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FFCP PHASE1:Mm9::chr18:31476697..31476782,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:31476697..31476782,-
|DHSsupport=NA
|short_description=p1@Rit2
|DPIdataset=NA
|description=CAGE_peak_1_at_Rit2_5end
|association_with_transcript=0bp_to_ENSMUST00000139924,NM_009065,uc008ehx.1,uc012bas.1_5end
|EntrezGene=19762
|EntrezGene=19762
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=F2Z432,P70425
|UniProt=F2Z432,P70425
|association_with_transcript=0bp_to_ENSMUST00000139924,NM_009065,uc008ehx.1,uc012bas.1_5end
|cluster_id=chr18:31476697..31476782,-
|description=CAGE_peak_1_at_Rit2_5end
|id=chr18:31476697..31476782,-
|ontology_enrichment_celltype=CL:0000540!1.72e-11!33;CL:0000047!1.72e-11!33;CL:0000031!1.72e-11!33;CL:0000404!1.72e-11!33;CL:0000117!7.43e-11!23;CL:0000337!7.43e-11!23;CL:0002319!5.65e-09!43;CL:0000221!7.16e-09!44;CL:0000133!7.16e-09!44;CL:0000393!1.09e-07!39;CL:0000211!1.09e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-10,23;CL:0000337,2.61e-10,23;CL:0000540,7.85e-10,33;CL:0000047,7.85e-10,33;CL:0000031,7.85e-10,33;CL:0000404,7.85e-10,33;CL:0000393,6.23e-07,39;CL:0000211,6.23e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!7.22e-31!71;UBERON:0003075!7.22e-31!71;UBERON:0007284!7.22e-31!71;UBERON:0001017!1.92e-27!73;UBERON:0005743!1.92e-27!73;UBERON:0000073!2.29e-27!75;UBERON:0001016!2.29e-27!75;UBERON:0004121!3.09e-27!102;UBERON:0000924!3.09e-27!102;UBERON:0006601!3.09e-27!102;UBERON:0000033!1.57e-24!63;UBERON:0001049!1.10e-23!52;UBERON:0005068!1.10e-23!52;UBERON:0006241!1.10e-23!52;UBERON:0007135!1.10e-23!52;UBERON:0000955!1.32e-22!50;UBERON:0006238!1.32e-22!50;UBERON:0002616!5.96e-22!49;UBERON:0003056!2.57e-20!49;UBERON:0003080!2.29e-17!40;UBERON:0002780!1.39e-16!39;UBERON:0001890!1.39e-16!39;UBERON:0006240!1.39e-16!39;UBERON:0002020!1.50e-15!34;UBERON:0002791!1.21e-12!29;UBERON:0003528!1.21e-12!29;UBERON:0001893!1.21e-12!29;UBERON:0000153!9.31e-12!94;UBERON:0007811!2.55e-11!86;UBERON:0000956!6.95e-08!21;UBERON:0001869!6.95e-08!21;UBERON:0000203!6.95e-08!21;UBERON:0002021!7.57e-08!10;UBERON:0000411!7.57e-08!10;UBERON:0001950!7.57e-08!10;UBERON:0002619!1.73e-07!17;UBERON:0003076!5.91e-07!12;UBERON:0003057!5.91e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.86e-28,64;UBERON:0003075,6.86e-28,64;UBERON:0007284,6.86e-28,64;UBERON:0001017,5.26e-25,73;UBERON:0000073,1.27e-24,54;UBERON:0001016,1.87e-24,75;UBERON:0001049,5.64e-23,52;UBERON:0005068,5.64e-23,52;UBERON:0006241,5.64e-23,52;UBERON:0007135,5.64e-23,52;UBERON:0010371,2.46e-22,73;UBERON:0004121,4.76e-22,95;UBERON:0000924,4.76e-22,95;UBERON:0006601,4.76e-22,95;UBERON:0003056,1.73e-20,49;UBERON:0000955,2.77e-19,47;UBERON:0006238,2.77e-19,47;UBERON:0010314,5.02e-19,92;UBERON:0002616,1.43e-18,46;UBERON:0003080,5.02e-17,40;UBERON:0002780,3.74e-16,39;UBERON:0001890,3.74e-16,39;UBERON:0006240,3.74e-16,39;UBERON:0002020,1.96e-15,34;UBERON:0003528,3.84e-12,29;UBERON:0002791,3.84e-12,29;UBERON:0001893,3.84e-12,29;UBERON:0002021,5.84e-09,10;UBERON:0000411,5.84e-09,10;UBERON:0001950,5.84e-09,10;UBERON:0002619,1.62e-07,17;UBERON:0002420,3.23e-07,8;UBERON:0007245,3.23e-07,8;UBERON:0010009,3.23e-07,8;UBERON:0010011,3.23e-07,8;UBERON:0000454,3.23e-07,8;UBERON:0000956,6.89e-07,21;UBERON:0001869,6.89e-07,21;UBERON:0000203,6.89e-07,21
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1962987294292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,20.2316460859598,28.0365219014177,20.2826049121977,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0.518448061542388,0.810035629990144,1.26194976810829,50.5602242394732,56.1006094017098,2.69479758272899,1.72521847832825,0.919218786610021,104.610086949419,84.1459557981387,92.9319526200273,21.2336923245612,29.0930706655663,25.5247551572812,104.414441626516,128.309875087223,102.833220753793,45.0781735774712,41.7149024741372,31.5015063444758,0.37863096666592,1.28471652181535,0,0,0,0.539703191637817,0,0,5.33688796500657,0,0,0,0.281686839553361,0,0,0,0,0,0,3.65388415100992,0,18.7037095221679,4.3371331691534,11.2652226975492,4.61230994512117,10.5505848386836,10.1126288136706,4.64966387919799,0,1.44599356919912,0,0,0,0.484875253135222,0,61.1911865754134,41.4704479490641,1.27728527604296,0,0,0,178.999814088763,102.937635634191,21.9895116197513,90.3886464999838,73.6460517111352,145.036055102573,101.725271943484,0.101839363850316,0,0,20.412860020988,1.30120442962704,1.83921683546778,5.22180176435513,4.67184935290717,7.96027040070536,8.71173297936978,9.46387418053261,49.92975055263,0.215567992932842,2.26927296201383,4.57472922826267,1.53437012699302,2.22437799380478,1.39300866608867,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,105.565554179192,22.8448239482011,0,1.05780226665418,0.426576501070468,0.232236671860439,0.902072229254653,1.00841762311671,0.444756087689741,0.760902504450237,0.474529061544512,0.988193728344065,1.00534083520108,2.18852119245266,2.72949721966768,0,1.72910439899755,1.7922714592893,0.569003702859245,1.37098215131675,0,1.01825663922657,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,164.724905327475,125.885351400026,0,0,4.10160685241134,3.90438744296638,12.4945570685023,0.238968797952552,0.445597348164788,0.566153061577665,1.61924280669958,4.9683495844923,2.37172666767914,58.8018009051907,0.141940085208269,0.35613120733451,0,0,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,164.091889973326,0.36012218806262,2.58717367565509,4.07240366560025,5.32020700926821,11.4156043265325,14.1512157717824,19.4857567433344,0,0,5.51320995137405,0,0,0,0,0,1.7488850197791,135.175045165662,0,0,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,0.406638934253697,0.648032044930808,1.25452977608681,1.09181281873089,1.88810084938749,1.81837602595739,1.04702376793612,0.777689839750757,0,0.56369293868419,0,0,0.388902376688095,0.387479470433193,0.675824501963113,0,0,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,2.89784391048286,0,1.83151624267265,0.214368379079066,0,79.0652579663893,80.0965911522488,74.4764167471216,70.975364307943,80.8397373329358,72.5178141494113,77.6275875266577,84.6603862061534,91.9879090237935,90.6080545565685,0.726511433089237,3.19219898720825,2.90247129782028,6.80698807791223,7.33646069197938,5.88299227040045,8.88986911206461,8.65347240403356,14.1204452220399,8.33900798820532,10.8996098952803,11.5062068245506,9.27050923951836,7.49094283136971,7.86865924691902,10.9547548995107,8.69132444586416,7.33055037762079,4.94503080963968,10.1567254892734,9.25746981440622,6.92155644021416,6.91464950847231,7.99405291477807,8.56395361779509,7.61531471025089,10.6098224266208,9.47050961176234,5.56796866768033,7.2948495315506,7.82991119619549,7.48634066054282,8.59385190656348,9.76102099471586,4.24394544158511,11.9909077410214,8.65546951248011,5.80151845930405,4.01705497344571,3.30887128679273,3.01428186306548
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1962987294292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,20.2316460859598,28.0365219014177,20.2826049121977,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0.518448061542388,0.810035629990144,1.26194976810829,50.5602242394732,56.1006094017098,2.69479758272899,1.72521847832825,0.919218786610021,104.610086949419,84.1459557981387,92.9319526200273,21.2336923245612,29.0930706655663,25.5247551572812,104.414441626516,128.309875087223,102.833220753793,45.0781735774712,41.7149024741372,31.5015063444758,0.37863096666592,1.28471652181535,0,0,0,0.539703191637817,0,0,5.33688796500657,0,0,0,0.281686839553361,0,0,0,0,0,0,3.65388415100992,0,18.7037095221679,4.3371331691534,11.2652226975492,4.61230994512117,10.5505848386836,10.1126288136706,4.64966387919799,0,1.44599356919912,0,0,0,0.484875253135222,0,61.1911865754134,41.4704479490641,1.27728527604296,0,0,0,178.999814088763,102.937635634191,21.9895116197513,90.3886464999838,73.6460517111352,145.036055102573,101.725271943484,0.101839363850316,0,0,20.412860020988,1.30120442962704,1.83921683546778,5.22180176435513,4.67184935290717,7.96027040070536,8.71173297936978,9.46387418053261,49.92975055263,0.215567992932842,2.26927296201383,4.57472922826267,1.53437012699302,2.22437799380478,1.39300866608867,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,105.565554179192,22.8448239482011,0,1.05780226665418,0.426576501070468,0.232236671860439,0.902072229254653,1.00841762311671,0.444756087689741,0.760902504450237,0.474529061544512,0.988193728344065,1.00534083520108,2.18852119245266,2.72949721966768,0,1.72910439899755,1.7922714592893,0.569003702859245,1.37098215131675,0,1.01825663922657,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,164.724905327475,125.885351400026,0,0,4.10160685241134,3.90438744296638,12.4945570685023,0.238968797952552,0.445597348164788,0.566153061577665,1.61924280669958,4.9683495844923,2.37172666767914,58.8018009051907,0.141940085208269,0.35613120733451,0,0,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,164.091889973326,0.36012218806262,2.58717367565509,4.07240366560025,5.32020700926821,11.4156043265325,14.1512157717824,19.4857567433344,0,0,5.51320995137405,0,0,0,0,0,1.7488850197791,135.175045165662,0,0,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,0.406638934253697,0.648032044930808,1.25452977608681,1.09181281873089,1.88810084938749,1.81837602595739,1.04702376793612,0.777689839750757,0,0.56369293868419,0,0,0.388902376688095,0.387479470433193,0.675824501963113,0,0,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,2.89784391048286,0,1.83151624267265,0.214368379079066,0,79.0652579663893,80.0965911522488,74.4764167471216,70.975364307943,80.8397373329358,72.5178141494113,77.6275875266577,84.6603862061534,91.9879090237935,90.6080545565685,0.726511433089237,3.19219898720825,2.90247129782028,6.80698807791223,7.33646069197938,5.88299227040045,8.88986911206461,8.65347240403356,14.1204452220399,8.33900798820532,10.8996098952803,11.5062068245506,9.27050923951836,7.49094283136971,7.86865924691902,10.9547548995107,8.69132444586416,7.33055037762079,4.94503080963968,10.1567254892734,9.25746981440622,6.92155644021416,6.91464950847231,7.99405291477807,8.56395361779509,7.61531471025089,10.6098224266208,9.47050961176234,5.56796866768033,7.2948495315506,7.82991119619549,7.48634066054282,8.59385190656348,9.76102099471586,4.24394544158511,11.9909077410214,8.65546951248011,5.80151845930405,4.01705497344571,3.30887128679273,3.01428186306548
|short_description=p1@Rit2
}}
}}

Latest revision as of 03:16, 27 September 2015

Short description:p1@Rit2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rit2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000139924, NM_009065, uc008ehx.1, uc012bas.1_5end
EntrezGene:Rit2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rit2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C320.23
Mouse Granule cells, donor2.CNhs12357.11731-123E328.04
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F150.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D556.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3104.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F384.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D792.93
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4104.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5128.31
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6102.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D645.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F641.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.50
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D718.70
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D611.27
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F510.55
adrenal gland, neonate N00.CNhs11191.1311-23C110.11
adrenal gland, neonate N25.CNhs11223.1377-27I34.65
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B261.19
cerebellum, neonate N30.CNhs11135.1395-42I241.47
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4179.00
corpus striatum, adult.CNhs10487.19-21D8102.94
corpus striatum, neonate N00.CNhs11226.630-43F121.99
cortex, adult.CNhs10473.12-14D590.39
cortex, neonate N30.CNhs11107.1392-42F273.65
diencephalon, adult.CNhs10482.20-12F2145.04
diencephalon, neonate N30.CNhs11201.1388-42B2101.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G420.41
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C67.96
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G89.46
eyeball, neonate N16.CNhs11188.777-19A249.93
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8105.57
hippocampus, neonate N00.CNhs11228.627-43G122.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2164.72
medulla oblongata, neonate N30.CNhs11200.1396-42A3125.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.49
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I958.80
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G8164.09
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F611.42
pituitary gland, embryo E17.CNhs11039.1265-44F514.15
pituitary gland, neonate N00.CNhs11190.1308-22E919.49
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C9135.18
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A179.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A280.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A374.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D770.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A480.84
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A572.52
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A677.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A784.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A891.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A990.61
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B38.66
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B43.01





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.61e-1023
neuroblast (sensu Vertebrata)2.61e-1023
neuron7.85e-1033
neuronal stem cell7.85e-1033
neuroblast7.85e-1033
electrically signaling cell7.85e-1033
electrically responsive cell6.23e-0739
electrically active cell6.23e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm6.86e-2864
neural plate6.86e-2864
presumptive neural plate6.86e-2864
central nervous system5.26e-2573
regional part of nervous system1.27e-2454
nervous system1.87e-2475
neural tube5.64e-2352
neural rod5.64e-2352
future spinal cord5.64e-2352
neural keel5.64e-2352
ecto-epithelium2.46e-2273
ectoderm-derived structure4.76e-2295
ectoderm4.76e-2295
presumptive ectoderm4.76e-2295
pre-chordal neural plate1.73e-2049
brain2.77e-1947
future brain2.77e-1947
structure with developmental contribution from neural crest5.02e-1992
regional part of brain1.43e-1846
anterior neural tube5.02e-1740
regional part of forebrain3.74e-1639
forebrain3.74e-1639
future forebrain3.74e-1639
gray matter1.96e-1534
brain grey matter3.84e-1229
regional part of telencephalon3.84e-1229
telencephalon3.84e-1229
occipital lobe5.84e-0910
visual cortex5.84e-0910
neocortex5.84e-0910
regional part of cerebral cortex1.62e-0717
basal ganglion3.23e-078
nuclear complex of neuraxis3.23e-078
aggregate regional part of brain3.23e-078
collection of basal ganglia3.23e-078
cerebral subcortex3.23e-078
cerebral cortex6.89e-0721
cerebral hemisphere6.89e-0721
pallium6.89e-0721
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