FFCP PHASE1:Hg19::chr22:40573904..40573915,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:40573904..40573915,+ to FFCP PHASE1:Hg19::chr22:40573904..40573915,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23112 | |EntrezGene=23112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29190 | |HGNC=29190 | ||
|TSSclassifier=strong | |||
|UniProt=A8MYY3,Q9UPQ9 | |UniProt=A8MYY3,Q9UPQ9 | ||
|association_with_transcript=-13bp_to_ENST00000400140,ENST00000454349,ENST00000489500,NM_001162501,NM_015088,uc003ayn.3,uc011aor.1_5end | |||
|cluster_id=chr22:40573904..40573915,+ | |||
|description=CAGE_peak_7_at_TNRC6B_5end | |||
|id=chr22:40573904..40573915,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.57e-13;2!CL:0000558;3.57e-13;2!CL:0002591;2.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.46e-13,2;CL:0000765,8.46e-13,2;CL:0000050,8.46e-13,2;CL:0000038,8.46e-13,2;CL:0000558,8.46e-13,2;CL:0000547,8.46e-13,2;CL:0000549,8.46e-13,2;CL:0000550,8.46e-13,2;CL:0000552,8.46e-13,2;CL:0002591,3.20e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.83e-16!86;UBERON:0001017!8.79e-16!82;UBERON:0000955!1.03e-15!69;UBERON:0006238!1.03e-15!69;UBERON:0001049!5.23e-15!57;UBERON:0005068!5.23e-15!57;UBERON:0006241!5.23e-15!57;UBERON:0007135!5.23e-15!57;UBERON:0000073!6.19e-14!94;UBERON:0001016!6.19e-14!94;UBERON:0002780!1.43e-13!41;UBERON:0001890!1.43e-13!41;UBERON:0006240!1.43e-13!41;UBERON:0002616!1.63e-13!59;UBERON:0001869!4.09e-13!32;UBERON:0003080!7.28e-13!42;UBERON:0002020!1.04e-12!34;UBERON:0003528!1.04e-12!34;UBERON:0001893!2.69e-12!34;UBERON:0000153!4.72e-12!129;UBERON:0007811!4.72e-12!129;UBERON:0002791!1.11e-11!33;UBERON:0000033!1.56e-11!123;UBERON:0002346!2.22e-11!90;UBERON:0003075!2.61e-11!86;UBERON:0007284!2.61e-11!86;UBERON:0000956!3.24e-11!25;UBERON:0000203!3.24e-11!25;UBERON:0007023!1.60e-10!115;UBERON:0002619!4.08e-10!22;UBERON:0000924!9.94e-10!173;UBERON:0006601!9.94e-10!173;UBERON:0004121!1.49e-09!169;UBERON:0001950!9.49e-09!20;UBERON:0003056!6.03e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.56e-57;22!UBERON:0000956;4.68e-50;25!UBERON:0000203;4.68e-50;25!UBERON:0001950;5.84e-47;20!UBERON:0001869;2.30e-34;32!UBERON:0003528;2.91e-34;34!UBERON:0002020;2.91e-34;34!UBERON:0002791;3.38e-34;32!UBERON:0001893;2.67e-28;34!UBERON:0000200;6.16e-26;6!UBERON:0002780;9.62e-25;41!UBERON:0001890;9.62e-25;41!UBERON:0001870;2.55e-19;3!UBERON:0000073;3.71e-17;53!UBERON:0002616;3.71e-17;53!UBERON:0002771;1.28e-13;2!UBERON:0002702;1.28e-13;2!UBERON:0001954;3.57e-13;2!UBERON:0003022;3.57e-13;2!UBERON:0002421;3.57e-13;2!UBERON:0002600;3.57e-13;2!UBERON:0000955;5.79e-12;68!UBERON:0001017;6.33e-12;75!UBERON:0000349;8.28e-12;5!UBERON:0001872;1.51e-11;5!UBERON:0002021;1.51e-11;5!UBERON:0001871;9.40e-09;6!UBERON:0001016;9.75e-09;83!UBERON:0002581;2.00e-07;1!UBERON:0002022;2.00e-07;1!UBERON:0007029;2.00e-07;1!UBERON:0003112;2.00e-07;1!UBERON:0011158;2.00e-07;1!UBERON:0003128;2.00e-07;1!UBERON:0001703;2.00e-07;1!UBERON:0002241;2.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.51e-57,22;UBERON:0000956,2.32e-50,25;UBERON:0000203,2.32e-50,25;UBERON:0001950,4.15e-47,20;UBERON:0003528,8.15e-42,34;UBERON:0002020,8.15e-42,34;UBERON:0002791,4.98e-39,32;UBERON:0001869,4.98e-39,32;UBERON:0001893,1.27e-36,34;UBERON:0002780,2.77e-34,41;UBERON:0001890,2.77e-34,41;UBERON:0003080,2.77e-34,41;UBERON:0006240,2.77e-34,41;UBERON:0000073,4.06e-33,53;UBERON:0002616,4.06e-33,53;UBERON:0001049,3.54e-31,56;UBERON:0005068,3.54e-31,56;UBERON:0006241,3.54e-31,56;UBERON:0007135,3.54e-31,56;UBERON:0000955,3.97e-31,68;UBERON:0006238,3.97e-31,68;UBERON:0001017,1.59e-28,81;UBERON:0000200,2.83e-26,6;UBERON:0001016,2.62e-25,89;UBERON:0003075,1.05e-22,82;UBERON:0007284,1.05e-22,82;UBERON:0003056,3.77e-22,61;UBERON:0002346,1.77e-21,86;UBERON:0007023,2.98e-19,114;UBERON:0010371,3.33e-19,104;UBERON:0001870,3.53e-19,3;UBERON:0004121,1.46e-15,171;UBERON:0000924,1.46e-15,171;UBERON:0006601,1.46e-15,171;UBERON:0010314,2.79e-14,132;UBERON:0002771,7.10e-14,2;UBERON:0002702,7.10e-14,2;UBERON:0001954,1.82e-13,2;UBERON:0003022,1.82e-13,2;UBERON:0002421,1.82e-13,2;UBERON:0002600,1.82e-13,2;UBERON:0000349,5.57e-12,5;UBERON:0011216,5.57e-12,223;UBERON:0002021,1.55e-11,5;UBERON:0001872,1.73e-11,5;UBERON:0001871,7.37e-09,6;UBERON:0000025,1.48e-08,192;UBERON:0002022,1.10e-07,1;UBERON:0007029,1.61e-07,1;UBERON:0003112,1.72e-07,1;UBERON:0011158,1.72e-07,1;UBERON:0003128,1.72e-07,1;UBERON:0001703,1.72e-07,1;UBERON:0002241,1.72e-07,1;UBERON:0004761,1.72e-07,1;UBERON:0009617,1.72e-07,1;UBERON:0002581,2.50e-07,1;UBERON:0004111,7.09e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0.627713197974014,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.205601498999509,0.501559486172034,0,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0,0.520237390239513,0,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0.339928028092699,0.383220493601921,0,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0.649094787309367,0,0.664789802594326,0.238490624305342,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.397227542439656,0,0.354668382198357,0,0,0,0.622422070799533,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.485618833104395,0.140450806702248,0,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.841680569770331,0.500474079487857,0.554128230968366,0,0,0.150238058906597,0.226864366320042,0,0,0,0.300091096084402,0.206105058476878,0,0.558350568994769,0.506328996723799,0,0.504867548488229,0.184099797284599,0.323292113637624,0.355009592516614,0.10075209822764,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0,0.265059536642971,0.232387885739037,0.207322110030741,0.756962552626885,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0,0.482022059766964,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0.738651018262192,0,0.297262324577456,0.93733833986777,0.16798212819886,0.425325291727159,0,0,0,0,0.264145302039678,0.414656231081544,0.144119953416961,0.50496973370552,0,0,0,0,0.308482478109971,0.300343057843917,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0.537182889719687,0,0,0,0.128343036279748,0,0,0,0.502548796003046,1.91381625495949,0.749007023947182,0,0,0.24538298343828,0,0,0,0,0,0.234282829985426,0,0,0,0,0.184369168541703,0.60818530127658,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0.153461973288062,0,0.384417447767103,0,0.160853921143607,0,0,0,0.492762936082855,0,0.116210378459959,0.120859449591622,0.601519410909855,0.0920809889358963,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,1.31555925987561,1.0457418040996,0.256450125116389,0,0.325378394664303,0.103041011647722,0.27470839445503,0.330037999682352,0,0.650060246036521,0,0.193341436584244,0.308097234229289,0.460511024178389,0,0.214840489736547,0.290033387828457,0.255679882248303,0.623224249527161,0,0,0.510450849978337,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0.409499734223957,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0,0.405820753925408,0,0,0.286822704408103,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0,0,1.08006287447623,0,0.320472213382419,0,0.735120647943095,0.557409525377156,0.144269212976445,0.142283686696828,0.159426272728822,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0.338583555603207,0.321176150207399,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0.19538809540204,0.556812347790485,1.23087398947712,0.270455678475983,0,0,0.37428108081644,0,0.242721043499027,0,0,0.23874448473769,0.296964680832639,0,0,2.2507106625682,0,0.16480387422676,0.211125408127993,0,0.552567831062295,0.251932747854276,0.306806047506464,0.123084805461069,0.311039587661807,0.359473404589307,0,0.511572370226872,0.0986434056369336,0,0,1.93866549219044,0.927680981618513,1.99613798001194,0,0,0,0.227586896570999,0.254253650292766,0,0,0.291604613383254,0.173624994933292,0,0.723578631752448,0,1.10579259931225,0,0.658156191461918,0,0.139423744278603,0.153900517007594,0.227884111694002,0,0.0897576444097721,0.108647371922008,0.638002319463839,0.36639037360744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| ||
|short_description=p7@TNRC6B | |||
}} | }} |
Latest revision as of 19:53, 24 September 2015
Short description: | p7@TNRC6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNRC6B_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000400140, ENST00000454349, ENST00000489500, NM_001162501, NM_015088, uc003ayn.3, uc011aor.1_5end |
EntrezGene: | TNRC6B |
HGNC: | 29190 |
UniProt: | A8MYY3Q9UPQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.46e-13 | 2 |
erythroblast | 8.46e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 8.46e-13 | 2 |
erythroid progenitor cell | 8.46e-13 | 2 |
reticulocyte | 8.46e-13 | 2 |
proerythroblast | 8.46e-13 | 2 |
basophilic erythroblast | 8.46e-13 | 2 |
polychromatophilic erythroblast | 8.46e-13 | 2 |
orthochromatic erythroblast | 8.46e-13 | 2 |
smooth muscle cell of the pulmonary artery | 3.20e-07 | 1 |