29;UBERON:0002791,6.45e-32,29;UBERON:0001893,6.45e-32,29;UBERON:0003080,7.65e-30,40;UBERON:0000955,8.60e-30,47;UBERON:0006238,8.60e-30,47;UBERON:0002616,1.12e-28,46;UBERON:0002780,2.40e-28,39;UBERON:0001890,2.40e-28,39;UBERON:0006240,2.40e-28,39;UBERON:0010314,9.04e-27,92;UBERON:0000956,5.54e-21,21;UBERON:0001869,5.54e-21,21;UBERON:0000203,5.54e-21,21;UBERON:0002021,3.99e-17,10;UBERON:0000411,3.99e-17,10;UBERON:0001950,3.99e-17,10;UBERON:0002619,8.64e-16,17;UBERON:0002420,5.21e-12,8;UBERON:0007245,5.21e-12,8;UBERON:0010009,5.21e-12,8;UBERON:0010011,5.21e-12,8;UBERON:0000454,5.21e-12,8;UBERON:0004111,8.42e-11,122;UBERON:0000025,1.55e-10,114;UBERON:0000483,7.88e-09,174;UBERON:0000119,1.32e-08,176;UBERON:0000020,2.05e-08,12;UBERON:0001032,2.05e-08,12;UBERON:0004456,2.05e-08,12;UBERON:0000369,5.17e-08,5;UBERON:0002435,5.17e-08,5;UBERON:0000204,5.17e-08,5;UBERON:0010082,5.17e-08,5;UBERON:0000033,1.22e-07,13;UBERON:0005085,1.22e-07,13;UBERON:0000970,3.58e-07,9;UBERON:0000019,3.58e-07,9;UBERON:0000047,3.58e-07,9;UBERON:0010312,3.58e-07,9;UBERON:0004088,3.58e-07,9;UBERON:0002104,3.58e-07,9;UBERON:0001456,3.58e-07,9;UBERON:0003072,3.58e-07,9;UBERON:0004128,3.58e-07,9;UBERON:0003071,3.58e-07,9;UBERON:0011216,4.06e-07,194;UBERON:0002950,4.41e-07,4;UBERON:0001891,4.41e-07,4;UBERON:0009616,4.41e-07,4;UBERON:0010286,4.41e-07,4;UBERON:0002240,7.67e-07,6;UBERON:0005174,7.67e-07,6;UBERON:0001137,7.67e-07,6 | |||
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| ||
|short_description=p2@Lrrtm1 | |||
}} | }} |
Latest revision as of 18:00, 1 October 2015
Short description: | p2@Lrrtm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lrrtm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000161677, NM_028880, uc009cjt.1, uc009cju.1, uc009cjv.1_5end |
EntrezGene: | Lrrtm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.39e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-23 | 23 |
neuron | 2.03e-16 | 33 |
neuronal stem cell | 2.03e-16 | 33 |
neuroblast | 2.03e-16 | 33 |
electrically signaling cell | 2.03e-16 | 33 |
electrically responsive cell | 4.97e-13 | 39 |
electrically active cell | 4.97e-13 | 39 |
ectodermal cell | 3.51e-12 | 44 |
neurectodermal cell | 3.51e-12 | 44 |
neural cell | 2.62e-11 | 43 |