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FFCP PHASE1:Mm9::chr7:56214459..56214498,+: Difference between revisions

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(Created page with "{{FFCP |id=chr7:56214459..56214498,+ |short_description=p3@Nav2 |description=CAGE_peak_3_at_Nav2_5end |association_with_transcript=16bp_to_NM_001111016,uc009hbd.2_5end |E...")
 
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{{FFCP
{{FFCP
|id=chr7:56214459..56214498,+
|DHSsupport=NA
|short_description=p3@Nav2
|DPIdataset=NA
|description=CAGE_peak_3_at_Nav2_5end
|association_with_transcript=16bp_to_NM_001111016,uc009hbd.2_5end
|EntrezGene=78286
|EntrezGene=78286
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q6ZPE7,Q8BJG0,Q8BYE8
|UniProt=Q6ZPE7,Q8BJG0,Q8BYE8
|association_with_transcript=16bp_to_NM_001111016,uc009hbd.2_5end
|cluster_id=chr7:56214459..56214498,+
|description=CAGE_peak_3_at_Nav2_5end
|id=chr7:56214459..56214498,+
|ontology_enrichment_celltype=CL:0000117!5.56e-13!23;CL:0000337!5.56e-13!23;CL:0000540!1.06e-07!33;CL:0000047!1.06e-07!33;CL:0000031!1.06e-07!33;CL:0000404!1.06e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,8.17e-17,23;CL:0000337,8.17e-17,23;CL:0000540,4.97e-10,33;CL:0000047,4.97e-10,33;CL:0000031,4.97e-10,33;CL:0000404,4.97e-10,33;CL:0000393,2.91e-07,39;CL:0000211,2.91e-07,39;CL:0002319,5.99e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.96e-20!63;UBERON:0001049!1.32e-19!52;UBERON:0005068!1.32e-19!52;UBERON:0006241!1.32e-19!52;UBERON:0007135!1.32e-19!52;UBERON:0003056!2.62e-19!49;UBERON:0002346!4.14e-19!71;UBERON:0003075!4.14e-19!71;UBERON:0007284!4.14e-19!71;UBERON:0000955!3.81e-18!50;UBERON:0006238!3.81e-18!50;UBERON:0001017!7.46e-18!73;UBERON:0005743!7.46e-18!73;UBERON:0002616!2.16e-17!49;UBERON:0000073!4.10e-17!75;UBERON:0001016!4.10e-17!75;UBERON:0002020!2.62e-16!34;UBERON:0003080!7.41e-16!40;UBERON:0004121!1.74e-15!102;UBERON:0000924!1.74e-15!102;UBERON:0006601!1.74e-15!102;UBERON:0002780!2.88e-15!39;UBERON:0001890!2.88e-15!39;UBERON:0006240!2.88e-15!39;UBERON:0002791!2.57e-13!29;UBERON:0003528!2.57e-13!29;UBERON:0001893!2.57e-13!29;UBERON:0007811!2.48e-10!86;UBERON:0000025!9.97e-10!114;UBERON:0000956!9.73e-09!21;UBERON:0001869!9.73e-09!21;UBERON:0000203!9.73e-09!21;UBERON:0000153!1.20e-08!94;UBERON:0004111!3.60e-08!122;UBERON:0002619!3.27e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.13e-24,64;UBERON:0003075,2.13e-24,64;UBERON:0007284,2.13e-24,64;UBERON:0000073,1.13e-23,54;UBERON:0001049,1.54e-22,52;UBERON:0005068,1.54e-22,52;UBERON:0006241,1.54e-22,52;UBERON:0007135,1.54e-22,52;UBERON:0001017,1.49e-21,73;UBERON:0003056,1.12e-20,49;UBERON:0001016,1.87e-20,75;UBERON:0002020,4.23e-20,34;UBERON:0010371,5.42e-20,73;UBERON:0004121,3.54e-19,95;UBERON:0000924,3.54e-19,95;UBERON:0006601,3.54e-19,95;UBERON:0000955,3.56e-19,47;UBERON:0006238,3.56e-19,47;UBERON:0002616,3.14e-18,46;UBERON:0003080,6.20e-17,40;UBERON:0002780,3.45e-16,39;UBERON:0001890,3.45e-16,39;UBERON:0006240,3.45e-16,39;UBERON:0003528,3.80e-16,29;UBERON:0002791,3.80e-16,29;UBERON:0001893,3.80e-16,29;UBERON:0010314,1.10e-13,92;UBERON:0000956,3.85e-10,21;UBERON:0001869,3.85e-10,21;UBERON:0000203,3.85e-10,21;UBERON:0000025,2.00e-09,114;UBERON:0004111,3.42e-08,122;UBERON:0002619,3.96e-08,17;UBERON:0002021,1.49e-07,10;UBERON:0000411,1.49e-07,10;UBERON:0001950,1.49e-07,10;UBERON:0002420,1.52e-07,8;UBERON:0007245,1.52e-07,8;UBERON:0010009,1.52e-07,8;UBERON:0010011,1.52e-07,8;UBERON:0000454,1.52e-07,8
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,21.2432283902578,18.5146842745212,13.3104594736298,0.338844532069132,0,0,0,0,1.19840044207362,1.53687322128622,3.42175720617976,2.43010688997043,2.10324961351382,5.14171771926846,3.75476519617743,3.06226998037385,3.73797336971122,1.83843757322004,2.20231761998777,2.55374676170375,3.07213066512487,20.9699197491008,19.1209175129036,18.7528813400434,3.07101298901519,4.50210088025344,5.34793867218835,4.41942878210502,4.9830088279686,13.6071595452469,0,0.302286240427142,0,1.72084775396277,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0.461230994512117,0.60289056221049,0.470354828542819,0.376999773989026,0,0.722996784599558,0,0,0,0,0,13.1751358655196,17.3840766655168,0.510914110417183,0,0,0,4.79330046095433,3.20250421973039,3.39266750704734,4.69325664519146,6.90431734791892,3.1168206683934,5.353961681236,0,0,0,0.631325567659422,1.43132487258974,3.21862946206862,3.96136685571768,4.06903008156431,4.89862793889561,3.45907044769094,2.52994656311268,1.81092359517311,0,0.567318240503458,0.703804496655795,0.43839146485515,0,0,0,0,0,0,0,2.69263504296152,2.81431271977315,0.900310307305074,0.946978942340841,0.393528463494808,0.617068451549513,0.930135779001631,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,1.26173969138476,10.2904612379284,0,0,0.426576501070468,1.62565670302307,0.644337306610467,0.403367049246685,0.667134131534611,0.190225626112559,0.949058123089023,0,1.50801125280162,0.994782360205754,0.779856348476481,0.898819408654221,0,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,1.11642284300551,0,0,0,0,3.51031061316549,2.65287976478679,0.814824882210129,0.678980343100753,0.234690248288502,1.17254380209271,0.952174563544055,0.390267295715598,16.3940549870439,24.1396511717165,32.2098632688124,6.22680595919804,9.49767400262426,6.36455857758651,0,0,0,0.275936746304732,2.40825884981688,3.04750385139728,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0,0,46.591590881162,0.709700426041343,0,0,0.329940245945071,1.32745138339963,1.21390318077491,0.604647113929502,0.565815239267694,0.590603785761546,1.53717573971964,1.03371317267288,1.81766864738753,0,0.632073515871632,0,1.03135543248187,12.5962654128902,2.70091641046965,0.388076051348264,0.643011105094777,0.354680467284547,1.42695054081656,1.97458824722545,0.608929898229199,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0.582961673259701,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,0.259229946583586,0.621339313086926,0.56369293868419,0.149516546043979,0,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0.966336483304024,1.72818003754719,0.316011120628178,0.405450430580328,0.410843828659309,0,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,5.0827665835536,4.60325236507177,4.58316410751517,2.749650917499,2.74033007908257,4.5323633843382,4.05013500139084,4.05289082901798,2.26571204492102,3.10656187051092,9.96358536808096,19.1531939232495,7.0000778359195,1.94485373654635,1.04806581313991,1.83843508450014,2.66696073361938,3.09052585858341,1.60459604795908,2.52697211763797,2.28131369901216,2.82939512079114,2.06011316433741,2.04880487695582,2.41228969613576,0.952587382566147,2.78122382267653,2.12200142510076,3.29668720642645,2.64958056241915,1.71434626192708,1.4198064492747,2.38436189947321,3.0522747492789,2.54095327121393,2.19997980518359,2.92684756596436,2.36762740294059,2.58027816307137,1.68342681497322,2.60997039873183,2.1670986122624,2.45538625901814,1.85924209423159,2.3148793317737,6.99469618226249,1.40358965067245,2.14871054048298,0.191288332068843,0.220591419119515,0.463735671240843
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,21.2432283902578,18.5146842745212,13.3104594736298,0.338844532069132,0,0,0,0,1.19840044207362,1.53687322128622,3.42175720617976,2.43010688997043,2.10324961351382,5.14171771926846,3.75476519617743,3.06226998037385,3.73797336971122,1.83843757322004,2.20231761998777,2.55374676170375,3.07213066512487,20.9699197491008,19.1209175129036,18.7528813400434,3.07101298901519,4.50210088025344,5.34793867218835,4.41942878210502,4.9830088279686,13.6071595452469,0,0.302286240427142,0,1.72084775396277,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0.461230994512117,0.60289056221049,0.470354828542819,0.376999773989026,0,0.722996784599558,0,0,0,0,0,13.1751358655196,17.3840766655168,0.510914110417183,0,0,0,4.79330046095433,3.20250421973039,3.39266750704734,4.69325664519146,6.90431734791892,3.1168206683934,5.353961681236,0,0,0,0.631325567659422,1.43132487258974,3.21862946206862,3.96136685571768,4.06903008156431,4.89862793889561,3.45907044769094,2.52994656311268,1.81092359517311,0,0.567318240503458,0.703804496655795,0.43839146485515,0,0,0,0,0,0,0,2.69263504296152,2.81431271977315,0.900310307305074,0.946978942340841,0.393528463494808,0.617068451549513,0.930135779001631,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,1.26173969138476,10.2904612379284,0,0,0.426576501070468,1.62565670302307,0.644337306610467,0.403367049246685,0.667134131534611,0.190225626112559,0.949058123089023,0,1.50801125280162,0.994782360205754,0.779856348476481,0.898819408654221,0,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,1.11642284300551,0,0,0,0,3.51031061316549,2.65287976478679,0.814824882210129,0.678980343100753,0.234690248288502,1.17254380209271,0.952174563544055,0.390267295715598,16.3940549870439,24.1396511717165,32.2098632688124,6.22680595919804,9.49767400262426,6.36455857758651,0,0,0,0.275936746304732,2.40825884981688,3.04750385139728,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0,0,46.591590881162,0.709700426041343,0,0,0.329940245945071,1.32745138339963,1.21390318077491,0.604647113929502,0.565815239267694,0.590603785761546,1.53717573971964,1.03371317267288,1.81766864738753,0,0.632073515871632,0,1.03135543248187,12.5962654128902,2.70091641046965,0.388076051348264,0.643011105094777,0.354680467284547,1.42695054081656,1.97458824722545,0.608929898229199,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0.582961673259701,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,0.259229946583586,0.621339313086926,0.56369293868419,0.149516546043979,0,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0.966336483304024,1.72818003754719,0.316011120628178,0.405450430580328,0.410843828659309,0,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,5.0827665835536,4.60325236507177,4.58316410751517,2.749650917499,2.74033007908257,4.5323633843382,4.05013500139084,4.05289082901798,2.26571204492102,3.10656187051092,9.96358536808096,19.1531939232495,7.0000778359195,1.94485373654635,1.04806581313991,1.83843508450014,2.66696073361938,3.09052585858341,1.60459604795908,2.52697211763797,2.28131369901216,2.82939512079114,2.06011316433741,2.04880487695582,2.41228969613576,0.952587382566147,2.78122382267653,2.12200142510076,3.29668720642645,2.64958056241915,1.71434626192708,1.4198064492747,2.38436189947321,3.0522747492789,2.54095327121393,2.19997980518359,2.92684756596436,2.36762740294059,2.58027816307137,1.68342681497322,2.60997039873183,2.1670986122624,2.45538625901814,1.85924209423159,2.3148793317737,6.99469618226249,1.40358965067245,2.14871054048298,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p3@Nav2
}}
}}

Latest revision as of 23:03, 26 September 2015

Short description:p3@Nav2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nav2_5end
Coexpression cluster:NA
Association with transcript: 16bp_to_NM_001111016, uc009hbd.2_5end
EntrezGene:Nav2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nav2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C321.24
Mouse Granule cells, donor2.CNhs12357.11731-123E318.51
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I217.38
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C64.90
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G110.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E516.39
lung, neonate N07.CNhs11111.715-19A324.14
lung, neonate N10.CNhs11219.750-23E632.21
lung, neonate N20.CNhs11109.822-18A46.23
lung, neonate N25.CNhs11119.1359-25C79.50
lung, neonate N30.CNhs11133.1394-42H26.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I946.59
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G812.60
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I89.96
whole body, embryo E12.CNhs10587.857-27C919.15
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.17e-1723
neuroblast (sensu Vertebrata)8.17e-1723
neuron4.97e-1033
neuronal stem cell4.97e-1033
neuroblast4.97e-1033
electrically signaling cell4.97e-1033
electrically responsive cell2.91e-0739
electrically active cell2.91e-0739
neural cell5.99e-0743

Uber anatomy
Ontology termp-valuen
neurectoderm2.13e-2464
neural plate2.13e-2464
presumptive neural plate2.13e-2464
regional part of nervous system1.13e-2354
neural tube1.54e-2252
neural rod1.54e-2252
future spinal cord1.54e-2252
neural keel1.54e-2252
central nervous system1.49e-2173
pre-chordal neural plate1.12e-2049
nervous system1.87e-2075
gray matter4.23e-2034
ecto-epithelium5.42e-2073
ectoderm-derived structure3.54e-1995
ectoderm3.54e-1995
presumptive ectoderm3.54e-1995
brain3.56e-1947
future brain3.56e-1947
regional part of brain3.14e-1846
anterior neural tube6.20e-1740
regional part of forebrain3.45e-1639
forebrain3.45e-1639
future forebrain3.45e-1639
brain grey matter3.80e-1629
regional part of telencephalon3.80e-1629
telencephalon3.80e-1629
structure with developmental contribution from neural crest1.10e-1392
cerebral cortex3.85e-1021
cerebral hemisphere3.85e-1021
pallium3.85e-1021
tube2.00e-09114
anatomical conduit3.42e-08122
regional part of cerebral cortex3.96e-0817
occipital lobe1.49e-0710
visual cortex1.49e-0710
neocortex1.49e-0710
basal ganglion1.52e-078
nuclear complex of neuraxis1.52e-078
aggregate regional part of brain1.52e-078
collection of basal ganglia1.52e-078
cerebral subcortex1.52e-078
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