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FFCP PHASE1:Mm9::chr10:126516062..126516080,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:126516062..126516080,+
|DHSsupport=NA
|short_description=p4@Agap2
|DPIdataset=NA
|description=CAGE_peak_4_at_Agap2_5end
|association_with_transcript=99bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end
|EntrezGene=216439
|EntrezGene=216439
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q3UHD9
|UniProt=Q3UHD9
|association_with_transcript=99bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end
|cluster_id=chr10:126516062..126516080,+
|description=CAGE_peak_4_at_Agap2_5end
|id=chr10:126516062..126516080,+
|ontology_enrichment_celltype=CL:0000117!2.29e-14!23;CL:0000337!2.29e-14!23;CL:0000540!2.08e-09!33;CL:0000047!2.08e-09!33;CL:0000031!2.08e-09!33;CL:0000404!2.08e-09!33;CL:0000393!6.88e-08!39;CL:0000211!6.88e-08!39;CL:0002319!7.78e-08!43;CL:0000221!9.20e-08!44;CL:0000133!9.20e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,7.56e-22,23;CL:0000337,7.56e-22,23;CL:0000540,6.96e-13,33;CL:0000047,6.96e-13,33;CL:0000031,6.96e-13,33;CL:0000404,6.96e-13,33;CL:0000393,8.50e-10,39;CL:0000211,8.50e-10,39;CL:0002319,4.34e-09,43;CL:0000221,1.01e-08,44;CL:0000133,1.01e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.62e-24!52;UBERON:0005068!1.62e-24!52;UBERON:0006241!1.62e-24!52;UBERON:0007135!1.62e-24!52;UBERON:0001017!3.26e-24!73;UBERON:0005743!3.26e-24!73;UBERON:0000033!8.15e-24!63;UBERON:0002346!7.58e-23!71;UBERON:0003075!7.58e-23!71;UBERON:0007284!7.58e-23!71;UBERON:0000955!8.58e-23!50;UBERON:0006238!8.58e-23!50;UBERON:0000073!9.82e-23!75;UBERON:0001016!9.82e-23!75;UBERON:0002616!5.43e-22!49;UBERON:0003056!2.10e-20!49;UBERON:0002020!2.24e-20!34;UBERON:0003080!1.35e-18!40;UBERON:0004121!2.12e-18!102;UBERON:0000924!2.12e-18!102;UBERON:0006601!2.12e-18!102;UBERON:0002780!5.07e-18!39;UBERON:0001890!5.07e-18!39;UBERON:0006240!5.07e-18!39;UBERON:0002791!1.07e-16!29;UBERON:0003528!1.07e-16!29;UBERON:0001893!1.07e-16!29;UBERON:0007811!1.63e-12!86;UBERON:0000956!1.07e-11!21;UBERON:0001869!1.07e-11!21;UBERON:0000203!1.07e-11!21;UBERON:0000153!4.31e-11!94;UBERON:0002619!8.43e-10!17;UBERON:0002021!2.04e-08!10;UBERON:0000411!2.04e-08!10;UBERON:0001950!2.04e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.32e-31,34;UBERON:0000073,1.94e-29,54;UBERON:0001049,1.51e-27,52;UBERON:0005068,1.51e-27,52;UBERON:0006241,1.51e-27,52;UBERON:0007135,1.51e-27,52;UBERON:0001017,4.09e-26,73;UBERON:0003528,3.00e-25,29;UBERON:0002791,3.00e-25,29;UBERON:0001893,3.00e-25,29;UBERON:0001016,5.45e-25,75;UBERON:0002346,3.98e-23,64;UBERON:0003075,3.98e-23,64;UBERON:0007284,3.98e-23,64;UBERON:0000955,1.03e-22,47;UBERON:0006238,1.03e-22,47;UBERON:0003080,1.08e-21,40;UBERON:0002616,1.35e-21,46;UBERON:0002780,7.74e-21,39;UBERON:0001890,7.74e-21,39;UBERON:0006240,7.74e-21,39;UBERON:0003056,4.67e-19,49;UBERON:0004121,5.18e-19,95;UBERON:0000924,5.18e-19,95;UBERON:0006601,5.18e-19,95;UBERON:0010371,1.57e-18,73;UBERON:0000956,2.49e-17,21;UBERON:0001869,2.49e-17,21;UBERON:0000203,2.49e-17,21;UBERON:0002619,2.52e-14,17;UBERON:0002021,2.02e-12,10;UBERON:0000411,2.02e-12,10;UBERON:0001950,2.02e-12,10;UBERON:0010314,6.38e-12,92;UBERON:0002420,4.89e-09,8;UBERON:0007245,4.89e-09,8;UBERON:0010009,4.89e-09,8;UBERON:0010011,4.89e-09,8;UBERON:0000454,4.89e-09,8;UBERON:0002240,2.46e-07,6;UBERON:0005174,2.46e-07,6;UBERON:0001137,2.46e-07,6;UBERON:0000369,2.89e-07,5;UBERON:0002435,2.89e-07,5;UBERON:0000204,2.89e-07,5;UBERON:0010082,2.89e-07,5;UBERON:0001948,5.63e-07,5;UBERON:0002315,5.63e-07,5
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,11.5320382689971,12.6957835025288,12.0427966666174,0,0,0,0,0,0.898800331555214,1.53687322128622,1.34796496001021,2.02508907497536,1.68259969081106,12.8542942981712,10.3808214247258,2.9397791811589,3.35459148563827,1.83843757322004,1.10115880999389,4.59674417106676,3.68655679814984,14.7712642257817,21.6825715337711,18.2319679694866,1.11673199600552,1.68828783009504,4.43114918552749,15.9099436155781,17.5117167382897,13.2343606535963,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0.461230994512117,0.452167921657868,0,0.125666591329675,0,0.722996784599558,0,0.161766849947409,0,0,0,1.46390398505774,3.35114730901528,0.255457055208591,0,0,0,2.99581278809645,13.2675174817402,13.6963243803022,16.339486098074,11.5071955798649,3.1168206683934,8.4365456795234,0.509196819251581,0,0,0.420883711772948,0.390361328888111,0.459804208866946,0.540186389416048,0.90422890701429,1.02054748726992,1.5373646434182,0.843315521037559,1.29351685369508,0,0,0.703804496655795,0.43839146485515,0,0.696504333044333,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0.648550476366846,0.877199924551994,0.439100230582101,0.402619256281115,22.7113144449257,8.02655976558419,0,0,0,0.928946687441754,0,0.201683524623343,0.667134131534611,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0,0.350679099451593,0.569128834118316,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.327726629431476,0,0,0,0,0,0,1.76605648986571,0.937693492737625,0.163934945376675,0,0,0,0.861693590931196,0,0,0.283076530788832,0,0,0.395287777946524,19.6006003017302,0.283880170416537,2.13678724400706,0.977321756121456,0.494910368917606,0,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.646793418913773,0.214337035031592,1.41872186913819,0.178368817602071,0.822745103010605,0.913394847343798,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,1.01659733563424,0,0,0.436725127492355,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.516639293910924,0,0.469428954583016,0.2604087696879,0.314578033277133,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0.549454872801795,0,0,19.7663144915973,29.9211403729665,22.3429250241365,35.229902380456,8.90607275701835,7.55393897389701,12.1504050041725,13.0593148935024,11.3285602246051,10.3552062350364,0.103787347584177,1.59609949360412,1.19513524027894,2.67417388775123,2.93458427679175,2.02227859295016,1.33348036680969,2.06035057238894,1.28367683836726,0.758091635291392,1.52087579934144,3.01802146217722,1.96647165686753,1.08842759088278,1.60819313075717,3.33405583898152,1.15884325944855,1.54327376370964,4.12085900803307,1.03039244094078,1.71434626192708,1.77475806159337,1.43061713968393,1.0174249164263,1.41164070622996,1.77690676572521,1.64635175585495,1.57841826862706,0.407412341537585,2.80571135828869,1.54225523561426,2.46261205938909,2.86461730218783,2.16911577660352,2.3148793317737,3.99696924700713,1.40358965067245,0.644613162144895,1.53030665655075,0.220591419119515,0.695603506861264
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,11.5320382689971,12.6957835025288,12.0427966666174,0,0,0,0,0,0.898800331555214,1.53687322128622,1.34796496001021,2.02508907497536,1.68259969081106,12.8542942981712,10.3808214247258,2.9397791811589,3.35459148563827,1.83843757322004,1.10115880999389,4.59674417106676,3.68655679814984,14.7712642257817,21.6825715337711,18.2319679694866,1.11673199600552,1.68828783009504,4.43114918552749,15.9099436155781,17.5117167382897,13.2343606535963,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0.461230994512117,0.452167921657868,0,0.125666591329675,0,0.722996784599558,0,0.161766849947409,0,0,0,1.46390398505774,3.35114730901528,0.255457055208591,0,0,0,2.99581278809645,13.2675174817402,13.6963243803022,16.339486098074,11.5071955798649,3.1168206683934,8.4365456795234,0.509196819251581,0,0,0.420883711772948,0.390361328888111,0.459804208866946,0.540186389416048,0.90422890701429,1.02054748726992,1.5373646434182,0.843315521037559,1.29351685369508,0,0,0.703804496655795,0.43839146485515,0,0.696504333044333,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0.648550476366846,0.877199924551994,0.439100230582101,0.402619256281115,22.7113144449257,8.02655976558419,0,0,0,0.928946687441754,0,0.201683524623343,0.667134131534611,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0,0.350679099451593,0.569128834118316,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.327726629431476,0,0,0,0,0,0,1.76605648986571,0.937693492737625,0.163934945376675,0,0,0,0.861693590931196,0,0,0.283076530788832,0,0,0.395287777946524,19.6006003017302,0.283880170416537,2.13678724400706,0.977321756121456,0.494910368917606,0,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.646793418913773,0.214337035031592,1.41872186913819,0.178368817602071,0.822745103010605,0.913394847343798,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,1.01659733563424,0,0,0.436725127492355,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.516639293910924,0,0.469428954583016,0.2604087696879,0.314578033277133,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0.549454872801795,0,0,19.7663144915973,29.9211403729665,22.3429250241365,35.229902380456,8.90607275701835,7.55393897389701,12.1504050041725,13.0593148935024,11.3285602246051,10.3552062350364,0.103787347584177,1.59609949360412,1.19513524027894,2.67417388775123,2.93458427679175,2.02227859295016,1.33348036680969,2.06035057238894,1.28367683836726,0.758091635291392,1.52087579934144,3.01802146217722,1.96647165686753,1.08842759088278,1.60819313075717,3.33405583898152,1.15884325944855,1.54327376370964,4.12085900803307,1.03039244094078,1.71434626192708,1.77475806159337,1.43061713968393,1.0174249164263,1.41164070622996,1.77690676572521,1.64635175585495,1.57841826862706,0.407412341537585,2.80571135828869,1.54225523561426,2.46261205938909,2.86461730218783,2.16911577660352,2.3148793317737,3.99696924700713,1.40358965067245,0.644613162144895,1.53030665655075,0.220591419119515,0.695603506861264
|short_description=p4@Agap2
}}
}}

Latest revision as of 17:17, 25 September 2015

Short description:p4@Agap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Agap2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 99bp_to_ENSMUST00000039259, ENSMUST00000105254, NM_001033263, uc007hhx.1, uc007hhy.1_5end
EntrezGene:Agap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Agap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.23
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.23
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F113.70
cortex, adult.CNhs10473.12-14D516.34
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B28.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E822.71
hippocampus, neonate N00.CNhs11228.627-43G18.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.56e-2223
neuroblast (sensu Vertebrata)7.56e-2223
neuron6.96e-1333
neuronal stem cell6.96e-1333
neuroblast6.96e-1333
electrically signaling cell6.96e-1333
electrically responsive cell8.50e-1039
electrically active cell8.50e-1039
neural cell4.34e-0943
ectodermal cell1.01e-0844
neurectodermal cell1.01e-0844

Uber anatomy
Ontology termp-valuen
gray matter4.32e-3134
regional part of nervous system1.94e-2954
neural tube1.51e-2752
neural rod1.51e-2752
future spinal cord1.51e-2752
neural keel1.51e-2752
central nervous system4.09e-2673
brain grey matter3.00e-2529
regional part of telencephalon3.00e-2529
telencephalon3.00e-2529
nervous system5.45e-2575
neurectoderm3.98e-2364
neural plate3.98e-2364
presumptive neural plate3.98e-2364
brain1.03e-2247
future brain1.03e-2247
anterior neural tube1.08e-2140
regional part of brain1.35e-2146
regional part of forebrain7.74e-2139
forebrain7.74e-2139
future forebrain7.74e-2139
pre-chordal neural plate4.67e-1949
ectoderm-derived structure5.18e-1995
ectoderm5.18e-1995
presumptive ectoderm5.18e-1995
ecto-epithelium1.57e-1873
cerebral cortex2.49e-1721
cerebral hemisphere2.49e-1721
pallium2.49e-1721
regional part of cerebral cortex2.52e-1417
occipital lobe2.02e-1210
visual cortex2.02e-1210
neocortex2.02e-1210
structure with developmental contribution from neural crest6.38e-1292
basal ganglion4.89e-098
nuclear complex of neuraxis4.89e-098
aggregate regional part of brain4.89e-098
collection of basal ganglia4.89e-098
cerebral subcortex4.89e-098
spinal cord2.46e-076
dorsal region element2.46e-076
dorsum2.46e-076
corpus striatum2.89e-075
striatum2.89e-075
ventral part of telencephalon2.89e-075
future corpus striatum2.89e-075
regional part of spinal cord5.63e-075
gray matter of spinal cord5.63e-075
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