FFCP PHASE1:Hg19::chr1:41249474..41249500,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:41249474..41249500,+ to FFCP PHASE1:Hg19::chr1:41249474..41249500,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9132 | |EntrezGene=9132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6298 | |HGNC=6298 | ||
|TSSclassifier=strong | |||
|UniProt=P56696,B3KQH8 | |UniProt=P56696,B3KQH8 | ||
|association_with_transcript=-183bp_to_ENST00000347132,NM_004700,NM_172163,uc001cgh.1,uc001cgi.1_5end | |||
|cluster_id=chr1:41249474..41249500,+ | |||
|description=CAGE_peak_1_at_KCNQ4_5end | |||
|id=chr1:41249474..41249500,+ | |||
|ontology_enrichment_celltype=CL:0000039!5.49e-07!7;CL:0000586!5.49e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.52e-08;2!CL:0000242;8.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.83e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.19e-07;2 | |||
|ontology_enrichment_disease=DOID:0050687!7.69e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.00e-36!115;UBERON:0005743!2.05e-16!86;UBERON:0000073!6.41e-16!94;UBERON:0001016!6.41e-16!94;UBERON:0001049!2.14e-14!57;UBERON:0005068!2.14e-14!57;UBERON:0006241!2.14e-14!57;UBERON:0007135!2.14e-14!57;UBERON:0001017!2.87e-14!82;UBERON:0002346!1.50e-13!90;UBERON:0003075!9.65e-13!86;UBERON:0007284!9.65e-13!86;UBERON:0002616!1.42e-11!59;UBERON:0002780!1.46e-11!41;UBERON:0001890!1.46e-11!41;UBERON:0006240!1.46e-11!41;UBERON:0000955!1.86e-11!69;UBERON:0006238!1.86e-11!69;UBERON:0003080!4.46e-11!42;UBERON:0001893!5.55e-11!34;UBERON:0002020!1.39e-10!34;UBERON:0003528!1.39e-10!34;UBERON:0002791!3.33e-10!33;UBERON:0001869!8.97e-10!32;UBERON:0000924!1.94e-09!173;UBERON:0006601!1.94e-09!173;UBERON:0003056!5.47e-09!61;UBERON:0004121!8.59e-09!169;UBERON:0003135!7.95e-08!11;UBERON:0002619!1.09e-07!22;UBERON:0000153!1.22e-07!129;UBERON:0007811!1.22e-07!129;UBERON:0001950!1.34e-07!20;UBERON:0000033!3.79e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.14e-14;34!UBERON:0000369;1.26e-13;4!UBERON:0002435;1.26e-13;4!UBERON:0000204;1.26e-13;4!UBERON:0002791;1.69e-13;32!UBERON:0001869;5.01e-13;32!UBERON:0003528;5.14e-13;34!UBERON:0002020;5.14e-13;34!UBERON:0009663;1.27e-11;7!UBERON:0005383;7.57e-11;3!UBERON:0005382;7.57e-11;3!UBERON:0001950;8.26e-11;20!UBERON:0002780;2.03e-10;41!UBERON:0001890;2.03e-10;41!UBERON:0002619;1.00e-09;22!UBERON:0001017;2.82e-09;75!UBERON:0002420;5.82e-09;9!UBERON:0000125;5.82e-09;9!UBERON:0007245;5.82e-09;9!UBERON:0002308;5.82e-09;9!UBERON:0010009;5.82e-09;9!UBERON:0010011;5.82e-09;9!UBERON:0000454;5.82e-09;9!UBERON:0000200;1.39e-08;6!UBERON:0007023;1.65e-08;114!UBERON:0000956;2.06e-08;25!UBERON:0000203;2.06e-08;25!UBERON:0000073;2.32e-08;53!UBERON:0002616;2.32e-08;53!UBERON:0001873;1.19e-07;2!UBERON:0000955;1.39e-07;68!UBERON:0001016;9.47e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.09e-30,114;UBERON:0001893,2.32e-17,34;UBERON:0001869,2.95e-16,32;UBERON:0002791,4.66e-16,32;UBERON:0002780,8.24e-16,41;UBERON:0001890,8.24e-16,41;UBERON:0003080,8.24e-16,41;UBERON:0006240,8.24e-16,41;UBERON:0000955,4.55e-15,68;UBERON:0006238,4.55e-15,68;UBERON:0000073,5.69e-15,53;UBERON:0002616,5.69e-15,53;UBERON:0003528,5.97e-15,34;UBERON:0002020,5.97e-15,34;UBERON:0001049,5.98e-14,56;UBERON:0005068,5.98e-14,56;UBERON:0006241,5.98e-14,56;UBERON:0007135,5.98e-14,56;UBERON:0000369,6.86e-14,4;UBERON:0002435,6.86e-14,4;UBERON:0000204,6.86e-14,4;UBERON:0010082,6.86e-14,4;UBERON:0001017,3.04e-13,81;UBERON:0001016,8.55e-13,89;UBERON:0009663,1.35e-11,7;UBERON:0003056,5.35e-11,61;UBERON:0001950,6.40e-11,20;UBERON:0005383,6.49e-11,3;UBERON:0005382,6.49e-11,3;UBERON:0003075,1.12e-10,82;UBERON:0007284,1.12e-10,82;UBERON:0002346,5.74e-10,86;UBERON:0002619,7.99e-10,22;UBERON:0010371,1.52e-09,104;UBERON:0002420,6.08e-09,9;UBERON:0000125,6.08e-09,9;UBERON:0007245,6.08e-09,9;UBERON:0002308,6.08e-09,9;UBERON:0010009,6.08e-09,9;UBERON:0010011,6.08e-09,9;UBERON:0000454,6.08e-09,9;UBERON:0000200,1.01e-08,6;UBERON:0000956,1.69e-08,25;UBERON:0000203,1.69e-08,25;UBERON:0001873,8.31e-08,2;UBERON:0010122,8.31e-08,2;UBERON:0004121,5.64e-07,171;UBERON:0000924,5.64e-07,171;UBERON:0006601,5.64e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.982343066232845,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19552671033272,0.795178609928912,1.51052125730374,0.725627385107593,1.26160425437814,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0.501689773854853,0.764628819135115,0,1.34324852833307,0.219259876645935,0,0.256450125116389,0.328014645699706,0.976135183992909,0.309123034943167,0,0,0,0,0,0.386682873168488,0,0.307007349452259,0,0,0,0.170453254832202,0.445160178233687,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0.973865820823666,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,1.22896305723383,0.671028323677248,1.33479313369527,0,0,0,0,0,0,1.12284324244932,0.293016358543788,0,0,0,0,0,0,0,0.984685914873589,0,0,1.47787785689595,2.39097585901284,0.552567831062295,0,0,0,0,0.988551862620595,0,0.511572370226872,3.55116260292961,0,0,1.93866549219044,1.29875337426592,0,0,0.962059999958153,0,0,0,0.472775363535873,2.41320361269025,0.291604613383254,0.347249989866585,2.65722415744152,1.5677537021303,1.52581736317083,2.43274371848694,0.295547618953547,1.31631238292384,0,0,1.23120413606075,0,3.68902247020896,0.628303510868405,1.19512109114209,0,0,0,0,0.627921025580099,0.997270091400938,0.225595660617181,0.588187602953219,0.671286347903371,0.75901493089674,1.11255605286265,0.632994193584081,0,0.282706142867882,2.16388639742091,0,2.4768118060935,0,0,0,0,0.471807930864739,0,0.702793337176017,0,0,1.45668227720456,0.789168805698781,0,0.61214552326098,0.126373159256976,0.751617097072463,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0,0.347119476670262,0,0,0.52418000472609,0,0,0,0,1.93978032976839,0.970817393606503,1.12990370390266,0,0,1.89932387867636,0.195551382734803,0.801588202515337,1.28071796843612,0,0.144090417154106,0.229073192331831,0.343189995723929,0.720273989940749,0.124252535565433,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,1.60412296808179,0,0.199679000498991,1.28767814440971,0,0.403100834920358,0,0,0,0,0,0.196854963029498,0,0,0.817220436669454,0.643012593860077,0.550157746388935,0.415440338029185,0,0.77380195455795,2.18698403968889,0,0.157611414598396,0.629455057619977,0.211200673038813,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0.113312091520126,0,0,0.129282956361551,0.66116300871345,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0.157054096250234,0,0.610131324509816,1.3771002377715,0,0.776503360757966,0.745156835296601,1.66018361923477,0,0,0.285465333544967,0,1.87333962322753,4.34763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0.345430341731199,0,1.24432592536558,0,0,0,0.327609848846413,0,0.211312123358627,0,0.640150378164845,0,0,0,0.139879507719444,0,0,0,3.61711666268562,0.436838552768056,0.509197589862076,0,0.247871528518004,0.558644917973244,0,1.65609664502632,0,0,0,1.66995985250795,0,1.11743701340006,0.82046545696302,0,1.86724581653388,1.13032951942296,0,0,0.353909170043221,0,0,0,0,0,1.0529445968896,0,0.781514011233092,0.523813388962845,0,0.591424344868181,1.68843961545987,0,0.620060389503552,1.64881106504158,0,0.548257766857182,1.98484471355718,0.175871244359621,0,0,0.336283722218824,0,0.227662191351298,0.266107110487916,0.115233987555779,0,0.40781839786099,1.64431933907123,0,0,1.0989032999072,2.04250266890802,0.280272163313789,0.913158720509496,0,0,10.6500050823218,0.47404083519818,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0.22910686854405,0,0,0.223710863595585,1.66855397145913,0.853425474875886,0.647428837187895,2.66923297826242,0,0.485710993059139,6.31636551347685,0.198950775161368,0.237840181555137,0.22589216407792,1.64910775118144,0.905777061400041,0.385870790539723,0,0,5.63841140033983,0.235676547101626,0.785233868459781,0.594092800654172,0,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0.458729283404541,1.003377082060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| ||
|short_description=p1@KCNQ4 | |||
}} | }} |
Latest revision as of 02:00, 18 September 2015
Short description: | p1@KCNQ4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNQ4_5end |
Coexpression cluster: | NA |
Association with transcript: | -183bp_to_ENST00000347132, NM_004700, NM_172163, uc001cgh.1, uc001cgi.1_5end |
EntrezGene: | KCNQ4 |
HGNC: | 6298 |
UniProt: | P56696B3KQH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.83e-08 | 2 |