FFCP PHASE1:Hg19::chr1:208084387..208084511,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:208084387..208084511,- to FFCP PHASE1:Hg19::chr1:208084387..208084511,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=947 | |EntrezGene=947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1662 | |HGNC=1662 | ||
|TSSclassifier=strong | |||
|UniProt=B4DG27 | |UniProt=B4DG27 | ||
|association_with_transcript=0bp_to_ENST00000537704_5end | |||
|cluster_id=chr1:208084387..208084511,- | |||
|coexpression_cluster_id=C1470 | |||
|description=CAGE_peak_1_at_CD34_5end | |||
|id=chr1:208084387..208084511,- | |||
|ontology_enrichment_celltype=CL:0002139!1.43e-13!24;CL:0000115!2.55e-13!35;CL:0002078!1.99e-11!44;CL:0000071!9.09e-10!18;CL:0002546!9.09e-10!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.36e-16;24!CL:0000115;3.00e-13;36!CL:0000071;1.46e-11;18!CL:0002078;4.75e-09;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.41e-16,24;CL:0000115,1.79e-15,36;CL:0002078,9.21e-13,45;CL:0000071,1.47e-11,18;CL:0002546,1.47e-11,18;CL:0000213,1.56e-07,58;CL:0000215,1.56e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.46e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.97e-45!115;UBERON:0004111!1.38e-25!241;UBERON:0000025!6.00e-25!194;UBERON:0000477!3.27e-22!286;UBERON:0001049!1.74e-21!57;UBERON:0005068!1.74e-21!57;UBERON:0006241!1.74e-21!57;UBERON:0007135!1.74e-21!57;UBERON:0005743!3.10e-18!86;UBERON:0001017!3.40e-18!82;UBERON:0002616!2.42e-17!59;UBERON:0003075!3.00e-17!86;UBERON:0007284!3.00e-17!86;UBERON:0003080!6.85e-17!42;UBERON:0000073!2.13e-16!94;UBERON:0001016!2.13e-16!94;UBERON:0002780!3.06e-16!41;UBERON:0001890!3.06e-16!41;UBERON:0006240!3.06e-16!41;UBERON:0002346!2.41e-15!90;UBERON:0004872!2.53e-15!84;UBERON:0000955!6.04e-15!69;UBERON:0006238!6.04e-15!69;UBERON:0002020!5.45e-14!34;UBERON:0003528!5.45e-14!34;UBERON:0001893!5.73e-14!34;UBERON:0000055!7.31e-14!69;UBERON:0002791!1.42e-13!33;UBERON:0001869!2.88e-13!32;UBERON:0000119!4.54e-13!312;UBERON:0000483!4.80e-13!309;UBERON:0001009!1.74e-12!113;UBERON:0001981!1.61e-11!60;UBERON:0007500!1.61e-11!60;UBERON:0004537!1.61e-11!60;UBERON:0006965!1.61e-11!60;UBERON:0004535!3.07e-11!110;UBERON:0002049!4.81e-11!79;UBERON:0007798!4.81e-11!79;UBERON:0000956!9.16e-11!25;UBERON:0000203!9.16e-11!25;UBERON:0003914!1.26e-10!118;UBERON:0003056!3.19e-10!61;UBERON:0000467!6.55e-10!625;UBERON:0001986!9.09e-10!18;UBERON:0004638!9.09e-10!18;UBERON:0004852!9.09e-10!18;UBERON:0000480!9.19e-10!626;UBERON:0000468!1.21e-09!659;UBERON:0002619!2.80e-09!22;UBERON:0006914!7.66e-09!25;UBERON:0001950!1.15e-08!20;UBERON:0000487!3.19e-08!22;UBERON:0000153!7.77e-08!129;UBERON:0007811!7.77e-08!129;UBERON:0000064!3.45e-07!219;UBERON:0000033!4.25e-07!123;UBERON:0003103!6.58e-07!69;UBERON:0007100!8.27e-07!27;UBERON:0000922!9.84e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.65e-14;32!UBERON:0003528;1.83e-14;34!UBERON:0002020;1.83e-14;34!UBERON:0001893;1.85e-14;34!UBERON:0002791;1.87e-14;32!UBERON:0002780;2.96e-14;41!UBERON:0001890;2.96e-14;41!UBERON:0007023;7.40e-14;114!UBERON:0000073;4.08e-13;53!UBERON:0002616;4.08e-13;53!UBERON:0000956;8.74e-13;25!UBERON:0000203;8.74e-13;25!UBERON:0004638;1.46e-11;18!UBERON:0001986;1.46e-11;18!UBERON:0004852;1.46e-11;18!UBERON:0002619;5.66e-11;22!UBERON:0001950;3.20e-10;20!UBERON:0006914;1.69e-09;25!UBERON:0000487;2.61e-09;22!UBERON:0000955;3.60e-08;68!UBERON:0001017;5.41e-08;75!UBERON:0001016;3.20e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.13e-51,114;UBERON:0004111,1.30e-26,240;UBERON:0000025,2.72e-24,192;UBERON:0001049,2.78e-24,56;UBERON:0005068,2.78e-24,56;UBERON:0006241,2.78e-24,56;UBERON:0007135,2.78e-24,56;UBERON:0000073,8.65e-23,53;UBERON:0002616,8.65e-23,53;UBERON:0002780,1.90e-19,41;UBERON:0001890,1.90e-19,41;UBERON:0003080,1.90e-19,41;UBERON:0006240,1.90e-19,41;UBERON:0003075,1.44e-18,82;UBERON:0007284,1.44e-18,82;UBERON:0001017,1.59e-18,81;UBERON:0002346,8.68e-17,86;UBERON:0003528,1.06e-16,34;UBERON:0002020,1.06e-16,34;UBERON:0001893,1.12e-16,34;UBERON:0000955,2.69e-16,68;UBERON:0006238,2.69e-16,68;UBERON:0001016,2.92e-16,89;UBERON:0001869,8.04e-16,32;UBERON:0002791,9.60e-16,32;UBERON:0010314,2.47e-15,132;UBERON:0000956,8.99e-13,25;UBERON:0000203,8.99e-13,25;UBERON:0000055,2.62e-12,68;UBERON:0004872,3.50e-12,83;UBERON:0010371,4.82e-12,104;UBERON:0004638,1.47e-11,18;UBERON:0001986,1.47e-11,18;UBERON:0004852,1.47e-11,18;UBERON:0003056,3.07e-11,61;UBERON:0000483,3.35e-11,306;UBERON:0002619,5.78e-11,22;UBERON:0000119,9.20e-11,309;UBERON:0001950,3.22e-10,20;UBERON:0011216,1.03e-09,223;UBERON:0006914,1.67e-09,25;UBERON:0007500,1.76e-09,59;UBERON:0001981,1.76e-09,59;UBERON:0004537,1.76e-09,59;UBERON:0006965,1.76e-09,59;UBERON:0000487,2.62e-09,22;UBERON:0002049,5.79e-09,78;UBERON:0007798,5.79e-09,78;UBERON:0001009,9.72e-09,112;UBERON:0003914,1.91e-08,117;UBERON:0004535,1.44e-07,109;UBERON:0004121,8.88e-07,171;UBERON:0000924,8.88e-07,171;UBERON:0006601,8.88e-07,171 | |||
|phase1_expression=5.4503513781167,0.214100523890983,43.1320476533672,49.0359161930339,8.93922188854576,114.276346657148,0,1.89515962028049,6.00726944859629,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0.672325146451775,1.80808358407193,1.46062018077475,1.46379839637152,5.54044761345546,1.83600622119828,0.313454721478088,28.0511267388436,97.8652139271122,43.6888385789914,0,0,0,4.72037132218685,0.767658796194425,0.309632246632152,0,0,0,0,0,162.067442512836,0.553995408531877,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.345786571101,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,1.90810750907073,0,0,0,204.86555929749,89.6813700770458,93.5013500951523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,8.71911117614727,18.5400714673119,0.361439152384566,0,0,0,0.486634870302636,0.756278537312543,0,0.702678285545008,77.0811859304039,0,0,0,0.348259474598534,0,0,0,0,53.6658499890104,33.5491492091389,31.5897856462911,19.2204700254163,23.9114678639646,50.3466016750323,43.8889429727302,41.3466814670926,58.3456670806205,255.726548152208,466.073519895283,41.8149658145182,400.993960551643,14.7065232138347,78.5837689445307,70.2788861595708,48.7228738598789,69.9317293801431,9.19899824795299,3.79706263827252,7.14486801328588,0,0,0,0.993943903390637,8.61087479319142,0.264818361626438,9.17877186396204,1.77334191099179,10.6528744027038,3.20246987189115,0.24666754841716,9.02512002659322,6.06198024313596,8.82694276812677,0,0,0,0,3.99330275081114,0,0.23486899728753,0.647491777472526,0.280901613404497,0,0,0.103325781175765,0,0,5.46096817162816,0,0,0.125118519871964,0,0,0,0,1.24775401476023,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,4.84938170456436,0,0,0,0,0,0,0,0.662648841607426,1.74290914304278,0.829288440122964,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,119.581183649193,70.1208869017229,2.057870056657,8.82052268313252,0,1.96565443335525,6.49868897349544,0,0,0,0,0,0,0,0,0,0,6.72396348855446,0,343.303412775834,185.194205030644,93.0342804427186,0,0,0,0,0,0,0,0,0,0,2.68367875415648,0,0,2.90259361757081,1.44119953416961,3.02981840223312,0,0,0,10.2643467613623,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0,0,7.15312891703765,9.298330278116,0,0,0.514414748524284,0,0.266422179016099,0,0,0,10.7492940816933,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,2.03275699377971,5.20559415430487,3.09315525111078,3.35032530668698,6.37938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,2.27407504055985,3.10419213877515,0,0.184369168541703,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0.604780586659361,1.24053903909388,0,0,2.05022638809122,18.933168215468,0.160853921143607,96.4717431892441,0.154209693802656,0,0,0,0,0,0,0,0,0,0.786746489756545,0,0.15403067420883,0,0,0,296.84413242504,34.1888347605796,126.310810919752,1091.92894904725,0.270946437543853,0,0,2.49322802678617,0,0,0,0.256450125116389,0.328014645699706,0,72.334790176701,0,0,0,0,6.42735719376638,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0.10115778085555,0.464845549297286,1.88887408098384,2.0911118104818,0.308033580176089,0,0.869932992075073,0.9266210955196,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0,0.404364963146632,0,0,0,1.21856744815642,1.05650146756755,1.77449884830381,0,13.5609739944291,0.551365343546124,9.28814565337708,21.0456424921806,0,0,0.202910376962704,1.54911749049875,0,0,0,0,0,21.7440864356594,14.4889752902357,0,0,0,0.670302275535787,0,68.7249745670488,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,1.4348364545594,1008.07540510716,394.88407321294,634.809074588925,40.2531205940449,0,0.684704037099577,0,0,280.008600483852,0,0,0,0,0,0,0,0,0,2.46174797895425,82.7594376136508,469.298402908928,693.65606503222,0,131.710853165433,5.33986295697859,0,0,1.67121139316383,0,0,8.94732882989668,13.0822557261777,0,0,0,198.251748309814,50.0073887111377,0,0,0,0,0,0,0,122.021892772887,0,0,19.3866549219044,20.0379092029599,11.9768278800717,0,0,139.19991848348,0,0,0,0,0,1.21537496453305,9.74315524395223,13.9891868805473,1.52581736317083,12.0531393325035,8.57088094965288,14.2600508150082,0,0,139.818619701399,0,0,0,0,19.4590707436471,0.457987967009312,43.708851633528,0,73.1527994800815,318.7940058845,0,0,0,0,57.058231853956,0,500.308557007788,0,0,78.6256925552019,50.7746420249167,64.1581652180307,0,0,0,17.7264979739181,459.074414254907,14.7586600806964,0,0,0,77.3385429584805,118.570901727691,11.3246921803281,78.856851376353,0,0,0,0,0,0,0,0,0,0,0,156.205641408375,0,0,0,0,116.968753885034,0,181.010573365206,0,0,16.2708745606608,0.195551382734803,0,78.9776080535604,0,0,0,0,0,0,0,0,0,0,0,25.2176521258112,26.1489273683707,45.98877170411,0,0,275.372447654443,201.43201270627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| ||
|short_description=p1@CD34 | |||
}} | }} |
Latest revision as of 17:13, 24 September 2015
Short description: | p1@CD34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD34_5end |
Coexpression cluster: | C1470_acute_Renal_clear_Endothelial_diaphragm_skeletal_Lymphatic |
Association with transcript: | 0bp_to_ENST00000537704_5end |
EntrezGene: | CD34 |
HGNC: | 1662 |
UniProt: | B4DG27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.41e-16 | 24 |
endothelial cell | 1.79e-15 | 36 |
meso-epithelial cell | 9.21e-13 | 45 |
blood vessel endothelial cell | 1.47e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.47e-11 | 18 |
lining cell | 1.56e-07 | 58 |
barrier cell | 1.56e-07 | 58 |