FFCP PHASE1:Hg19::chr14:94640671..94640694,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:94640671..94640694,+ to FFCP PHASE1:Hg19::chr14:94640671..94640694,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57718 | |EntrezGene=57718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23788 | |HGNC=23788 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000328839_5end | |||
|cluster_id=chr14:94640671..94640694,+ | |||
|coexpression_cluster_id=C3464 | |||
|description=CAGE_peak_2_at_PPP4R4_5end | |||
|id=chr14:94640671..94640694,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.17e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.70e-08,42;CL:0000223,3.32e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.45e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.11e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.91e-19!57;UBERON:0005068!7.91e-19!57;UBERON:0006241!7.91e-19!57;UBERON:0007135!7.91e-19!57;UBERON:0000033!4.98e-16!123;UBERON:0000153!1.02e-15!129;UBERON:0007811!1.02e-15!129;UBERON:0005743!1.71e-15!86;UBERON:0002616!3.50e-15!59;UBERON:0001017!6.27e-15!82;UBERON:0003075!9.36e-15!86;UBERON:0007284!9.36e-15!86;UBERON:0003080!2.19e-14!42;UBERON:0000955!2.92e-14!69;UBERON:0006238!2.92e-14!69;UBERON:0002780!4.75e-14!41;UBERON:0001890!4.75e-14!41;UBERON:0006240!4.75e-14!41;UBERON:0002346!2.06e-13!90;UBERON:0000073!3.73e-12!94;UBERON:0001016!3.73e-12!94;UBERON:0007023!5.29e-12!115;UBERON:0004121!1.08e-11!169;UBERON:0000924!5.90e-11!173;UBERON:0006601!5.90e-11!173;UBERON:0003056!7.04e-11!61;UBERON:0002020!1.09e-10!34;UBERON:0003528!1.09e-10!34;UBERON:0001893!2.06e-10!34;UBERON:0002791!5.65e-10!33;UBERON:0001869!7.21e-10!32;UBERON:0000062!1.17e-09!511;UBERON:0000475!2.64e-09!365;UBERON:0002619!5.20e-09!22;UBERON:0001950!7.34e-08!20;UBERON:0000956!9.19e-07!25;UBERON:0000203!9.19e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.37e-13;41!UBERON:0001890;3.37e-13;41!UBERON:0000073;1.58e-12;53!UBERON:0002616;1.58e-12;53!UBERON:0003528;8.36e-12;34!UBERON:0002020;8.36e-12;34!UBERON:0001893;1.28e-11;34!UBERON:0001869;1.64e-11;32!UBERON:0002791;1.81e-11;32!UBERON:0002619;1.29e-10;22!UBERON:0000955;2.73e-09;68!UBERON:0001950;3.81e-09;20!UBERON:0000956;1.43e-08;25!UBERON:0000203;1.43e-08;25!UBERON:0001017;4.46e-08;75!UBERON:0002420;1.17e-07;9!UBERON:0007245;1.17e-07;9!UBERON:0010009;1.17e-07;9!UBERON:0010011;1.17e-07;9!UBERON:0000454;1.17e-07;9!UBERON:0000125;3.16e-07;9!UBERON:0002308;3.16e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.18e-23,56;UBERON:0005068,1.18e-23,56;UBERON:0006241,1.18e-23,56;UBERON:0007135,1.18e-23,56;UBERON:0000073,8.97e-22,53;UBERON:0002616,8.97e-22,53;UBERON:0001017,1.11e-18,81;UBERON:0002780,3.21e-18,41;UBERON:0001890,3.21e-18,41;UBERON:0003080,3.21e-18,41;UBERON:0006240,3.21e-18,41;UBERON:0000955,3.68e-18,68;UBERON:0006238,3.68e-18,68;UBERON:0010371,4.97e-18,104;UBERON:0003075,1.79e-16,82;UBERON:0007284,1.79e-16,82;UBERON:0001016,1.95e-15,89;UBERON:0002346,8.28e-15,86;UBERON:0003528,9.10e-14,34;UBERON:0002020,9.10e-14,34;UBERON:0001893,2.12e-13,34;UBERON:0007023,6.25e-13,114;UBERON:0003056,1.01e-12,61;UBERON:0004121,1.03e-12,171;UBERON:0000924,1.03e-12,171;UBERON:0006601,1.03e-12,171;UBERON:0001869,1.11e-12,32;UBERON:0002791,1.58e-12,32;UBERON:0002619,1.28e-10,22;UBERON:0010314,6.96e-10,132;UBERON:0001950,3.89e-09,20;UBERON:0011216,1.04e-08,223;UBERON:0000956,1.42e-08,25;UBERON:0000203,1.42e-08,25;UBERON:0004111,3.19e-08,240;UBERON:0002420,1.31e-07,9;UBERON:0007245,1.31e-07,9;UBERON:0010009,1.31e-07,9;UBERON:0010011,1.31e-07,9;UBERON:0000454,1.31e-07,9;UBERON:0000025,2.86e-07,192;UBERON:0000125,3.60e-07,9;UBERON:0002308,3.60e-07,9;UBERON:0001894,9.93e-07,7;UBERON:0006222,9.93e-07,7 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,5.00366491765652,0.893922188854576,6.97870819280295,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0.309632246632152,8.27479102031034,6.92773613189975,12.201882335504,0.0774672005803016,0.995184627411951,0.293600439334847,11.0799081706375,9.22504458362652,3.68918480216948,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0.822335776043652,0.309706370895104,0,0,0.47296445977717,3.10271112662957,1.93645405075148,0,0.376484679085209,0,0.674170453335254,1.53041946185451,1.92557416245656,1.27867425159808,0,0,0,5.80418477257168,3.97169657283798,6.85104473895132,0,0,0.217188844705117,4.23779651843358,4.41933163185078,3.48108626184973,0,0.425208599930087,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,3.36305137788922,0,0.196709770113833,0.786021525498329,0.822405995998037,0.167186495390678,0,0.946895611469467,1.94826728407911,0,0,0,0.270803863765016,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0.511450247374121,0,1.00267582127178,0.869079113764942,3.1811437882044,3.40644409211845,0.189069634328136,1.10864698731282,0.263504357079378,3.40545596294053,2.5500670180478,1.85392221392215,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,1.74437620857014,0,1.13967460498122,32.3078401184254,2.58152958673932,0.354668382198357,1.12135520028461,0,0.74000264525148,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0,0.117434498643765,0,0,3.0623125688234,0,2.47981874821837,4.75201142912821,1.48360157567134,0,0,0,0.250237039743928,1.38532057742091,0.438977620880838,0.919463387397059,2.10333282469236,0,0.89694817844431,1.2813443329114,0.211931901159562,0,0,2.06112432036503,0.744467425326359,0,0.292311015483596,0,0,1.2931684545505,0,0,0.508681776931463,8.31021668602176,11.4553370648151,6.59650569394709,2.80539524098069,3.71083351300159,1.97529702878181,2.17688215532278,2.52320850875628,5.47466038613745,3.12899064659632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,2.36315962672562,0,0.983907508344908,0.343135620597051,5.26801369961403,5.62008766288098,4.2222168412885,1.29623823221941,0,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,8.43604505880993,3.19166043577833,6.09632918142262,4.38836761243957,8.13775027839093,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.1466765716419,2.06834745212444,0,0,0,0,0,0,0,1.14382394926518,0,0,0,0,0,7.23454504943007,3.48613383440118,9.49743416229542,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,7.50970464756633,1.57624608161542,0,0.385029108839245,0.254094624222463,0,0,0.167516265334349,0,0,2.99161459204025,0.828831026872071,0.49076596687656,0.500170521059677,0.542530047399471,0.207970861530807,0,0,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.368738337083406,1.91143951829782,0,0.343143423810856,0,1.07857100409308,0.213455115606889,0,0,0,0.744323423456331,2.30192959932094,0.280660094433074,0.128139149255701,9.72243773226737,2.0911009748669,4.45254199334973,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.604297247958111,3.80962293576241,5.61694032508968,0.68888668898764,0,1.18011973463482,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,1.02580050046556,0.656029291399411,1.30151357865721,2.36994326789761,1.73981983154852,2.97034199714117,4.59412430396938,1.95018073810956,0,0.870036464629098,0,0,0,0,0,0.170453254832202,0.0890320356467374,11.2393742445465,9.03293316615999,32.7964671111081,12.2400914835215,3.253918845081,7.870308670766,0,3.69640296211307,0,0,0.55597265731176,5.43874569619567,0,0.316379424718726,1.90630193923825,0,0.42793898803392,0.95460974377781,3.92474320099615,0.179872457583315,0.823611089208164,0.471249609382746,1.01091240786658,0,0.421258456238981,0,0.731140468893853,0,0,1.41405431953713,1.13008116620243,3.85955740482287,1.32687795048244,4.82295973779139,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,1.06428319221179,1.05553817648832,2.63435914367922,0,0,7.2166584544134,3.35151137767894,10.8890984861323,2.44773882019626,1.29151611801369,0,2.21715076768338,4.59446800413919,0,0,0,0,0,0.648473311192717,0,0,2.35012956480441,3.84991942105343,2.45040215981032,0.185803175125719,0.432807638929335,0.497992903438899,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,1.37402137902306,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0,0,0.36408156524854,0.780103689942349,0.852408440419239,1.19372242368845,0,0,24.8536911941574,9.98752856514641,19.2564059689627,0,1.90012867315194,1.39473591775749,0.276283915531148,2.01546198283421,0,0.861593638227486,2.48831670129446,0.449341755736634,0,0,0.394573622547734,0,0,7.75466196876175,3.33965153382665,0,0,0,3.6249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| ||
|short_description=p2@PPP4R4 | |||
}} | }} |
Latest revision as of 17:18, 16 September 2015
Short description: | p2@PPP4R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPP4R4_5end |
Coexpression cluster: | C3464_Small_granulosa_Fibroblast_squamous_amygdala_thalamus_epidermoid |
Association with transcript: | 0bp_to_ENST00000328839_5end |
EntrezGene: | PPP4R4 |
HGNC: | 23788 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.70e-08 | 42 |
endodermal cell | 3.32e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.11e-07 | 14 |