Personal tools

FFCP PHASE1:Mm9::chr11:61267423..61267484,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:61267423..61267484,-
|DHSsupport=NA
|short_description=p1@Rnf112
|DPIdataset=NA
|description=CAGE_peak_1_at_Rnf112_5end
|association_with_transcript=0bp_to_ENSMUST00000130648,ENSMUST00000136966_5end
|EntrezGene=22671
|EntrezGene=22671
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000130648,ENSMUST00000136966_5end
|cluster_id=chr11:61267423..61267484,-
|description=CAGE_peak_1_at_Rnf112_5end
|id=chr11:61267423..61267484,-
|ontology_enrichment_celltype=CL:0000117!6.38e-12!23;CL:0000337!6.38e-12!23;CL:0000540!7.81e-12!33;CL:0000047!7.81e-12!33;CL:0000031!7.81e-12!33;CL:0000404!7.81e-12!33;CL:0000393!4.27e-08!39;CL:0000211!4.27e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,9.67e-15,23;CL:0000337,9.67e-15,23;CL:0000540,1.57e-11,33;CL:0000047,1.57e-11,33;CL:0000031,1.57e-11,33;CL:0000404,1.57e-11,33;CL:0000393,2.54e-08,39;CL:0000211,2.54e-08,39;CL:0002319,9.50e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.37e-27!73;UBERON:0005743!4.37e-27!73;UBERON:0000073!2.29e-25!75;UBERON:0001016!2.29e-25!75;UBERON:0002346!6.98e-25!71;UBERON:0003075!6.98e-25!71;UBERON:0007284!6.98e-25!71;UBERON:0001049!1.16e-24!52;UBERON:0005068!1.16e-24!52;UBERON:0006241!1.16e-24!52;UBERON:0007135!1.16e-24!52;UBERON:0000955!8.16e-24!50;UBERON:0006238!8.16e-24!50;UBERON:0002616!3.52e-23!49;UBERON:0004121!1.32e-22!102;UBERON:0000924!1.32e-22!102;UBERON:0006601!1.32e-22!102;UBERON:0000033!3.72e-22!63;UBERON:0003080!1.95e-20!40;UBERON:0002780!9.50e-20!39;UBERON:0001890!9.50e-20!39;UBERON:0006240!9.50e-20!39;UBERON:0003056!1.40e-19!49;UBERON:0002020!6.36e-17!34;UBERON:0002791!2.54e-14!29;UBERON:0003528!2.54e-14!29;UBERON:0001893!2.54e-14!29;UBERON:0000956!9.93e-10!21;UBERON:0001869!9.93e-10!21;UBERON:0000203!9.93e-10!21;UBERON:0007811!2.09e-09!86;UBERON:0002021!1.50e-08!10;UBERON:0000411!1.50e-08!10;UBERON:0001950!1.50e-08!10;UBERON:0002619!2.55e-08!17;UBERON:0000153!2.38e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.97e-34,54;UBERON:0001049,2.39e-32,52;UBERON:0005068,2.39e-32,52;UBERON:0006241,2.39e-32,52;UBERON:0007135,2.39e-32,52;UBERON:0001017,3.89e-31,73;UBERON:0001016,1.21e-29,75;UBERON:0000955,1.15e-28,47;UBERON:0006238,1.15e-28,47;UBERON:0002616,7.27e-28,46;UBERON:0003080,2.80e-26,40;UBERON:0002346,3.78e-26,64;UBERON:0003075,3.78e-26,64;UBERON:0007284,3.78e-26,64;UBERON:0002780,2.13e-25,39;UBERON:0001890,2.13e-25,39;UBERON:0006240,2.13e-25,39;UBERON:0002020,8.81e-22,34;UBERON:0003056,2.44e-21,49;UBERON:0010371,4.11e-21,73;UBERON:0004121,1.35e-20,95;UBERON:0000924,1.35e-20,95;UBERON:0006601,1.35e-20,95;UBERON:0003528,1.86e-18,29;UBERON:0002791,1.86e-18,29;UBERON:0001893,1.86e-18,29;UBERON:0010314,8.86e-16,92;UBERON:0000956,1.43e-12,21;UBERON:0001869,1.43e-12,21;UBERON:0000203,1.43e-12,21;UBERON:0002619,8.69e-11,17;UBERON:0002021,1.87e-10,10;UBERON:0000411,1.87e-10,10;UBERON:0001950,1.87e-10,10;UBERON:0001894,8.98e-08,10;UBERON:0006222,8.98e-08,10;UBERON:0002420,3.63e-07,8;UBERON:0007245,3.63e-07,8;UBERON:0010009,3.63e-07,8;UBERON:0010011,3.63e-07,8;UBERON:0000454,3.63e-07,8
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.351796553718,0,0,0.159992422793407,0,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,7.40587370980846,8.23980824558033,0,0,0,0,0,0.299600110518405,0.384218305321555,1.97010263386108,3.64516033495565,1.89292465216244,10.2834354385369,8.1721360152097,4.65465037016825,4.2172007248024,1.83843757322004,18.7196997698961,27.4527776883154,23.8090126547177,8.30883612700221,10.7040543014819,9.89735404057844,17.8677119360884,20.8222165711722,20.6277634498694,10.9012576625257,8.54230084794618,6.15118171223492,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0.845060518660083,0,0,0,0,0,0,1.25602267690966,0,1.03909497345377,2.60227990149204,1.21786191324856,0.922461989024234,1.50722640552623,1.76383060703557,0.879666139307728,0,0.578397427679647,0,0,0,0,0,130.58023546715,125.45857738126,0.255457055208591,0,0,0,33.7028938660851,93.7876235778184,26.0104508873629,76.1350522442171,90.7789873522673,43.6354893575076,67.4923654361872,0.712875546952214,0.124406970610093,0,0.841767423545896,0.260240885925407,0.229902104433473,0.360124259610698,1.05493372485001,0.476255494059295,0.768682321709099,1.3118241438362,2.32833033665114,0,0,0,0.43839146485515,0,0,0.61734640922383,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0.219550115291051,0,96.5230863909344,16.0531195311684,0,0,1.06644125267617,0.696710015581316,0.644337306610467,1.4117846723634,0.444756087689741,0.951128130562796,0,0.494096864172033,0.502670417600539,0.994782360205754,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0.589676985339609,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,2.4633883530163,0.651859905768103,0.848725428875941,0.704070744865506,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,18.7844190285717,18.0505997351993,0,0.504941854408746,0.315508219416257,1.17131623288992,0.430846795465598,0.716906393857656,0.891194696329576,1.13230612315533,2.83367491172426,1.46127928955656,0.790575555893047,17.9939937196212,4.5420827266646,2.67098405500883,1.46598263418218,9.89820737835213,0,1.94224508923985,0.906970670894253,1.50884063804718,1.47650946440386,0.307435147943927,0.516856586336442,1.09060118843252,0,1.26414703174326,0,0,7.48967132658334,1.98067203434441,5.43306471887569,8.57348140126369,31.0345408873979,22.1177333826567,14.4803138129866,5.78483403317739,0,0,0.220528398054962,0,0,0.120625849856312,0.954978752025092,0.820704498725306,0.582961673259701,21.5093350332191,0,1.23832120777933,0.370389054739423,0,0,0,0,0,0,0.954670618015114,3.32152793260192,1.82987520414164,2.16010681643603,1.88179466413022,1.31017538247707,0.539457385539283,1.1571483801547,1.30877970992015,0.259229946583586,0,0,0.149516546043979,1.15820943319968,1.55560950675238,0.387479470433193,1.01373675294467,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.750729901804728,0.549454872801795,0,0,94.8783095596672,88.8427706458851,91.0903866368641,64.7886497435702,120.574523479633,104.244357839779,124.204140042652,109.428052383486,112.379317428083,98.3744592328458,0.207574695168353,1.99512436700516,2.73173769206615,1.70174701947806,1.25767897576789,2.02227859295016,3.11145418922261,2.88449080134452,3.85103051510178,2.77966932940177,3.29523089857312,2.26351609663291,2.1537546718073,2.17685518176556,2.29741875822453,2.38146845641537,3.01299247456624,3.27945674788299,4.53294490883637,4.71036544430071,3.08582327146874,1.77475806159337,2.14592570952589,1.59881058295561,3.19971893412124,2.28459441307527,1.82927972872773,2.89376682581627,3.12349461845482,2.80571135828869,3.55905054372522,2.9551344712669,1.63692417267876,2.63392630016142,2.70069255373598,7.99393849401427,3.50897412668113,1.50409737833809,1.14772999241306,1.10295709559758,0.695603506861264
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.351796553718,0,0,0.159992422793407,0,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,7.40587370980846,8.23980824558033,0,0,0,0,0,0.299600110518405,0.384218305321555,1.97010263386108,3.64516033495565,1.89292465216244,10.2834354385369,8.1721360152097,4.65465037016825,4.2172007248024,1.83843757322004,18.7196997698961,27.4527776883154,23.8090126547177,8.30883612700221,10.7040543014819,9.89735404057844,17.8677119360884,20.8222165711722,20.6277634498694,10.9012576625257,8.54230084794618,6.15118171223492,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0.845060518660083,0,0,0,0,0,0,1.25602267690966,0,1.03909497345377,2.60227990149204,1.21786191324856,0.922461989024234,1.50722640552623,1.76383060703557,0.879666139307728,0,0.578397427679647,0,0,0,0,0,130.58023546715,125.45857738126,0.255457055208591,0,0,0,33.7028938660851,93.7876235778184,26.0104508873629,76.1350522442171,90.7789873522673,43.6354893575076,67.4923654361872,0.712875546952214,0.124406970610093,0,0.841767423545896,0.260240885925407,0.229902104433473,0.360124259610698,1.05493372485001,0.476255494059295,0.768682321709099,1.3118241438362,2.32833033665114,0,0,0,0.43839146485515,0,0,0.61734640922383,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0.219550115291051,0,96.5230863909344,16.0531195311684,0,0,1.06644125267617,0.696710015581316,0.644337306610467,1.4117846723634,0.444756087689741,0.951128130562796,0,0.494096864172033,0.502670417600539,0.994782360205754,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0.589676985339609,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,2.4633883530163,0.651859905768103,0.848725428875941,0.704070744865506,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,18.7844190285717,18.0505997351993,0,0.504941854408746,0.315508219416257,1.17131623288992,0.430846795465598,0.716906393857656,0.891194696329576,1.13230612315533,2.83367491172426,1.46127928955656,0.790575555893047,17.9939937196212,4.5420827266646,2.67098405500883,1.46598263418218,9.89820737835213,0,1.94224508923985,0.906970670894253,1.50884063804718,1.47650946440386,0.307435147943927,0.516856586336442,1.09060118843252,0,1.26414703174326,0,0,7.48967132658334,1.98067203434441,5.43306471887569,8.57348140126369,31.0345408873979,22.1177333826567,14.4803138129866,5.78483403317739,0,0,0.220528398054962,0,0,0.120625849856312,0.954978752025092,0.820704498725306,0.582961673259701,21.5093350332191,0,1.23832120777933,0.370389054739423,0,0,0,0,0,0,0.954670618015114,3.32152793260192,1.82987520414164,2.16010681643603,1.88179466413022,1.31017538247707,0.539457385539283,1.1571483801547,1.30877970992015,0.259229946583586,0,0,0.149516546043979,1.15820943319968,1.55560950675238,0.387479470433193,1.01373675294467,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.750729901804728,0.549454872801795,0,0,94.8783095596672,88.8427706458851,91.0903866368641,64.7886497435702,120.574523479633,104.244357839779,124.204140042652,109.428052383486,112.379317428083,98.3744592328458,0.207574695168353,1.99512436700516,2.73173769206615,1.70174701947806,1.25767897576789,2.02227859295016,3.11145418922261,2.88449080134452,3.85103051510178,2.77966932940177,3.29523089857312,2.26351609663291,2.1537546718073,2.17685518176556,2.29741875822453,2.38146845641537,3.01299247456624,3.27945674788299,4.53294490883637,4.71036544430071,3.08582327146874,1.77475806159337,2.14592570952589,1.59881058295561,3.19971893412124,2.28459441307527,1.82927972872773,2.89376682581627,3.12349461845482,2.80571135828869,3.55905054372522,2.9551344712669,1.63692417267876,2.63392630016142,2.70069255373598,7.99393849401427,3.50897412668113,1.50409737833809,1.14772999241306,1.10295709559758,0.695603506861264
|short_description=p1@Rnf112
}}
}}

Latest revision as of 20:30, 1 October 2015

Short description:p1@Rnf112
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf112_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000130648, ENSMUST00000136966_5end
EntrezGene:Rnf112
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rnf112

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.31
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.87
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2130.58
cerebellum, neonate N30.CNhs11135.1395-42I2125.46
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A433.70
corpus striatum, adult.CNhs10487.19-21D893.79
corpus striatum, neonate N00.CNhs11226.630-43F126.01
cortex, adult.CNhs10473.12-14D576.14
cortex, neonate N30.CNhs11107.1392-42F290.78
diencephalon, adult.CNhs10482.20-12F243.64
diencephalon, neonate N30.CNhs11201.1388-42B267.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E896.52
hippocampus, neonate N00.CNhs11228.627-43G116.05
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C218.78
medulla oblongata, neonate N30.CNhs11200.1396-42A318.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G69.90
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A58.57
pituitary gland, embryo E15.CNhs10592.427-16B931.03
pituitary gland, embryo E16.CNhs11036.449-43F622.12
pituitary gland, embryo E17.CNhs11039.1265-44F514.48
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C921.51
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A194.88
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A288.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A391.09
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D764.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4120.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5104.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6124.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7109.43
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8112.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A998.37
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I57.99
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.67e-1523
neuroblast (sensu Vertebrata)9.67e-1523
neuron1.57e-1133
neuronal stem cell1.57e-1133
neuroblast1.57e-1133
electrically signaling cell1.57e-1133
electrically responsive cell2.54e-0839
electrically active cell2.54e-0839
neural cell9.50e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.97e-3454
neural tube2.39e-3252
neural rod2.39e-3252
future spinal cord2.39e-3252
neural keel2.39e-3252
central nervous system3.89e-3173
nervous system1.21e-2975
brain1.15e-2847
future brain1.15e-2847
regional part of brain7.27e-2846
anterior neural tube2.80e-2640
neurectoderm3.78e-2664
neural plate3.78e-2664
presumptive neural plate3.78e-2664
regional part of forebrain2.13e-2539
forebrain2.13e-2539
future forebrain2.13e-2539
gray matter8.81e-2234
pre-chordal neural plate2.44e-2149
ecto-epithelium4.11e-2173
ectoderm-derived structure1.35e-2095
ectoderm1.35e-2095
presumptive ectoderm1.35e-2095
brain grey matter1.86e-1829
regional part of telencephalon1.86e-1829
telencephalon1.86e-1829
structure with developmental contribution from neural crest8.86e-1692
cerebral cortex1.43e-1221
cerebral hemisphere1.43e-1221
pallium1.43e-1221
regional part of cerebral cortex8.69e-1117
occipital lobe1.87e-1010
visual cortex1.87e-1010
neocortex1.87e-1010
diencephalon8.98e-0810
future diencephalon8.98e-0810
basal ganglion3.63e-078
nuclear complex of neuraxis3.63e-078
aggregate regional part of brain3.63e-078
collection of basal ganglia3.63e-078
cerebral subcortex3.63e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:61267423..61267484,-&oldid=4320888"