FFCP PHASE1:Hg19::chr5:80256152..80256157,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:80256152..80256157,+ to FFCP PHASE1:Hg19::chr5:80256152..80256157,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5924 | |EntrezGene=5924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9876 | |HGNC=9876 | ||
|TSSclassifier=strong | |||
|UniProt=O14827 | |UniProt=O14827 | ||
|association_with_transcript=-333bp_to_ENST00000265080_5end | |||
|cluster_id=chr5:80256152..80256157,+ | |||
|description=CAGE_peak_4_at_RASGRF2_5end | |||
|id=chr5:80256152..80256157,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.23e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.32e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.81e-08;82!UBERON:0003056;9.35e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!8.09e-26!42;UBERON:0007023!1.11e-25!115;UBERON:0002780!4.69e-25!41;UBERON:0001890!4.69e-25!41;UBERON:0006240!4.69e-25!41;UBERON:0001049!3.05e-24!57;UBERON:0005068!3.05e-24!57;UBERON:0006241!3.05e-24!57;UBERON:0007135!3.05e-24!57;UBERON:0003075!1.42e-23!86;UBERON:0007284!1.42e-23!86;UBERON:0003056!1.51e-23!61;UBERON:0001893!1.18e-21!34;UBERON:0002346!1.51e-21!90;UBERON:0002616!1.66e-21!59;UBERON:0005743!2.14e-21!86;UBERON:0001017!3.18e-21!82;UBERON:0001869!6.89e-21!32;UBERON:0002791!1.12e-20!33;UBERON:0000955!3.06e-20!69;UBERON:0006238!3.06e-20!69;UBERON:0002020!2.39e-19!34;UBERON:0003528!2.39e-19!34;UBERON:0000073!4.35e-18!94;UBERON:0001016!4.35e-18!94;UBERON:0002619!2.78e-16!22;UBERON:0000956!1.40e-15!25;UBERON:0000203!1.40e-15!25;UBERON:0001950!3.40e-15!20;UBERON:0000033!1.46e-14!123;UBERON:0000153!6.04e-14!129;UBERON:0007811!6.04e-14!129;UBERON:0004121!1.25e-10!169;UBERON:0004111!2.77e-10!241;UBERON:0000924!6.80e-10!173;UBERON:0006601!6.80e-10!173;UBERON:0000477!2.61e-09!286;UBERON:0000025!2.43e-08!194;UBERON:0002420!7.23e-08!9;UBERON:0007245!7.23e-08!9;UBERON:0010009!7.23e-08!9;UBERON:0010011!7.23e-08!9;UBERON:0000454!7.23e-08!9;UBERON:0000200!1.77e-07!6;UBERON:0000064!6.09e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.39e-34;32!UBERON:0001893;3.55e-31;34!UBERON:0002619;8.89e-31;22!UBERON:0002791;1.43e-30;32!UBERON:0001950;1.49e-28;20!UBERON:0003528;1.96e-27;34!UBERON:0002020;1.96e-27;34!UBERON:0000956;6.12e-27;25!UBERON:0000203;6.12e-27;25!UBERON:0000200;3.37e-22;6!UBERON:0002780;5.31e-20;41!UBERON:0001890;5.31e-20;41!UBERON:0001870;6.27e-17;3!UBERON:0000073;1.28e-12;53!UBERON:0002616;1.28e-12;53!UBERON:0001017;4.77e-12;75!UBERON:0002702;1.06e-11;2!UBERON:0000955;1.60e-11;68!UBERON:0000349;8.96e-10;5!UBERON:0001016;1.84e-09;83!UBERON:0002420;2.85e-09;9!UBERON:0007245;2.85e-09;9!UBERON:0010009;2.85e-09;9!UBERON:0010011;2.85e-09;9!UBERON:0000454;2.85e-09;9!UBERON:0003124;2.23e-08;3!UBERON:0000920;2.23e-08;3!UBERON:0001871;4.17e-07;6!UBERON:0009663;4.17e-07;7!UBERON:0002581;7.74e-07;1!UBERON:0002902;7.74e-07;1!UBERON:0002022;7.74e-07;1!UBERON:0009899;7.74e-07;1!UBERON:0007190;7.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.49e-38,32;UBERON:0001893,1.97e-35,34;UBERON:0002791,5.47e-33,32;UBERON:0002619,3.74e-31,22;UBERON:0003528,6.51e-31,34;UBERON:0002020,6.51e-31,34;UBERON:0002780,6.33e-29,41;UBERON:0001890,6.33e-29,41;UBERON:0003080,6.33e-29,41;UBERON:0006240,6.33e-29,41;UBERON:0001950,7.43e-29,20;UBERON:0000956,2.86e-27,25;UBERON:0000203,2.86e-27,25;UBERON:0003056,1.45e-26,61;UBERON:0000955,7.75e-26,68;UBERON:0006238,7.75e-26,68;UBERON:0000073,1.07e-24,53;UBERON:0002616,1.07e-24,53;UBERON:0001017,2.02e-23,81;UBERON:0001049,3.41e-23,56;UBERON:0005068,3.41e-23,56;UBERON:0006241,3.41e-23,56;UBERON:0007135,3.41e-23,56;UBERON:0000200,2.51e-22,6;UBERON:0003075,5.08e-21,82;UBERON:0007284,5.08e-21,82;UBERON:0001016,1.15e-20,89;UBERON:0002346,7.60e-20,86;UBERON:0001870,4.73e-17,3;UBERON:0010371,1.14e-15,104;UBERON:0007023,4.90e-14,114;UBERON:0004121,4.40e-12,171;UBERON:0000924,4.40e-12,171;UBERON:0006601,4.40e-12,171;UBERON:0002702,7.52e-12,2;UBERON:0010314,1.95e-11,132;UBERON:0000349,4.96e-10,5;UBERON:0002420,1.93e-09,9;UBERON:0007245,1.93e-09,9;UBERON:0010009,1.93e-09,9;UBERON:0010011,1.93e-09,9;UBERON:0000454,1.93e-09,9;UBERON:0000920,2.32e-08,3;UBERON:0001871,2.42e-07,6;UBERON:0009663,3.41e-07,7;UBERON:0011216,3.45e-07,223;UBERON:0002022,6.96e-07,1;UBERON:0002902,7.35e-07,1;UBERON:0009899,7.35e-07,1;UBERON:0007190,7.77e-07,1;UBERON:0002581,8.67e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,0.786021525498329,0.822405995998037,0,0.32592226663359,1.4203434172042,0,0.111410456885174,0,0,0,0,0,0.657751618414705,0.829050053357545,1.44901542867526,0.296573126324121,0.802622484269139,1.04535523804977,0.339928028092699,0,0,0.759059076058509,0.637130828648193,0.651083453856419,0,0.602300476311091,0.255973222308837,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0.283604451492204,0.886917589850256,0.351339142772504,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0.56530794192401,0,0.550236083880135,0.835979866147242,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0.468642863667593,0.624320153660641,0,0,0,0,0,1.02077085627447,0,0.413303124703062,0,0,0.910161361938026,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0,0.286804595389004,0,0.265059536642971,0.348581828608555,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3032332212413,0,0,0.231860809950154,0.352226082707465,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,1.09970290300263,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.640365346820666,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0.200506470303285,0.460404944679482,0.229628896329213,0.364182336013434,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0,0.353437207037059,0.404364963146632,0,0,0,0,0,0.136499911407986,0.848432591722276,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,1.13929437434833,0.238231775457789,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0.994147647766298,1.68803299692615,0,0,0,0.398495976502139,0.276283915531148,0,0.306806047506464,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,1.85536196323703,0,0,0,0.724999575434793,0.568967241427498,0,0,0,0,0,1.77148277162768,0.60298219312704,0,0.221158519862449,0.295547618953547,1.31631238292384,0,0,0.153900517007594,0,0,1.6156375993759,0,2.23300811812344,0.457987967009312,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0,0,0,0.404406797884062,0,0.937057782901357,0,0,0,0.394584402849391,0,0.30607276163049,0.758238955541855,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0.274083849293502,0.19871461170299,3.10222900183806,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,1.28929632425987,0,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0.86661500537946,0.576911008668165,0.741438982396034,0.393709926058995,0,1.59045937961861,0.136203406111576,0.321506296930038,0.275078873194468,0.415440338029185,0,0,2.91597871958518,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0.7520696820681,0.306345576763462,0.983617892129413,0,3.54427271986794,1.46431517882356,1.502291168478,1.72022758707021,0.776503360757966,0.372578417648301,1.24513771442608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0.449803112163605,0.310525913752519,0,0,0,0,0.761610424337591,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,1.47727217721857,0,0.159633859057151,1.23069818544453,0.756215088665154,2.48966108871184,0.807378228159255,0,0,0.353909170043221,0,0,0,0,0,0.300841313397029,0,0,0,0,0,2.4313530462622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| ||
|short_description=p4@RASGRF2 | |||
}} | }} |
Latest revision as of 23:15, 18 September 2015
Short description: | p4@RASGRF2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RASGRF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -333bp_to_ENST00000265080_5end |
EntrezGene: | RASGRF2 |
HGNC: | 9876 |
UniProt: | O14827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.32e-08 | 3 |