FFCP PHASE1:Hg19::chr2:27712537..27712579,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:27712537..27712579,- to FFCP PHASE1:Hg19::chr2:27712537..27712579,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26160 | |EntrezGene=26160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30391 | |HGNC=30391 | ||
|TSSclassifier=strong | |||
|UniProt=B3KP68,Q9UG01 | |UniProt=B3KP68,Q9UG01 | ||
|association_with_transcript=0bp_to_ENST00000507184,ENST00000511842,NM_015662,uc002rku.2,uc002rkv.2,uc002rkw.2,uc010ezc.2,uc010yls.1,uc010ylt.1_5end | |||
|cluster_id=chr2:27712537..27712579,- | |||
|coexpression_cluster_id=C596 | |||
|description=CAGE_peak_2_at_IFT172_5end | |||
|id=chr2:27712537..27712579,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.44e-11;82!UBERON:0008947;1.06e-08;29!UBERON:0002532;4.16e-07;206!UBERON:0010316;4.16e-07;206 | |||
|ontology_enrichment_disease=DOID:305!3.12e-15!106;DOID:0050687!5.10e-13!143;DOID:162!5.01e-07!235;DOID:14566!7.16e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.99e-14,106;DOID:0050687,2.32e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.73e-24!57;UBERON:0005068!8.73e-24!57;UBERON:0006241!8.73e-24!57;UBERON:0007135!8.73e-24!57;UBERON:0000073!1.08e-21!94;UBERON:0001016!1.08e-21!94;UBERON:0001017!1.24e-21!82;UBERON:0002780!1.76e-21!41;UBERON:0001890!1.76e-21!41;UBERON:0006240!1.76e-21!41;UBERON:0000955!3.09e-21!69;UBERON:0006238!3.09e-21!69;UBERON:0005743!4.29e-21!86;UBERON:0007023!5.90e-21!115;UBERON:0003080!2.93e-20!42;UBERON:0002616!3.43e-20!59;UBERON:0002020!1.16e-17!34;UBERON:0003528!1.16e-17!34;UBERON:0001893!1.25e-17!34;UBERON:0001869!4.03e-17!32;UBERON:0003075!4.04e-17!86;UBERON:0007284!4.04e-17!86;UBERON:0002791!5.21e-17!33;UBERON:0002346!7.45e-17!90;UBERON:0004121!7.70e-17!169;UBERON:0000924!7.79e-17!173;UBERON:0006601!7.79e-17!173;UBERON:0000153!4.31e-15!129;UBERON:0007811!4.31e-15!129;UBERON:0000033!1.36e-14!123;UBERON:0002619!1.79e-14!22;UBERON:0003056!3.61e-14!61;UBERON:0001950!3.51e-13!20;UBERON:0000956!3.86e-13!25;UBERON:0000203!3.86e-13!25;UBERON:0000064!3.45e-08!219;UBERON:0000475!1.19e-07!365;UBERON:0004111!3.53e-07!241;UBERON:0000477!3.76e-07!286;UBERON:0000481!4.89e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.93e-22;32!UBERON:0002780;3.57e-22;41!UBERON:0001890;3.57e-22;41!UBERON:0002619;3.93e-22;22!UBERON:0003528;2.20e-21;34!UBERON:0002020;2.20e-21;34!UBERON:0001893;2.36e-21;34!UBERON:0002791;1.25e-20;32!UBERON:0001950;4.44e-20;20!UBERON:0000073;4.61e-20;53!UBERON:0002616;4.61e-20;53!UBERON:0000956;1.82e-18;25!UBERON:0000203;1.82e-18;25!UBERON:0000955;1.62e-14;68!UBERON:0001017;1.94e-13;75!UBERON:0001016;1.04e-11;83!UBERON:0007023;2.85e-09;114!UBERON:0002420;1.09e-07;9!UBERON:0007245;1.09e-07;9!UBERON:0010009;1.09e-07;9!UBERON:0010011;1.09e-07;9!UBERON:0000454;1.09e-07;9!UBERON:0001894;1.53e-07;7!UBERON:0000125;1.67e-07;9!UBERON:0002308;1.67e-07;9!UBERON:0001871;1.95e-07;6!UBERON:0002298;2.06e-07;6!UBERON:0000200;5.71e-07;6!UBERON:0003135;6.14e-07;11!UBERON:0000349;9.50e-07;5!UBERON:0004732;9.50e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.31e-35,56;UBERON:0005068,1.31e-35,56;UBERON:0006241,1.31e-35,56;UBERON:0007135,1.31e-35,56;UBERON:0000073,2.04e-35,53;UBERON:0002616,2.04e-35,53;UBERON:0000955,9.73e-32,68;UBERON:0006238,9.73e-32,68;UBERON:0002780,1.82e-30,41;UBERON:0001890,1.82e-30,41;UBERON:0003080,1.82e-30,41;UBERON:0006240,1.82e-30,41;UBERON:0001017,4.30e-30,81;UBERON:0007023,2.16e-29,114;UBERON:0001016,1.37e-28,89;UBERON:0001869,1.09e-24,32;UBERON:0003528,1.91e-24,34;UBERON:0002020,1.91e-24,34;UBERON:0001893,2.12e-24,34;UBERON:0002791,1.28e-22,32;UBERON:0003075,2.64e-22,82;UBERON:0007284,2.64e-22,82;UBERON:0002619,4.61e-22,22;UBERON:0002346,3.78e-21,86;UBERON:0001950,5.23e-20,20;UBERON:0003056,6.16e-20,61;UBERON:0011216,2.29e-19,223;UBERON:0000956,2.07e-18,25;UBERON:0000203,2.07e-18,25;UBERON:0004121,1.65e-16,171;UBERON:0000924,1.65e-16,171;UBERON:0006601,1.65e-16,171;UBERON:0010371,2.62e-16,104;UBERON:0010314,4.29e-11,132;UBERON:0004111,6.31e-09,240;UBERON:0000025,4.34e-08,192;UBERON:0002420,1.19e-07,9;UBERON:0007245,1.19e-07,9;UBERON:0010009,1.19e-07,9;UBERON:0010011,1.19e-07,9;UBERON:0000454,1.19e-07,9;UBERON:0001894,1.58e-07,7;UBERON:0006222,1.58e-07,7;UBERON:0000125,1.80e-07,9;UBERON:0002308,1.80e-07,9;UBERON:0001871,1.80e-07,6;UBERON:0002298,2.12e-07,6;UBERON:0000200,5.09e-07,6;UBERON:0004732,6.99e-07,13;UBERON:0003135,7.09e-07,11;UBERON:0003076,8.60e-07,15;UBERON:0003057,8.60e-07,15;UBERON:0000349,9.52e-07,5 | |||
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| ||
|short_description=p2@IFT172 | |||
}} | }} |
Latest revision as of 17:36, 16 September 2015
Short description: | p2@IFT172 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFT172_5end |
Coexpression cluster: | C596_testis_medulla_pituitary_caudate_amygdala_hippocampus_putamen |
Association with transcript: | 0bp_to_ENST00000507184, ENST00000511842, NM_015662, uc002rku.2, uc002rkv.2, uc002rkw.2, uc010ezc.2, uc010yls.1, uc010ylt.1_5end |
EntrezGene: | IFT172 |
HGNC: | 30391 |
UniProt: | B3KP68Q9UG01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.99e-14 | 106 |
cell type cancer | 2.32e-11 | 143 |