FFCP PHASE1:Hg19::chr15:75311837..75311851,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:75311837..75311851,+ to FFCP PHASE1:Hg19::chr15:75311837..75311851,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=192683 | |EntrezGene=192683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30386 | |HGNC=30386 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_AL360203_5end | |||
|cluster_id=chr15:75311837..75311851,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_4_at_SCAMP5_5end | |||
|id=chr15:75311837..75311851,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.47e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.43e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.15e-12;82!UBERON:0006215;3.42e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.07e-45!82;UBERON:0001049!1.87e-44!57;UBERON:0005068!1.87e-44!57;UBERON:0006241!1.87e-44!57;UBERON:0007135!1.87e-44!57;UBERON:0005743!1.71e-43!86;UBERON:0000073!2.02e-41!94;UBERON:0001016!2.02e-41!94;UBERON:0000955!2.32e-37!69;UBERON:0006238!2.32e-37!69;UBERON:0002616!2.59e-36!59;UBERON:0002780!1.12e-34!41;UBERON:0001890!1.12e-34!41;UBERON:0006240!1.12e-34!41;UBERON:0003075!1.20e-34!86;UBERON:0007284!1.20e-34!86;UBERON:0003080!1.59e-33!42;UBERON:0002346!1.71e-33!90;UBERON:0002020!9.08e-31!34;UBERON:0003528!9.08e-31!34;UBERON:0001893!2.98e-30!34;UBERON:0002791!3.83e-29!33;UBERON:0001869!1.14e-28!32;UBERON:0002619!3.97e-25!22;UBERON:0003056!3.92e-24!61;UBERON:0001950!5.67e-23!20;UBERON:0004121!2.16e-21!169;UBERON:0000956!3.25e-21!25;UBERON:0000203!3.25e-21!25;UBERON:0000924!3.94e-21!173;UBERON:0006601!3.94e-21!173;UBERON:0007023!1.71e-20!115;UBERON:0000033!1.87e-19!123;UBERON:0000153!1.18e-17!129;UBERON:0007811!1.18e-17!129;UBERON:0003076!9.17e-12!15;UBERON:0003057!9.17e-12!15;UBERON:0002420!3.76e-11!9;UBERON:0007245!3.76e-11!9;UBERON:0010009!3.76e-11!9;UBERON:0010011!3.76e-11!9;UBERON:0000454!3.76e-11!9;UBERON:0002308!4.14e-11!9;UBERON:0000125!4.14e-11!9;UBERON:0000025!2.32e-10!194;UBERON:0004111!7.01e-09!241;UBERON:0004733!7.17e-09!12;UBERON:0002028!7.17e-09!12;UBERON:0007277!7.17e-09!12;UBERON:0009663!7.68e-09!7;UBERON:0000200!8.43e-09!6;UBERON:0001871!2.54e-08!7;UBERON:0004732!5.66e-08!13;UBERON:0001872!1.54e-07!5;UBERON:0002298!3.42e-07!8;UBERON:0000349!3.60e-07!5;UBERON:0002021!4.96e-07!5;UBERON:0000477!7.50e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.45e-63;34!UBERON:0002020;2.45e-63;34!UBERON:0001869;3.81e-60;32!UBERON:0001893;3.03e-58;34!UBERON:0002619;1.41e-55;22!UBERON:0002791;3.61e-55;32!UBERON:0001950;2.28e-53;20!UBERON:0000956;9.19e-49;25!UBERON:0000203;9.19e-49;25!UBERON:0002780;4.67e-35;41!UBERON:0001890;4.67e-35;41!UBERON:0000073;1.38e-31;53!UBERON:0002616;1.38e-31;53!UBERON:0001872;5.15e-26;5!UBERON:0000955;6.26e-25;68!UBERON:0000200;1.25e-22;6!UBERON:0001017;2.17e-21;75!UBERON:0002420;2.28e-20;9!UBERON:0000125;2.28e-20;9!UBERON:0007245;2.28e-20;9!UBERON:0002308;2.28e-20;9!UBERON:0010009;2.28e-20;9!UBERON:0010011;2.28e-20;9!UBERON:0000454;2.28e-20;9!UBERON:0001016;1.45e-19;83!UBERON:0000349;3.55e-17;5!UBERON:0001870;4.92e-17;3!UBERON:0000988;4.26e-16;3!UBERON:0002680;1.77e-14;9!UBERON:0001895;1.77e-14;9!UBERON:0000369;1.72e-12;4!UBERON:0002435;1.72e-12;4!UBERON:0000204;1.72e-12;4!UBERON:0001871;2.40e-12;6!UBERON:0002702;2.92e-12;2!UBERON:0009663;3.23e-12;7!UBERON:0001876;2.61e-11;2!UBERON:0002148;2.61e-11;2!UBERON:0006331;2.61e-11;2!UBERON:0009662;2.61e-11;2!UBERON:0004733;8.37e-11;12!UBERON:0002028;8.37e-11;12!UBERON:0002021;4.32e-10;5!UBERON:0007023;4.68e-10;114!UBERON:0004732;5.92e-10;13!UBERON:0002298;2.67e-08;6!UBERON:0005383;4.47e-08;3!UBERON:0005382;4.47e-08;3!UBERON:0011216;1.94e-07;132!UBERON:0001874;7.17e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.63e-68,34;UBERON:0002020,6.63e-68,34;UBERON:0001869,1.15e-65,32;UBERON:0000073,2.17e-65,53;UBERON:0002616,2.17e-65,53;UBERON:0001049,1.19e-61,56;UBERON:0005068,1.19e-61,56;UBERON:0006241,1.19e-61,56;UBERON:0007135,1.19e-61,56;UBERON:0001893,1.20e-61,34;UBERON:0002791,1.49e-59,32;UBERON:0000955,1.37e-57,68;UBERON:0006238,1.37e-57,68;UBERON:0002780,6.26e-56,41;UBERON:0001890,6.26e-56,41;UBERON:0003080,6.26e-56,41;UBERON:0006240,6.26e-56,41;UBERON:0002619,1.33e-55,22;UBERON:0001950,2.11e-53,20;UBERON:0001017,2.52e-51,81;UBERON:0000956,8.74e-49,25;UBERON:0000203,8.74e-49,25;UBERON:0001016,1.04e-45,89;UBERON:0003075,1.48e-40,82;UBERON:0007284,1.48e-40,82;UBERON:0002346,1.98e-38,86;UBERON:0003056,2.52e-36,61;UBERON:0010371,2.57e-36,104;UBERON:0007023,6.62e-28,114;UBERON:0001872,2.47e-26,5;UBERON:0010314,3.61e-25,132;UBERON:0004121,6.62e-25,171;UBERON:0000924,6.62e-25,171;UBERON:0006601,6.62e-25,171;UBERON:0000200,1.41e-22,6;UBERON:0002420,2.87e-20,9;UBERON:0007245,2.87e-20,9;UBERON:0010009,2.87e-20,9;UBERON:0010011,2.87e-20,9;UBERON:0000454,2.87e-20,9;UBERON:0000125,3.78e-20,9;UBERON:0002308,3.78e-20,9;UBERON:0011216,1.54e-17,223;UBERON:0000349,4.40e-17,5;UBERON:0001870,6.14e-17,3;UBERON:0000988,6.02e-16,3;UBERON:0002680,1.97e-14,9;UBERON:0001895,1.97e-14,9;UBERON:0010092,1.97e-14,9;UBERON:0000025,3.62e-14,192;UBERON:0000369,1.94e-12,4;UBERON:0002435,1.94e-12,4;UBERON:0000204,1.94e-12,4;UBERON:0010082,1.94e-12,4;UBERON:0001871,2.23e-12,6;UBERON:0002702,2.70e-12,2;UBERON:0009663,4.41e-12,7;UBERON:0001876,2.11e-11,2;UBERON:0002148,3.23e-11,2;UBERON:0006331,3.23e-11,2;UBERON:0009662,3.23e-11,2;UBERON:0004733,9.04e-11,12;UBERON:0002028,9.04e-11,12;UBERON:0007277,9.04e-11,12;UBERON:0004111,3.29e-10,240;UBERON:0002021,5.92e-10,5;UBERON:0004732,6.35e-10,13;UBERON:0003076,1.44e-08,15;UBERON:0003057,1.44e-08,15;UBERON:0000483,1.94e-08,306;UBERON:0000119,2.67e-08,309;UBERON:0002298,3.15e-08,6;UBERON:0005383,3.68e-08,3;UBERON:0005382,3.68e-08,3;UBERON:0001874,8.49e-07,1 | |||
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| ||
|short_description=p4@SCAMP5 | |||
}} | }} |
Latest revision as of 02:50, 19 September 2015
Short description: | p4@SCAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCAMP5_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -1bp_to_AL360203_5end |
EntrezGene: | SCAMP5 |
HGNC: | 30386 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.43e-08 | 3 |