FFCP PHASE1:Hg19::chr4:166300279..166300290,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:166300279..166300290,+ to FFCP PHASE1:Hg19::chr4:166300279..166300290,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1363 | |EntrezGene=1363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2303 | |HGNC=2303 | ||
|TSSclassifier=strong | |||
|UniProt=P16870 | |UniProt=P16870 | ||
|association_with_transcript=67bp_to_ENST00000261510_5end | |||
|cluster_id=chr4:166300279..166300290,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_CPE_5end | |||
|id=chr4:166300279..166300290,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.50e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.83e-40!82;UBERON:0005743!2.47e-39!86;UBERON:0007023!6.25e-38!115;UBERON:0000073!8.25e-38!94;UBERON:0001016!8.25e-38!94;UBERON:0001049!3.41e-36!57;UBERON:0005068!3.41e-36!57;UBERON:0006241!3.41e-36!57;UBERON:0007135!3.41e-36!57;UBERON:0000955!3.89e-35!69;UBERON:0006238!3.89e-35!69;UBERON:0002616!9.78e-35!59;UBERON:0002346!4.41e-30!90;UBERON:0003075!6.85e-29!86;UBERON:0007284!6.85e-29!86;UBERON:0003080!3.97e-27!42;UBERON:0002780!9.47e-27!41;UBERON:0001890!9.47e-27!41;UBERON:0006240!9.47e-27!41;UBERON:0000924!2.37e-24!173;UBERON:0006601!2.37e-24!173;UBERON:0000153!1.49e-23!129;UBERON:0007811!1.49e-23!129;UBERON:0000033!1.63e-23!123;UBERON:0004121!3.48e-23!169;UBERON:0002020!2.93e-22!34;UBERON:0003528!2.93e-22!34;UBERON:0001893!3.14e-22!34;UBERON:0002791!1.64e-21!33;UBERON:0001869!6.01e-21!32;UBERON:0003056!9.31e-21!61;UBERON:0002619!1.02e-16!22;UBERON:0000475!3.34e-16!365;UBERON:0000956!5.97e-16!25;UBERON:0000203!5.97e-16!25;UBERON:0000477!1.16e-15!286;UBERON:0001950!3.31e-15!20;UBERON:0000025!1.04e-14!194;UBERON:0004111!3.66e-14!241;UBERON:0000481!1.78e-13!347;UBERON:0000119!3.72e-13!312;UBERON:0000483!1.72e-12!309;UBERON:0000468!7.41e-11!659;UBERON:0003076!4.71e-10!15;UBERON:0003057!4.71e-10!15;UBERON:0000064!1.94e-09!219;UBERON:0000062!2.38e-09!511;UBERON:0000922!3.47e-09!612;UBERON:0004733!4.17e-08!12;UBERON:0002028!4.17e-08!12;UBERON:0007277!4.17e-08!12;UBERON:0002050!4.55e-08!605;UBERON:0005423!4.55e-08!605;UBERON:0002420!6.29e-08!9;UBERON:0007245!6.29e-08!9;UBERON:0010009!6.29e-08!9;UBERON:0010011!6.29e-08!9;UBERON:0000454!6.29e-08!9;UBERON:0002308!8.15e-08!9;UBERON:0000125!8.15e-08!9;UBERON:0000923!8.17e-08!604;UBERON:0005291!8.17e-08!604;UBERON:0006598!8.17e-08!604;UBERON:0002532!8.17e-08!604;UBERON:0004732!4.90e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.69e-25;41!UBERON:0001890;1.69e-25;41!UBERON:0000073;1.14e-24;53!UBERON:0002616;1.14e-24;53!UBERON:0001893;2.14e-24;34!UBERON:0003528;2.32e-24;34!UBERON:0002020;2.32e-24;34!UBERON:0001869;3.92e-24;32!UBERON:0002791;4.62e-24;32!UBERON:0002619;1.36e-23;22!UBERON:0001017;1.88e-21;75!UBERON:0001950;2.12e-21;20!UBERON:0000956;9.57e-20;25!UBERON:0000203;9.57e-20;25!UBERON:0000955;9.87e-20;68!UBERON:0001016;1.30e-17;83!UBERON:0007023;1.69e-13;114!UBERON:0002420;8.28e-11;9!UBERON:0007245;8.28e-11;9!UBERON:0010009;8.28e-11;9!UBERON:0010011;8.28e-11;9!UBERON:0000454;8.28e-11;9!UBERON:0000125;1.22e-10;9!UBERON:0002308;1.22e-10;9!UBERON:0011216;3.34e-09;132!UBERON:0004733;4.84e-09;12!UBERON:0002028;4.84e-09;12!UBERON:0009663;1.10e-08;7!UBERON:0004732;4.38e-08;13!UBERON:0001871;5.60e-08;6!UBERON:0001894;6.15e-08;7!UBERON:0000200;1.34e-07;6!UBERON:0002298;1.55e-07;6!UBERON:0000349;5.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.24e-49,81;UBERON:0001049,3.04e-46,56;UBERON:0005068,3.04e-46,56;UBERON:0006241,3.04e-46,56;UBERON:0007135,3.04e-46,56;UBERON:0007023,1.37e-45,114;UBERON:0001016,1.62e-44,89;UBERON:0000955,5.79e-44,68;UBERON:0006238,5.79e-44,68;UBERON:0000073,3.17e-43,53;UBERON:0002616,3.17e-43,53;UBERON:0002346,7.10e-39,86;UBERON:0003075,7.19e-38,82;UBERON:0007284,7.19e-38,82;UBERON:0002780,2.94e-35,41;UBERON:0001890,2.94e-35,41;UBERON:0003080,2.94e-35,41;UBERON:0006240,2.94e-35,41;UBERON:0010371,9.64e-30,104;UBERON:0003528,9.19e-29,34;UBERON:0002020,9.19e-29,34;UBERON:0001893,1.01e-28,34;UBERON:0011216,1.26e-27,223;UBERON:0004121,4.69e-27,171;UBERON:0000924,4.69e-27,171;UBERON:0006601,4.69e-27,171;UBERON:0001869,7.18e-27,32;UBERON:0002791,9.22e-27,32;UBERON:0003056,2.13e-26,61;UBERON:0010314,7.96e-24,132;UBERON:0002619,1.47e-23,22;UBERON:0001950,2.32e-21,20;UBERON:0000956,1.02e-19,25;UBERON:0000203,1.02e-19,25;UBERON:0000025,2.73e-14,192;UBERON:0003076,7.77e-12,15;UBERON:0003057,7.77e-12,15;UBERON:0004111,1.40e-11,240;UBERON:0002420,8.43e-11,9;UBERON:0007245,8.43e-11,9;UBERON:0010009,8.43e-11,9;UBERON:0010011,8.43e-11,9;UBERON:0000454,8.43e-11,9;UBERON:0000125,1.23e-10,9;UBERON:0002308,1.23e-10,9;UBERON:0000119,2.84e-09,309;UBERON:0004733,4.48e-09,12;UBERON:0002028,4.48e-09,12;UBERON:0007277,4.48e-09,12;UBERON:0009663,1.13e-08,7;UBERON:0000483,1.33e-08,306;UBERON:0004732,4.08e-08,13;UBERON:0001871,5.62e-08,6;UBERON:0001894,6.50e-08,7;UBERON:0006222,6.50e-08,7;UBERON:0000200,1.34e-07,6;UBERON:0002298,1.48e-07,6;UBERON:0000349,5.50e-07,5 | |||
|phase1_expression=1.45342703416445,1.92690471501885,2.39622486963151,4.00293193412522,1.34088328328186,4.36169262050184,0,0,0,0,0,0,0,3.21792517696121,4.30816588446291,0.672325146451775,0,0,0,3.69363174230364,0.204000691244253,0.940364164434263,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,1.00267582127178,0.724232594804119,0.795285947051099,0.486634870302636,1.32348744029695,1.10864698731282,1.14185221401064,3.92937226493138,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.898117490504679,0.112611480483322,0,0,0.366403487860815,0,0,0,0.496971951695318,0.759783069987479,0.794455084879313,4.58938593198102,2.4826786753885,1.68203280042692,0,0.98667019366864,0.622422070799533,0,0.163461903113459,5.60022482286246,3.45705554687999,0,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0.206651562351531,0,0,1.82032272387605,0,0.336672227908132,0.250237039743928,0,0,0,0.150238058906597,0,0,1.92201649936711,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0,0,0.0920498986422993,1.45481451136931,0.355009592516614,0.201504196455281,0,0,0.272746120590835,0,0.365921118388786,0.397589304964456,0.348581828608555,0.725627385107593,0.252320850875628,0.72995471815166,0,2.57296375277154,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,0,4.9388881359768,1.47008711385542,0,0,0,0,0.368965315629341,0.857839051492628,0.219500570817251,0,0,0.740707561268237,0,0,0,1.507095264676,2.11335649624479,0,0,0,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,0,0,1.52249488594842,1.16253575405585,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,1.45770409648969,1.74384027533312,1.1734125731352,0.258543431515556,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.857867961948885,0,0,0.325736184293735,0.355391948742546,0,1.50719688529793,4.35766729300147,1.89948683245908,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0.716243852959582,0,0,0,0,2.28685161800217,3.90419561572865,1.54657762555539,3.18280904135263,1.91381625495949,0,0,0,7.36148950314839,3.50119364741774,1.62759014219841,1.24782516918484,1.24900292158013,0.315404830067869,0.117141414992713,2.70851489754947,0,0,1.32845119707087,0.921845842708516,0,2.74121620447837,3.0882908142977,0,0,0,0,0,0,2.97729369382532,1.53461973288062,2.80660094433074,4.48487022394953,4.09365799253363,3.53878626515936,2.96836132889982,0,0.532685175939381,0,0,0.232420756919918,0.483437798366489,0.40101294060657,0.368323955743585,0.114814448164607,0,0,0,0.0770153371044148,0,1.46139224653261,0.422206515571503,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0.656029291399411,0.325378394664303,0.515205058238611,6.50143200210238,8.2509499920588,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.460511024178389,0.275673144969061,0.644521469209642,0.435050081742686,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,0,1.5740617341532,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0.572499546967965,2.232950216158,1.58189712359363,0,0,0.42793898803392,0,0,0.899362287916574,0.823611089208164,0.353437207037059,0,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,1.32687795048244,0,1.15755106853338,0,0.202910376962704,0,0,0.143411352204052,0.392996164052485,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,1.75809815126273,0.121360521749513,0,0,0,0.593929361665277,0,17.8946576597934,15.3329663887459,0.333926115068718,0,0.211125408127993,11.7556313068131,1.10513566212459,7.55798243562828,0.102268682502155,0,0.311039587661807,0,1.25314822272926,0,1.08507746200627,0,0,13.5706584453331,16.6054895709714,5.98841394003583,0,0,2.17499872630438,1.2517279311405,3.0510438035132,3.07303986298317,0.689486746482929,1.45802306691627,6.25049981759852,15.0576035588353,17.3658871620587,30.5163472634166,19.7936875276892,19.5061428509341,18.8671441552416,0.32681539055697,0.278847488557207,2.23155749661011,8.43171213267809,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0.158936578980379,0,1.95879369790977,0,0.649165919226273,0.995261931078505,1.06149077404007,1.22206028986725,0,0,0.104421949505455,9.57096088325614,4.81546588379273,13.118808960619,0,0.391329237864179,0,1.18375320854817,2.41981432097328,3.36680037793539,4.29668741473718,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0,0.0979923974143777,0,3.84398670132466,0,0,0,0.0821154570532092,1.64881328030313,0,7.23138370497704,0.137041924646751,0,13.8650643143374,0.586654148204409,0.561111741760736,1.06726497369676,1.99809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| 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|short_description=p6@CPE | |||
}} | }} |
Latest revision as of 14:29, 16 September 2015
Short description: | p6@CPE |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CPE_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 67bp_to_ENST00000261510_5end |
EntrezGene: | CPE |
HGNC: | 2303 |
UniProt: | P16870 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data