FFCP PHASE1:Hg19::chr14:21493213..21493236,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:21493213..21493236,- to FFCP PHASE1:Hg19::chr14:21493213..21493236,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57447 | |EntrezGene=57447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14460 | |HGNC=14460 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UN36,G3V3X3,G3V3N4,G3V4S9,G3V4T9,G3V2A6,G3V237 | |UniProt=Q9UN36,G3V3X3,G3V3N4,G3V4S9,G3V4T9,G3V2A6,G3V237 | ||
|association_with_transcript=0bp_to_ENST00000397855,ENST00000397856,ENST00000553900,ENST00000554483,ENST00000554770,ENST00000556008,ENST00000556688,ENST00000557182,ENST00000557198,ENST00000557318,ENST00000557353_5end | |||
|cluster_id=chr14:21493213..21493236,- | |||
|coexpression_cluster_id=C3404 | |||
|description=CAGE_peak_2_at_NDRG2_5end | |||
|id=chr14:21493213..21493236,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.51e-53!115;UBERON:0001049!7.90e-29!57;UBERON:0005068!7.90e-29!57;UBERON:0006241!7.90e-29!57;UBERON:0007135!7.90e-29!57;UBERON:0001017!1.89e-28!82;UBERON:0005743!5.34e-28!86;UBERON:0000955!1.39e-25!69;UBERON:0006238!1.39e-25!69;UBERON:0000073!4.97e-25!94;UBERON:0001016!4.97e-25!94;UBERON:0002616!5.49e-25!59;UBERON:0003080!4.10e-22!42;UBERON:0003075!7.13e-22!86;UBERON:0007284!7.13e-22!86;UBERON:0002346!1.15e-21!90;UBERON:0002780!1.33e-21!41;UBERON:0001890!1.33e-21!41;UBERON:0006240!1.33e-21!41;UBERON:0002020!1.57e-18!34;UBERON:0003528!1.57e-18!34;UBERON:0001893!2.16e-18!34;UBERON:0002791!7.71e-18!33;UBERON:0001869!3.05e-17!32;UBERON:0000153!4.40e-17!129;UBERON:0007811!4.40e-17!129;UBERON:0000033!1.74e-16!123;UBERON:0000924!8.85e-16!173;UBERON:0006601!8.85e-16!173;UBERON:0004121!1.19e-15!169;UBERON:0003056!3.08e-15!61;UBERON:0002619!1.81e-14!22;UBERON:0001950!3.92e-13!20;UBERON:0000956!5.76e-13!25;UBERON:0000203!5.76e-13!25;UBERON:0000062!2.33e-09!511;UBERON:0003076!7.37e-08!15;UBERON:0003057!7.37e-08!15;UBERON:0000064!3.25e-07!219;UBERON:0002308!3.82e-07!9;UBERON:0000125!3.82e-07!9;UBERON:0002420!4.06e-07!9;UBERON:0007245!4.06e-07!9;UBERON:0010009!4.06e-07!9;UBERON:0010011!4.06e-07!9;UBERON:0000454!4.06e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.90e-16;41!UBERON:0001890;1.90e-16;41!UBERON:0003528;2.37e-16;34!UBERON:0002020;2.37e-16;34!UBERON:0001893;2.51e-16;34!UBERON:0001869;4.47e-16;32!UBERON:0002791;4.56e-16;32!UBERON:0000073;6.00e-16;53!UBERON:0002616;6.00e-16;53!UBERON:0002619;3.74e-15;22!UBERON:0007023;1.19e-14;114!UBERON:0001950;9.55e-14;20!UBERON:0000956;2.38e-13;25!UBERON:0000203;2.38e-13;25!UBERON:0001017;3.24e-12;75!UBERON:0000955;4.64e-12;68!UBERON:0001016;1.16e-10;83!UBERON:0000125;1.92e-07;9!UBERON:0002308;1.92e-07;9!UBERON:0002420;2.05e-07;9!UBERON:0007245;2.05e-07;9!UBERON:0010009;2.05e-07;9!UBERON:0010011;2.05e-07;9!UBERON:0000454;2.05e-07;9!UBERON:0004732;5.03e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.91e-55,114;UBERON:0001049,1.80e-29,56;UBERON:0005068,1.80e-29,56;UBERON:0006241,1.80e-29,56;UBERON:0007135,1.80e-29,56;UBERON:0001017,1.11e-28,81;UBERON:0000073,1.83e-27,53;UBERON:0002616,1.83e-27,53;UBERON:0001016,1.04e-25,89;UBERON:0000955,1.16e-25,68;UBERON:0006238,1.16e-25,68;UBERON:0011216,3.31e-25,223;UBERON:0002780,2.00e-22,41;UBERON:0001890,2.00e-22,41;UBERON:0003080,2.00e-22,41;UBERON:0006240,2.00e-22,41;UBERON:0003075,4.58e-22,82;UBERON:0007284,4.58e-22,82;UBERON:0002346,1.03e-21,86;UBERON:0003528,3.40e-19,34;UBERON:0002020,3.40e-19,34;UBERON:0001893,4.75e-19,34;UBERON:0001869,7.67e-18,32;UBERON:0002791,7.91e-18,32;UBERON:0010371,4.90e-16,104;UBERON:0004121,8.00e-16,171;UBERON:0000924,8.00e-16,171;UBERON:0006601,8.00e-16,171;UBERON:0003056,1.52e-15,61;UBERON:0002619,3.97e-15,22;UBERON:0001950,1.01e-13,20;UBERON:0000956,2.35e-13,25;UBERON:0000203,2.35e-13,25;UBERON:0010314,8.48e-13,132;UBERON:0003076,3.51e-08,15;UBERON:0003057,3.51e-08,15;UBERON:0000125,1.98e-07,9;UBERON:0002308,1.98e-07,9;UBERON:0002420,2.10e-07,9;UBERON:0007245,2.10e-07,9;UBERON:0010009,2.10e-07,9;UBERON:0010011,2.10e-07,9;UBERON:0000454,2.10e-07,9;UBERON:0000025,2.97e-07,192;UBERON:0004732,6.41e-07,13 | |||
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| ||
|short_description=p2@NDRG2 | |||
}} | }} |
Latest revision as of 01:29, 19 September 2015
Short description: | p2@NDRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDRG2_5end |
Coexpression cluster: | C3404_parotid_globus_locus_salivary_hippocampus_brain_medulla |
Association with transcript: | 0bp_to_ENST00000397855, ENST00000397856, ENST00000553900, ENST00000554483, ENST00000554770, ENST00000556008, ENST00000556688, ENST00000557182, ENST00000557198, ENST00000557318, ENST00000557353_5end |
EntrezGene: | NDRG2 |
HGNC: | 14460 |
UniProt: | Q9UN36G3V3X3G3V3N4G3V4S9G3V4T9G3V2A6G3V237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data