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FFCP PHASE1:Mm9::chr17:56279812..56279831,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:56279812..56279831,-
|DHSsupport=NA
|short_description=p4@Sema6b
|DPIdataset=NA
|description=CAGE_peak_4_at_Sema6b_5end
|association_with_transcript=-46bp_to_ENSMUST00000001256,NM_001130456,uc008dbe.1_5end
|EntrezGene=20359
|EntrezGene=20359
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=O54951,Q3UTK5
|UniProt=O54951,Q3UTK5
|association_with_transcript=-46bp_to_ENSMUST00000001256,NM_001130456,uc008dbe.1_5end
|cluster_id=chr17:56279812..56279831,-
|description=CAGE_peak_4_at_Sema6b_5end
|id=chr17:56279812..56279831,-
|ontology_enrichment_celltype=CL:0000117!1.10e-17!23;CL:0000337!1.10e-17!23;CL:0000221!9.00e-12!44;CL:0000133!9.00e-12!44;CL:0000540!1.40e-11!33;CL:0000047!1.40e-11!33;CL:0000031!1.40e-11!33;CL:0000404!1.40e-11!33;CL:0002319!2.30e-11!43;CL:0000393!4.35e-09!39;CL:0000211!4.35e-09!39;CL:0000055!7.46e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,8.96e-37,23;CL:0000337,8.96e-37,23;CL:0000540,1.49e-25,33;CL:0000047,1.49e-25,33;CL:0000031,1.49e-25,33;CL:0000404,1.49e-25,33;CL:0000393,1.50e-20,39;CL:0000211,1.50e-20,39;CL:0002319,1.53e-19,43;CL:0000221,6.15e-19,44;CL:0000133,6.15e-19,44;CL:0002321,2.24e-09,70;CL:0002609,9.59e-09,6;CL:0002614,9.38e-07,3;CL:0002610,9.78e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.30e-28!73;UBERON:0005743!3.30e-28!73;UBERON:0000073!3.61e-28!75;UBERON:0001016!3.61e-28!75;UBERON:0001049!1.82e-27!52;UBERON:0005068!1.82e-27!52;UBERON:0006241!1.82e-27!52;UBERON:0007135!1.82e-27!52;UBERON:0000955!6.03e-26!50;UBERON:0006238!6.03e-26!50;UBERON:0002616!2.42e-25!49;UBERON:0002020!3.01e-24!34;UBERON:0000033!1.04e-23!63;UBERON:0002346!1.50e-22!71;UBERON:0003075!1.50e-22!71;UBERON:0007284!1.50e-22!71;UBERON:0003080!2.39e-22!40;UBERON:0004121!8.86e-22!102;UBERON:0000924!8.86e-22!102;UBERON:0006601!8.86e-22!102;UBERON:0002780!1.13e-21!39;UBERON:0001890!1.13e-21!39;UBERON:0006240!1.13e-21!39;UBERON:0003056!1.86e-20!49;UBERON:0002791!2.73e-20!29;UBERON:0003528!2.73e-20!29;UBERON:0001893!2.73e-20!29;UBERON:0007811!1.57e-14!86;UBERON:0000956!2.72e-14!21;UBERON:0001869!2.72e-14!21;UBERON:0000203!2.72e-14!21;UBERON:0000153!1.47e-13!94;UBERON:0002619!4.96e-12!17;UBERON:0002021!3.21e-08!10;UBERON:0000411!3.21e-08!10;UBERON:0001950!3.21e-08!10;UBERON:0002420!3.44e-07!8;UBERON:0007245!3.44e-07!8;UBERON:0010009!3.44e-07!8;UBERON:0010011!3.44e-07!8;UBERON:0000454!3.44e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.42e-48,54;UBERON:0001017,3.15e-47,73;UBERON:0002020,8.95e-46,34;UBERON:0001016,1.18e-45,75;UBERON:0001049,4.62e-44,52;UBERON:0005068,4.62e-44,52;UBERON:0006241,4.62e-44,52;UBERON:0007135,4.62e-44,52;UBERON:0003528,3.14e-37,29;UBERON:0002791,3.14e-37,29;UBERON:0001893,3.14e-37,29;UBERON:0000955,8.77e-36,47;UBERON:0006238,8.77e-36,47;UBERON:0002616,1.42e-34,46;UBERON:0002346,8.15e-34,64;UBERON:0003075,8.15e-34,64;UBERON:0007284,8.15e-34,64;UBERON:0004121,1.48e-33,95;UBERON:0000924,1.48e-33,95;UBERON:0006601,1.48e-33,95;UBERON:0003080,1.40e-31,40;UBERON:0002780,3.18e-30,39;UBERON:0001890,3.18e-30,39;UBERON:0006240,3.18e-30,39;UBERON:0010371,6.64e-30,73;UBERON:0000956,2.31e-24,21;UBERON:0001869,2.31e-24,21;UBERON:0000203,2.31e-24,21;UBERON:0003056,3.13e-24,49;UBERON:0010314,1.59e-21,92;UBERON:0002619,1.87e-19,17;UBERON:0002021,4.51e-16,10;UBERON:0000411,4.51e-16,10;UBERON:0001950,4.51e-16,10;UBERON:0000025,2.09e-14,114;UBERON:0002420,7.76e-14,8;UBERON:0007245,7.76e-14,8;UBERON:0010009,7.76e-14,8;UBERON:0010011,7.76e-14,8;UBERON:0000454,7.76e-14,8;UBERON:0004111,1.20e-13,122;UBERON:0003076,3.28e-12,12;UBERON:0003057,3.28e-12,12;UBERON:0002240,1.30e-10,6;UBERON:0005174,1.30e-10,6;UBERON:0001137,1.30e-10,6;UBERON:0011216,2.35e-10,194;UBERON:0001948,2.07e-09,5;UBERON:0002315,2.07e-09,5;UBERON:0000369,1.09e-08,5;UBERON:0002435,1.09e-08,5;UBERON:0000204,1.09e-08,5;UBERON:0010082,1.09e-08,5;UBERON:0002950,5.00e-08,4;UBERON:0001891,5.00e-08,4;UBERON:0009616,5.00e-08,4;UBERON:0010286,5.00e-08,4;UBERON:0002038,9.38e-07,3;UBERON:0009663,9.38e-07,3;UBERON:0009661,9.38e-07,3;UBERON:0000125,9.38e-07,3;UBERON:0002308,9.38e-07,3;UBERON:0004684,9.78e-07,3;UBERON:0002275,9.78e-07,3
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.10556277196391,0.0992909512008853,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.878744730937887,0.972149495371417,0.419959264876088,0,0,0,0,0,0,0,7.08107613008592,6.87688273053643,11.4089652631112,0,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,2.69592992002042,1.75507719831198,1.47227472945967,6.28432165688368,9.49734726091938,2.57230678351403,2.01275489138296,7.35375029288017,9.91042928994498,8.81042632787795,7.21950706304344,5.93488294785872,5.76372154695181,4.68822033501084,7.2587579740359,10.6924895906019,8.25110537994775,7.07108605136802,6.97621235915604,6.33758115806022,0.151452386666368,0.151143120213571,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0.323533699894818,0,0,0,1.46390398505774,3.56059401582874,0,0,0,0,4.19413790333504,2.74500361691176,7.53926112677186,5.38855392596057,6.39288643325826,5.194701113989,4.05603157669394,0,0.124406970610093,0,0,0.130120442962704,0,0,0.30140963567143,0.272145996605311,0.768682321709099,0.374806898238915,0.258703370739016,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,2.94405927989778,4.32199371992995,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0.246794327843601,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,2.56880943980467,2.22702204525186,0,0.252470927204373,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0,1.92792789853084,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0.857348140126369,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,3.33765543618917,0,0,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0,0.13020438484395,0.314578033277133,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,6.7770221114048,7.36520378411483,4.58316410751517,7.73339320546594,4.11049511862385,2.2661816921691,7.42524750254986,4.5032120322422,6.34399372577886,4.65984280576638,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0.419226325255965,0.735374033800057,0.44449345560323,0.412070114477788,0.962757628775446,0.252697211763798,0.50695859978048,0.943131706930381,0.280924522409647,0.576226371643824,0.746661096422973,1.42888107384922,0.695305955669133,0.77163688185482,0.824171801606613,0.441596760403192,0.685738504770831,0.177475806159338,0.476872379894642,0.726732083161643,0.470546902076653,0.507687647350059,0.365855945745545,0.789209134313529,0.814824683075171,0.561142271657738,0.949080144993393,1.18205378850676,0.409231043169689,1.39443157067369,0.578719832943424,3.74715866906919,0.935726433781634,1.07435527024149,0.765153328275374,0.220591419119515,0
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.10556277196391,0.0992909512008853,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.878744730937887,0.972149495371417,0.419959264876088,0,0,0,0,0,0,0,7.08107613008592,6.87688273053643,11.4089652631112,0,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,2.69592992002042,1.75507719831198,1.47227472945967,6.28432165688368,9.49734726091938,2.57230678351403,2.01275489138296,7.35375029288017,9.91042928994498,8.81042632787795,7.21950706304344,5.93488294785872,5.76372154695181,4.68822033501084,7.2587579740359,10.6924895906019,8.25110537994775,7.07108605136802,6.97621235915604,6.33758115806022,0.151452386666368,0.151143120213571,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0.323533699894818,0,0,0,1.46390398505774,3.56059401582874,0,0,0,0,4.19413790333504,2.74500361691176,7.53926112677186,5.38855392596057,6.39288643325826,5.194701113989,4.05603157669394,0,0.124406970610093,0,0,0.130120442962704,0,0,0.30140963567143,0.272145996605311,0.768682321709099,0.374806898238915,0.258703370739016,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,2.94405927989778,4.32199371992995,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0.246794327843601,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,2.56880943980467,2.22702204525186,0,0.252470927204373,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0,1.92792789853084,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0.857348140126369,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,3.33765543618917,0,0,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0,0.13020438484395,0.314578033277133,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,6.7770221114048,7.36520378411483,4.58316410751517,7.73339320546594,4.11049511862385,2.2661816921691,7.42524750254986,4.5032120322422,6.34399372577886,4.65984280576638,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0.419226325255965,0.735374033800057,0.44449345560323,0.412070114477788,0.962757628775446,0.252697211763798,0.50695859978048,0.943131706930381,0.280924522409647,0.576226371643824,0.746661096422973,1.42888107384922,0.695305955669133,0.77163688185482,0.824171801606613,0.441596760403192,0.685738504770831,0.177475806159338,0.476872379894642,0.726732083161643,0.470546902076653,0.507687647350059,0.365855945745545,0.789209134313529,0.814824683075171,0.561142271657738,0.949080144993393,1.18205378850676,0.409231043169689,1.39443157067369,0.578719832943424,3.74715866906919,0.935726433781634,1.07435527024149,0.765153328275374,0.220591419119515,0
|short_description=p4@Sema6b
}}
}}

Latest revision as of 16:59, 26 September 2015

Short description:p4@Sema6b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sema6b_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -46bp_to_ENSMUST00000001256, NM_001130456, uc008dbe.1_5end
EntrezGene:Sema6b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sema6b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.42e-4854
central nervous system3.15e-4773
gray matter8.95e-4634
nervous system1.18e-4575
neural tube4.62e-4452
neural rod4.62e-4452
future spinal cord4.62e-4452
neural keel4.62e-4452
brain grey matter3.14e-3729
regional part of telencephalon3.14e-3729
telencephalon3.14e-3729
brain8.77e-3647
future brain8.77e-3647
regional part of brain1.42e-3446
neurectoderm8.15e-3464
neural plate8.15e-3464
presumptive neural plate8.15e-3464
ectoderm-derived structure1.48e-3395
ectoderm1.48e-3395
presumptive ectoderm1.48e-3395
anterior neural tube1.40e-3140
regional part of forebrain3.18e-3039
forebrain3.18e-3039
future forebrain3.18e-3039
ecto-epithelium6.64e-3073
cerebral cortex2.31e-2421
cerebral hemisphere2.31e-2421
pallium2.31e-2421
pre-chordal neural plate3.13e-2449
structure with developmental contribution from neural crest1.59e-2192
regional part of cerebral cortex1.87e-1917
occipital lobe4.51e-1610
visual cortex4.51e-1610
neocortex4.51e-1610
tube2.09e-14114
basal ganglion7.76e-148
nuclear complex of neuraxis7.76e-148
aggregate regional part of brain7.76e-148
collection of basal ganglia7.76e-148
cerebral subcortex7.76e-148
anatomical conduit1.20e-13122
posterior neural tube3.28e-1212
chordal neural plate3.28e-1212
spinal cord1.30e-106
dorsal region element1.30e-106
dorsum1.30e-106
organ system subdivision2.35e-10194
regional part of spinal cord2.07e-095
gray matter of spinal cord2.07e-095
corpus striatum1.09e-085
striatum1.09e-085
ventral part of telencephalon1.09e-085
future corpus striatum1.09e-085
regional part of midbrain5.00e-084
midbrain5.00e-084
presumptive midbrain5.00e-084
midbrain neural tube5.00e-084
substantia nigra9.38e-073
telencephalic nucleus9.38e-073
midbrain nucleus9.38e-073
neural nucleus9.38e-073
nucleus of brain9.38e-073
raphe nuclei9.78e-073
reticular formation9.78e-073
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