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FFCP PHASE1:Mm9::chr2:29980294..29980327,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:29980294..29980327,-
|DHSsupport=NA
|short_description=p3@Zer1
|DPIdataset=NA
|description=CAGE_peak_3_at_Zer1_5end
|association_with_transcript=-189bp_to_ENSMUST00000154231_5end
|EntrezGene=227693
|EntrezGene=227693
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-189bp_to_ENSMUST00000154231_5end
|cluster_id=chr2:29980294..29980327,-
|description=CAGE_peak_3_at_Zer1_5end
|id=chr2:29980294..29980327,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,2.20e-07,23;CL:0000337,2.20e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!5.45e-16!50;UBERON:0006238!5.45e-16!50;UBERON:0002616!2.14e-15!49;UBERON:0001049!2.43e-15!52;UBERON:0005068!2.43e-15!52;UBERON:0006241!2.43e-15!52;UBERON:0007135!2.43e-15!52;UBERON:0000033!3.88e-13!63;UBERON:0002346!6.70e-13!71;UBERON:0003075!6.70e-13!71;UBERON:0007284!6.70e-13!71;UBERON:0001017!8.48e-13!73;UBERON:0005743!8.48e-13!73;UBERON:0000073!2.65e-12!75;UBERON:0001016!2.65e-12!75;UBERON:0004121!4.42e-12!102;UBERON:0000924!4.42e-12!102;UBERON:0006601!4.42e-12!102;UBERON:0003080!4.16e-11!40;UBERON:0002020!1.03e-10!34;UBERON:0002780!1.36e-10!39;UBERON:0001890!1.36e-10!39;UBERON:0006240!1.36e-10!39;UBERON:0002791!1.11e-09!29;UBERON:0003528!1.11e-09!29;UBERON:0001893!1.11e-09!29;UBERON:0002619!1.59e-08!17;UBERON:0003056!1.75e-08!49;UBERON:0002021!3.47e-08!10;UBERON:0000411!3.47e-08!10;UBERON:0001950!3.47e-08!10;UBERON:0007811!1.03e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.19e-25,54;UBERON:0001049,8.44e-23,52;UBERON:0005068,8.44e-23,52;UBERON:0006241,8.44e-23,52;UBERON:0007135,8.44e-23,52;UBERON:0000955,9.86e-21,47;UBERON:0006238,9.86e-21,47;UBERON:0001017,2.85e-20,73;UBERON:0002616,9.10e-20,46;UBERON:0001016,2.47e-19,75;UBERON:0002020,2.29e-17,34;UBERON:0002346,4.13e-16,64;UBERON:0003075,4.13e-16,64;UBERON:0007284,4.13e-16,64;UBERON:0003080,2.24e-15,40;UBERON:0003528,2.69e-15,29;UBERON:0002791,2.69e-15,29;UBERON:0001893,2.69e-15,29;UBERON:0002780,1.58e-14,39;UBERON:0001890,1.58e-14,39;UBERON:0006240,1.58e-14,39;UBERON:0010371,1.98e-13,73;UBERON:0002021,3.92e-13,10;UBERON:0000411,3.92e-13,10;UBERON:0001950,3.92e-13,10;UBERON:0004121,5.60e-13,95;UBERON:0000924,5.60e-13,95;UBERON:0006601,5.60e-13,95;UBERON:0010314,1.39e-11,92;UBERON:0002619,6.74e-11,17;UBERON:0003056,6.96e-11,49;UBERON:0000956,1.46e-09,21;UBERON:0001869,1.46e-09,21;UBERON:0000203,1.46e-09,21;UBERON:0000025,2.05e-08,114;UBERON:0003076,2.78e-08,12;UBERON:0003057,2.78e-08,12;UBERON:0004111,4.97e-08,122;UBERON:0002420,2.66e-07,8;UBERON:0007245,2.66e-07,8;UBERON:0010009,2.66e-07,8;UBERON:0010011,2.66e-07,8;UBERON:0000454,2.66e-07,8
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0.34243593645101,0.0797721589953364,0.342401459862411,0.34968160967599,1.99865857089398,1.82227740650843,4.19737126876888,0.473193248037357,0.137114433605739,0,2.38121212422995,1.19149141441062,0.522399578277871,0.159992422793407,0.45881856213434,0.57423196411502,0,0,0,0.252030129759931,0.221730510655305,2.54012269383853,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,1.0470474879476,1.76469446409304,1.36609096991689,0.971020706062307,0.251793635951155,1.01376931219515,0.367093504323363,2.34717403304412,1.09012578190223,2.19686182734472,0.777719596297134,0.699932108126813,0,0.838913030288682,0,2.68875039313971,0.257259436035947,0.573066879877513,1.03134418455488,1.01158230429799,1.5869729378161,0.633831403506179,0.677689064138264,1.77858959222228,0,0,0,2.09720077362883,0.384218305321555,0.103689612308478,0,0,1.71390590642282,1.54607978666129,0.489963196859816,0.383381884072945,1.83843757322004,5.50579404996943,2.42605942361857,3.84016333140609,1.05509030184155,1.00636407962651,1.56274011167028,2.51264699101243,3.37657566019008,3.36156145108982,2.65165726926301,1.85083185038834,0.186399445825301,0.227178579999552,0.377857800533928,0.289864488701678,0,0,0,0,0,0.842666520790511,0.340860645156116,0.259786004602869,1.06001872353102,1.26759077799012,0,0,0,0,0.253359865475099,0,0.5709193985953,0.517875767294343,1.03909497345377,0.520455980298408,2.13125834818499,1.61430848079241,0.904335843315735,1.99900802130698,0.628332956648377,0.741584903203122,0.144599356919912,0,0.485300549842228,0.662524555381181,0.969750506270444,0,2.04946557908083,2.30391377494801,0,3.59445373517761,1.19980546198682,3.04968544975355,3.14560342750128,14.1825186873774,2.1361239859187,14.2535942557667,11.7629110371952,4.36354893575076,7.78758062725237,0.305518091550949,1.49288364732112,2.52722758433675,0.631325567659422,0.130120442962704,0,0,0.60281927134286,0.748401490664606,0.384341160854549,0.187403449119458,0.517406741478031,0.215567992932842,0.189106080167819,0,0.43839146485515,0,1.39300866608867,0.205782136407943,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.467061369468678,0.16455984991348,0,0.486412857275134,0.146199987425332,0,0.402619256281115,14.7202963994889,0.720332286654991,0,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0,0.164698954724011,0,0.795825888164603,0.38992817423824,0.898819408654221,0,0,0,0.228497025219458,0,0.610953983535943,0.387904974335251,0.561086559122548,0.442655759869801,0,0.156998727841375,0.370191491765402,0,0.667380422864376,1.37591296579242,0.899448449539415,1.21716072833102,0.964708639009667,1.2731292589071,1.15078454980324,1.13494658742525,0.823684239564244,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0,0.670025029767263,0.952174563544055,0.975668239288994,0.788175720530955,0.664394068946325,0.956728611944923,0.983179888294428,0.172684981865896,0.867894351489069,3.01582567878545,0.54390568381871,0,0.275936746304732,2.24770825982909,2.22702204525186,0.491804836130026,0.757412781613119,0,0,0.861693590931196,0,0,0.283076530788832,0,0,0.395287777946524,5.46246237917072,1.70328102249922,0.712262414669021,1.14020871547503,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,1.70219802876894,0.540183282093931,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,0.493647061806363,3.04464949114599,0.704015124191131,0,0.220528398054962,0.65954501176592,0.968786560175433,0.542816324353403,0.238744688006273,0.820704498725306,0.291480836629851,2.03967832211561,0.341741761595705,1.03193433981611,0.185194527369712,0.941842285023455,1.36694227721025,1.37266903923914,6.28920190977265,6.01791244991729,6.35719879500349,0.954670618015114,0.790839983952838,0.406638934253697,0.756037385752609,1.04544148007234,0,0.539457385539283,1.32245529160537,0,0,0.621339313086926,0,0.299033092087958,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.821500670520278,0.911430693907651,0.209718688851422,0.483168241652012,0,0.632022241256357,0,0.410843828659309,0.51968329191118,0.358053391334963,0.198681354781265,0.240390899039938,0.590758108698309,0.100966449948148,0.685861259894999,0.302478555410522,0.682205165178267,0.192423683280659,0.935015217452552,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,1.15913756419314,1.31377732815827,0.549454872801795,0.857473516316263,0.501572104035363,11.2950368523413,13.3494318587081,10.3121192419091,12.2015759464018,19.8673930733486,18.1294535373528,21.6007200074178,24.3173449741079,19.4851235863208,20.7104124700728,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.962757628775446,0,0.50695859978048,0.188626341386076,0.561849044819294,0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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0.34243593645101,0.0797721589953364,0.342401459862411,0.34968160967599,1.99865857089398,1.82227740650843,4.19737126876888,0.473193248037357,0.137114433605739,0,2.38121212422995,1.19149141441062,0.522399578277871,0.159992422793407,0.45881856213434,0.57423196411502,0,0,0,0.252030129759931,0.221730510655305,2.54012269383853,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,1.0470474879476,1.76469446409304,1.36609096991689,0.971020706062307,0.251793635951155,1.01376931219515,0.367093504323363,2.34717403304412,1.09012578190223,2.19686182734472,0.777719596297134,0.699932108126813,0,0.838913030288682,0,2.68875039313971,0.257259436035947,0.573066879877513,1.03134418455488,1.01158230429799,1.5869729378161,0.633831403506179,0.677689064138264,1.77858959222228,0,0,0,2.09720077362883,0.384218305321555,0.103689612308478,0,0,1.71390590642282,1.54607978666129,0.489963196859816,0.383381884072945,1.83843757322004,5.50579404996943,2.42605942361857,3.84016333140609,1.05509030184155,1.00636407962651,1.56274011167028,2.51264699101243,3.37657566019008,3.36156145108982,2.65165726926301,1.85083185038834,0.186399445825301,0.227178579999552,0.377857800533928,0.289864488701678,0,0,0,0,0,0.842666520790511,0.340860645156116,0.259786004602869,1.06001872353102,1.26759077799012,0,0,0,0,0.253359865475099,0,0.5709193985953,0.517875767294343,1.03909497345377,0.520455980298408,2.13125834818499,1.61430848079241,0.904335843315735,1.99900802130698,0.628332956648377,0.741584903203122,0.144599356919912,0,0.485300549842228,0.662524555381181,0.969750506270444,0,2.04946557908083,2.30391377494801,0,3.59445373517761,1.19980546198682,3.04968544975355,3.14560342750128,14.1825186873774,2.1361239859187,14.2535942557667,11.7629110371952,4.36354893575076,7.78758062725237,0.305518091550949,1.49288364732112,2.52722758433675,0.631325567659422,0.130120442962704,0,0,0.60281927134286,0.748401490664606,0.384341160854549,0.187403449119458,0.517406741478031,0.215567992932842,0.189106080167819,0,0.43839146485515,0,1.39300866608867,0.205782136407943,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.467061369468678,0.16455984991348,0,0.486412857275134,0.146199987425332,0,0.402619256281115,14.7202963994889,0.720332286654991,0,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0,0.164698954724011,0,0.795825888164603,0.38992817423824,0.898819408654221,0,0,0,0.228497025219458,0,0.610953983535943,0.387904974335251,0.561086559122548,0.442655759869801,0,0.156998727841375,0.370191491765402,0,0.667380422864376,1.37591296579242,0.899448449539415,1.21716072833102,0.964708639009667,1.2731292589071,1.15078454980324,1.13494658742525,0.823684239564244,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0,0.670025029767263,0.952174563544055,0.975668239288994,0.788175720530955,0.664394068946325,0.956728611944923,0.983179888294428,0.172684981865896,0.867894351489069,3.01582567878545,0.54390568381871,0,0.275936746304732,2.24770825982909,2.22702204525186,0.491804836130026,0.757412781613119,0,0,0.861693590931196,0,0,0.283076530788832,0,0,0.395287777946524,5.46246237917072,1.70328102249922,0.712262414669021,1.14020871547503,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,1.70219802876894,0.540183282093931,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,0.493647061806363,3.04464949114599,0.704015124191131,0,0.220528398054962,0.65954501176592,0.968786560175433,0.542816324353403,0.238744688006273,0.820704498725306,0.291480836629851,2.03967832211561,0.341741761595705,1.03193433981611,0.185194527369712,0.941842285023455,1.36694227721025,1.37266903923914,6.28920190977265,6.01791244991729,6.35719879500349,0.954670618015114,0.790839983952838,0.406638934253697,0.756037385752609,1.04544148007234,0,0.539457385539283,1.32245529160537,0,0,0.621339313086926,0,0.299033092087958,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.821500670520278,0.911430693907651,0.209718688851422,0.483168241652012,0,0.632022241256357,0,0.410843828659309,0.51968329191118,0.358053391334963,0.198681354781265,0.240390899039938,0.590758108698309,0.100966449948148,0.685861259894999,0.302478555410522,0.682205165178267,0.192423683280659,0.935015217452552,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,1.15913756419314,1.31377732815827,0.549454872801795,0.857473516316263,0.501572104035363,11.2950368523413,13.3494318587081,10.3121192419091,12.2015759464018,19.8673930733486,18.1294535373528,21.6007200074178,24.3173449741079,19.4851235863208,20.7104124700728,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.962757628775446,0,0.50695859978048,0.188626341386076,0.561849044819294,0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|short_description=p3@Zer1
}}
}}

Latest revision as of 12:52, 26 September 2015

Short description:p3@Zer1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Zer1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -189bp_to_ENSMUST00000154231_5end
EntrezGene:Zer1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Zer1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F211.76
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.36
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.71
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.20e-0723
neuroblast (sensu Vertebrata)2.20e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.19e-2554
neural tube8.44e-2352
neural rod8.44e-2352
future spinal cord8.44e-2352
neural keel8.44e-2352
brain9.86e-2147
future brain9.86e-2147
central nervous system2.85e-2073
regional part of brain9.10e-2046
nervous system2.47e-1975
gray matter2.29e-1734
neurectoderm4.13e-1664
neural plate4.13e-1664
presumptive neural plate4.13e-1664
anterior neural tube2.24e-1540
brain grey matter2.69e-1529
regional part of telencephalon2.69e-1529
telencephalon2.69e-1529
regional part of forebrain1.58e-1439
forebrain1.58e-1439
future forebrain1.58e-1439
ecto-epithelium1.98e-1373
occipital lobe3.92e-1310
visual cortex3.92e-1310
neocortex3.92e-1310
ectoderm-derived structure5.60e-1395
ectoderm5.60e-1395
presumptive ectoderm5.60e-1395
structure with developmental contribution from neural crest1.39e-1192
regional part of cerebral cortex6.74e-1117
pre-chordal neural plate6.96e-1149
cerebral cortex1.46e-0921
cerebral hemisphere1.46e-0921
pallium1.46e-0921
tube2.05e-08114
posterior neural tube2.78e-0812
chordal neural plate2.78e-0812
anatomical conduit4.97e-08122
basal ganglion2.66e-078
nuclear complex of neuraxis2.66e-078
aggregate regional part of brain2.66e-078
collection of basal ganglia2.66e-078
cerebral subcortex2.66e-078
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