Personal tools

FFCP PHASE1:Mm9::chrX:131745211..131745239,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chrX:131745211..131745239,- |short_description=p2@Tceal6 |description=CAGE_peak_2_at_Tceal6_5end |association_with_transcript=0bp_to_ENSMUST00000033783,NM_02535...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chrX:131745211..131745239,-
|DHSsupport=NA
|short_description=p2@Tceal6
|DPIdataset=NA
|description=CAGE_peak_2_at_Tceal6_5end
|association_with_transcript=0bp_to_ENSMUST00000033783,NM_025355,uc009uhc.2_5end
|EntrezGene=66104
|EntrezGene=66104
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9DB24,Q14C38
|UniProt=Q9DB24,Q14C38
|association_with_transcript=0bp_to_ENSMUST00000033783,NM_025355,uc009uhc.2_5end
|cluster_id=chrX:131745211..131745239,-
|description=CAGE_peak_2_at_Tceal6_5end
|id=chrX:131745211..131745239,-
|ontology_enrichment_celltype=CL:0000117!4.20e-13!23;CL:0000337!4.20e-13!23;CL:0000540!3.20e-12!33;CL:0000047!3.20e-12!33;CL:0000031!3.20e-12!33;CL:0000404!3.20e-12!33;CL:0000393!3.92e-08!39;CL:0000211!3.92e-08!39;CL:0000221!7.01e-08!44;CL:0000133!7.01e-08!44;CL:0002319!1.07e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,4.30e-17,23;CL:0000337,4.30e-17,23;CL:0000540,6.79e-12,33;CL:0000047,6.79e-12,33;CL:0000031,6.79e-12,33;CL:0000404,6.79e-12,33;CL:0000393,9.95e-09,39;CL:0000211,9.95e-09,39;CL:0000221,2.14e-07,44;CL:0000133,2.14e-07,44;CL:0002319,3.63e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!7.82e-25!71;UBERON:0003075!7.82e-25!71;UBERON:0007284!7.82e-25!71;UBERON:0001017!9.20e-25!73;UBERON:0005743!9.20e-25!73;UBERON:0000073!2.73e-24!75;UBERON:0001016!2.73e-24!75;UBERON:0001049!8.17e-24!52;UBERON:0005068!8.17e-24!52;UBERON:0006241!8.17e-24!52;UBERON:0007135!8.17e-24!52;UBERON:0000033!4.29e-23!63;UBERON:0000955!8.69e-23!50;UBERON:0006238!8.69e-23!50;UBERON:0004121!3.22e-22!102;UBERON:0000924!3.22e-22!102;UBERON:0006601!3.22e-22!102;UBERON:0002616!5.31e-22!49;UBERON:0003056!7.45e-21!49;UBERON:0003080!3.80e-19!40;UBERON:0002020!6.17e-19!34;UBERON:0002780!2.27e-18!39;UBERON:0001890!2.27e-18!39;UBERON:0006240!2.27e-18!39;UBERON:0002791!5.66e-16!29;UBERON:0003528!5.66e-16!29;UBERON:0001893!5.66e-16!29;UBERON:0000956!6.51e-11!21;UBERON:0001869!6.51e-11!21;UBERON:0000203!6.51e-11!21;UBERON:0000153!9.93e-11!94;UBERON:0007811!3.48e-10!86;UBERON:0002619!1.50e-09!17;UBERON:0002021!1.20e-07!10;UBERON:0000411!1.20e-07!10;UBERON:0001950!1.20e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.95e-30,54;UBERON:0002346,2.03e-28,64;UBERON:0003075,2.03e-28,64;UBERON:0007284,2.03e-28,64;UBERON:0001049,2.33e-28,52;UBERON:0005068,2.33e-28,52;UBERON:0006241,2.33e-28,52;UBERON:0007135,2.33e-28,52;UBERON:0001017,5.34e-27,73;UBERON:0001016,1.03e-25,75;UBERON:0000955,2.80e-24,47;UBERON:0006238,2.80e-24,47;UBERON:0002020,1.14e-23,34;UBERON:0010371,2.41e-23,73;UBERON:0002616,2.80e-23,46;UBERON:0004121,9.37e-23,95;UBERON:0000924,9.37e-23,95;UBERON:0006601,9.37e-23,95;UBERON:0003056,1.28e-22,49;UBERON:0003080,2.12e-21,40;UBERON:0002780,2.11e-20,39;UBERON:0001890,2.11e-20,39;UBERON:0006240,2.11e-20,39;UBERON:0003528,1.05e-19,29;UBERON:0002791,1.05e-19,29;UBERON:0001893,1.05e-19,29;UBERON:0010314,3.39e-15,92;UBERON:0000956,5.67e-13,21;UBERON:0001869,5.67e-13,21;UBERON:0000203,5.67e-13,21;UBERON:0002619,4.04e-11,17;UBERON:0002021,9.31e-10,10;UBERON:0000411,9.31e-10,10;UBERON:0001950,9.31e-10,10;UBERON:0002420,4.60e-08,8;UBERON:0007245,4.60e-08,8;UBERON:0010009,4.60e-08,8;UBERON:0010011,4.60e-08,8;UBERON:0000454,4.60e-08,8;UBERON:0003076,2.16e-07,12;UBERON:0003057,2.16e-07,12
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,12.1389876515759,15.340738398889,10.1413024560989,0,0,0,0,0,0,0,1.55534418462716,2.56511282830212,3.78584930432488,15.1395021734016,15.6816664075646,8.20688354740192,5.94241920313065,10.1114066527102,19.82085857989,25.4097802789524,29.4924543851987,10.8146755938759,15.4614117688072,11.4600941522487,22.8930059181132,26.449842671489,29.795658316478,19.7401152267357,20.9286370774681,18.0807462450542,0.151452386666368,0.226714680320357,0,0,0,0,0,0,1.12355536105401,0,0,0,1.54927761754349,0,0,0,0,0,0,1.02765491747154,0,1.33597925158342,0.173485326766136,0.913396434936424,0.230615497256059,0.753613202763113,0.587943535678524,0.376999773989026,0,1.44599356919912,0,0.808834249737046,0.220841518460394,0,0,23.7152445579353,15.9179497178226,0,0,0,0,43.2894947879938,52.1550687213234,31.539242380329,49.8875798951833,36.5673103982373,37.1940599761613,33.2594589288903,0.509196819251581,0.248813941220186,0,2.94618598241064,0.260240885925407,0.459804208866946,3.42118046630164,2.56198190320716,2.10913147369116,3.45907044769094,2.24884138943349,6.72628763921441,0,2.08016688184601,1.58356011747554,2.41115305670332,1.39023624612799,2.43776516565517,1.64625709126355,1.39323986772945,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0,0.196764231747404,0.462801338662135,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,59.3017654950839,19.2431625149262,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0,0.658795818896044,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.947457058852424,0.325929952884052,0.678980343100753,0.704070744865506,0,0,0,0.315270288212382,0.221464689648775,0,0,0.345369963731791,0.289298117163023,0,0,0,0,38.3715910070823,33.1709073055935,0,0,0.94652465824877,0,1.29254038639679,0.955875191810208,0.891194696329576,0.283076530788832,0.404810701674894,2.33804686329049,2.37172666767914,37.2732727049296,1.13552068166615,0.534196811001766,0,0,0,0.485561272309963,0,0,0.590603785761546,0,0,0,0,0,0,0,7.14923172082955,0.900305470156551,0.517434735131018,0.643011105094777,1.06404140185364,1.42695054081656,2.13913726782757,3.34911444026059,0,0,0.220528398054962,0,0.645857706783622,0.301564624640779,0,0.164140899745061,0,36.7142097980809,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.813277868507395,0.216010681643603,0.209088296014469,0.436725127492355,0.809186078308924,0.909188012978695,0.26175594198403,0.388844919875379,0,0,1.64468200648377,0.992750942742586,1.16670713006429,0.774958940866387,0.337912250981556,0.704143431874524,0.2604087696879,3.25063967719704,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0,0.501572104035363,22.5900737046827,23.9369122983732,25.7802981047728,21.997207339992,22.6077231524312,22.661816921691,18.2256075062588,26.568950990229,29.4542565839733,23.8169743405837,1.55681021376265,3.19219898720825,3.58540572083682,4.86213434136588,5.65955539095552,5.33146174505041,2.889207461421,4.12070114477788,6.4183841918363,4.29585259998456,4.30914809813408,3.9611531691076,4.30750934361459,4.60981097315059,4.53740204749345,7.1444053692461,3.70829843023538,2.31491064556446,3.29668720642645,3.82717192349433,6.85738504770831,3.90446773550542,5.48403236878838,4.0696996657052,3.76437521661322,4.99226186560891,5.12198324043763,4.47218509444333,5.29636043998861,3.36685362994643,3.08451047122853,4.43270170690036,4.50154147486658,3.71848418846318,3.08650577569826,5.74564329257276,3.50897412668113,3.65280791882107,2.48674831689496,1.32354851471709,0.927471342481686
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,12.1389876515759,15.340738398889,10.1413024560989,0,0,0,0,0,0,0,1.55534418462716,2.56511282830212,3.78584930432488,15.1395021734016,15.6816664075646,8.20688354740192,5.94241920313065,10.1114066527102,19.82085857989,25.4097802789524,29.4924543851987,10.8146755938759,15.4614117688072,11.4600941522487,22.8930059181132,26.449842671489,29.795658316478,19.7401152267357,20.9286370774681,18.0807462450542,0.151452386666368,0.226714680320357,0,0,0,0,0,0,1.12355536105401,0,0,0,1.54927761754349,0,0,0,0,0,0,1.02765491747154,0,1.33597925158342,0.173485326766136,0.913396434936424,0.230615497256059,0.753613202763113,0.587943535678524,0.376999773989026,0,1.44599356919912,0,0.808834249737046,0.220841518460394,0,0,23.7152445579353,15.9179497178226,0,0,0,0,43.2894947879938,52.1550687213234,31.539242380329,49.8875798951833,36.5673103982373,37.1940599761613,33.2594589288903,0.509196819251581,0.248813941220186,0,2.94618598241064,0.260240885925407,0.459804208866946,3.42118046630164,2.56198190320716,2.10913147369116,3.45907044769094,2.24884138943349,6.72628763921441,0,2.08016688184601,1.58356011747554,2.41115305670332,1.39023624612799,2.43776516565517,1.64625709126355,1.39323986772945,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0,0.196764231747404,0.462801338662135,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,59.3017654950839,19.2431625149262,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0,0.658795818896044,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.947457058852424,0.325929952884052,0.678980343100753,0.704070744865506,0,0,0,0.315270288212382,0.221464689648775,0,0,0.345369963731791,0.289298117163023,0,0,0,0,38.3715910070823,33.1709073055935,0,0,0.94652465824877,0,1.29254038639679,0.955875191810208,0.891194696329576,0.283076530788832,0.404810701674894,2.33804686329049,2.37172666767914,37.2732727049296,1.13552068166615,0.534196811001766,0,0,0,0.485561272309963,0,0,0.590603785761546,0,0,0,0,0,0,0,7.14923172082955,0.900305470156551,0.517434735131018,0.643011105094777,1.06404140185364,1.42695054081656,2.13913726782757,3.34911444026059,0,0,0.220528398054962,0,0.645857706783622,0.301564624640779,0,0.164140899745061,0,36.7142097980809,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.813277868507395,0.216010681643603,0.209088296014469,0.436725127492355,0.809186078308924,0.909188012978695,0.26175594198403,0.388844919875379,0,0,1.64468200648377,0.992750942742586,1.16670713006429,0.774958940866387,0.337912250981556,0.704143431874524,0.2604087696879,3.25063967719704,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0,0.501572104035363,22.5900737046827,23.9369122983732,25.7802981047728,21.997207339992,22.6077231524312,22.661816921691,18.2256075062588,26.568950990229,29.4542565839733,23.8169743405837,1.55681021376265,3.19219898720825,3.58540572083682,4.86213434136588,5.65955539095552,5.33146174505041,2.889207461421,4.12070114477788,6.4183841918363,4.29585259998456,4.30914809813408,3.9611531691076,4.30750934361459,4.60981097315059,4.53740204749345,7.1444053692461,3.70829843023538,2.31491064556446,3.29668720642645,3.82717192349433,6.85738504770831,3.90446773550542,5.48403236878838,4.0696996657052,3.76437521661322,4.99226186560891,5.12198324043763,4.47218509444333,5.29636043998861,3.36685362994643,3.08451047122853,4.43270170690036,4.50154147486658,3.71848418846318,3.08650577569826,5.74564329257276,3.50897412668113,3.65280791882107,2.48674831689496,1.32354851471709,0.927471342481686
|short_description=p2@Tceal6
}}
}}

Latest revision as of 14:25, 1 October 2015

Short description:p2@Tceal6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tceal6_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000033783, NM_025355, uc009uhc.2_5end
EntrezGene:Tceal6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tceal6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.21
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.49
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.80
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B223.72
cerebellum, neonate N30.CNhs11135.1395-42I215.92
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A443.29
corpus striatum, adult.CNhs10487.19-21D852.16
corpus striatum, neonate N00.CNhs11226.630-43F131.54
cortex, adult.CNhs10473.12-14D549.89
cortex, neonate N30.CNhs11107.1392-42F236.57
diencephalon, adult.CNhs10482.20-12F237.19
diencephalon, neonate N30.CNhs11201.1388-42B233.26
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E859.30
hippocampus, neonate N00.CNhs11228.627-43G119.24
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C238.37
medulla oblongata, neonate N30.CNhs11200.1396-42A333.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I937.27
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C936.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.78
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A726.57
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.82
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.30e-1723
neuroblast (sensu Vertebrata)4.30e-1723
neuron6.79e-1233
neuronal stem cell6.79e-1233
neuroblast6.79e-1233
electrically signaling cell6.79e-1233
electrically responsive cell9.95e-0939
electrically active cell9.95e-0939
ectodermal cell2.14e-0744
neurectodermal cell2.14e-0744
neural cell3.63e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.95e-3054
neurectoderm2.03e-2864
neural plate2.03e-2864
presumptive neural plate2.03e-2864
neural tube2.33e-2852
neural rod2.33e-2852
future spinal cord2.33e-2852
neural keel2.33e-2852
central nervous system5.34e-2773
nervous system1.03e-2575
brain2.80e-2447
future brain2.80e-2447
gray matter1.14e-2334
ecto-epithelium2.41e-2373
regional part of brain2.80e-2346
ectoderm-derived structure9.37e-2395
ectoderm9.37e-2395
presumptive ectoderm9.37e-2395
pre-chordal neural plate1.28e-2249
anterior neural tube2.12e-2140
regional part of forebrain2.11e-2039
forebrain2.11e-2039
future forebrain2.11e-2039
brain grey matter1.05e-1929
regional part of telencephalon1.05e-1929
telencephalon1.05e-1929
structure with developmental contribution from neural crest3.39e-1592
cerebral cortex5.67e-1321
cerebral hemisphere5.67e-1321
pallium5.67e-1321
regional part of cerebral cortex4.04e-1117
occipital lobe9.31e-1010
visual cortex9.31e-1010
neocortex9.31e-1010
basal ganglion4.60e-088
nuclear complex of neuraxis4.60e-088
aggregate regional part of brain4.60e-088
collection of basal ganglia4.60e-088
cerebral subcortex4.60e-088
posterior neural tube2.16e-0712
chordal neural plate2.16e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:131745211..131745239,-&oldid=4307210"