FFCP PHASE1:Mm9::chr5:136387174..136387192,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:136387174..136387192,- to FFCP PHASE1:Mm9::chr5:136387174..136387192,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=856 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:136387174..136387192,- | |||
|description=CAGE_peak_at_chr5:136387174..136387192,- | |||
|id=chr5:136387174..136387192,- | |||
|ontology_enrichment_celltype=CL:0000055!1.73e-15!50;CL:0002319!3.24e-15!43;CL:0000221!7.20e-15!44;CL:0000133!7.20e-15!44;CL:0000393!8.31e-14!39;CL:0000211!8.31e-14!39;CL:0000117!6.43e-13!23;CL:0000337!6.43e-13!23;CL:0000540!7.78e-13!33;CL:0000047!7.78e-13!33;CL:0000031!7.78e-13!33;CL:0000404!7.78e-13!33;CL:0000034!1.55e-08!97;CL:0000723!2.25e-08!91;CL:0000048!2.25e-08!91;CL:0002321!2.32e-08!70;CL:0000220!2.32e-08!70;CL:0000548!6.95e-08!115;CL:0000004!6.95e-08!115;CL:0000255!6.95e-08!115;CL:0002371!5.38e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-24,23;CL:0000337,1.41e-24,23;CL:0002319,6.95e-16,43;CL:0000540,8.18e-16,33;CL:0000047,8.18e-16,33;CL:0000031,8.18e-16,33;CL:0000404,8.18e-16,33;CL:0000221,2.08e-15,44;CL:0000133,2.08e-15,44;CL:0000393,2.39e-14,39;CL:0000211,2.39e-14,39;CL:0002321,7.54e-09,70;CL:0000723,3.66e-08,91;CL:0000048,3.66e-08,91;CL:0002614,5.85e-08,3;CL:0002612,2.19e-07,3;CL:0000034,2.58e-07,97;CL:0002613,4.34e-07,3;CL:0002092,6.68e-07,3;CL:0002540,6.68e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.50e-23!75;UBERON:0001016!2.50e-23!75;UBERON:0001017!1.05e-22!73;UBERON:0005743!1.05e-22!73;UBERON:0002020!8.49e-18!34;UBERON:0001049!3.84e-17!52;UBERON:0005068!3.84e-17!52;UBERON:0006241!3.84e-17!52;UBERON:0007135!3.84e-17!52;UBERON:0004121!8.52e-16!102;UBERON:0000924!8.52e-16!102;UBERON:0006601!8.52e-16!102;UBERON:0002791!2.65e-14!29;UBERON:0003528!2.65e-14!29;UBERON:0001893!2.65e-14!29;UBERON:0000955!4.28e-14!50;UBERON:0006238!4.28e-14!50;UBERON:0002616!5.77e-14!49;UBERON:0003080!3.17e-13!40;UBERON:0002780!6.04e-13!39;UBERON:0001890!6.04e-13!39;UBERON:0006240!6.04e-13!39;UBERON:0002346!2.03e-12!71;UBERON:0003075!2.03e-12!71;UBERON:0007284!2.03e-12!71;UBERON:0000956!5.34e-11!21;UBERON:0001869!5.34e-11!21;UBERON:0000203!5.34e-11!21;UBERON:0000033!2.23e-10!63;UBERON:0003056!2.38e-10!49;UBERON:0002619!2.88e-09!17;UBERON:0002021!4.84e-08!10;UBERON:0000411!4.84e-08!10;UBERON:0001950!4.84e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.33e-33,34;UBERON:0000073,9.06e-31,54;UBERON:0001017,1.34e-29,73;UBERON:0001016,1.35e-28,75;UBERON:0001049,2.86e-27,52;UBERON:0005068,2.86e-27,52;UBERON:0006241,2.86e-27,52;UBERON:0007135,2.86e-27,52;UBERON:0003528,8.46e-24,29;UBERON:0002791,8.46e-24,29;UBERON:0001893,8.46e-24,29;UBERON:0002021,1.60e-21,10;UBERON:0000411,1.60e-21,10;UBERON:0001950,1.60e-21,10;UBERON:0004121,6.99e-21,95;UBERON:0000924,6.99e-21,95;UBERON:0006601,6.99e-21,95;UBERON:0002346,7.45e-21,64;UBERON:0003075,7.45e-21,64;UBERON:0007284,7.45e-21,64;UBERON:0002616,7.98e-20,46;UBERON:0000955,2.80e-19,47;UBERON:0006238,2.80e-19,47;UBERON:0002780,2.13e-18,39;UBERON:0001890,2.13e-18,39;UBERON:0006240,2.13e-18,39;UBERON:0003080,8.25e-18,40;UBERON:0010371,1.97e-17,73;UBERON:0000956,2.87e-15,21;UBERON:0001869,2.87e-15,21;UBERON:0000203,2.87e-15,21;UBERON:0002619,5.79e-14,17;UBERON:0003056,1.31e-13,49;UBERON:0010314,1.54e-13,92;UBERON:0001948,8.33e-12,5;UBERON:0002315,8.33e-12,5;UBERON:0003076,2.79e-10,12;UBERON:0003057,2.79e-10,12;UBERON:0002420,7.25e-10,8;UBERON:0007245,7.25e-10,8;UBERON:0010009,7.25e-10,8;UBERON:0010011,7.25e-10,8;UBERON:0000454,7.25e-10,8;UBERON:0002240,9.30e-10,6;UBERON:0005174,9.30e-10,6;UBERON:0001137,9.30e-10,6;UBERON:0000025,1.38e-09,114;UBERON:0004111,1.64e-08,122;UBERON:0002038,5.85e-08,3;UBERON:0009663,5.85e-08,3;UBERON:0009661,5.85e-08,3;UBERON:0000125,5.85e-08,3;UBERON:0002308,5.85e-08,3;UBERON:0002257,2.19e-07,3;UBERON:0011216,8.38e-07,194 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0.70219357896598,0.34243593645101,0.0797721589953364,0,0.174840804837995,0,0.202475267389826,0,0.315462165358238,0,0,0.255129870453209,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.550640256485045,0,0.436050312760893,0.219686182734472,0.777719596297134,0.839918529752175,1.43752564364972,0.167782606057736,0,0.336093799142464,1.28629718017973,0,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0.338844532069132,0,1.7997994345628,1.97773272513395,1.4209602298922,1.79760066311043,1.15265491596466,0.829516898467821,2.02508907497536,1.47227472945967,4.28476476605705,4.63823935998388,0.367472397644862,0.766763768145891,0.919218786610021,0,3.83062014255563,3.68655679814984,1.84640802822271,1.55528994124096,2.6045668527838,4.4669279840221,2.25105044012672,4.5839474333043,4.41942878210502,3.27454865837937,1.3047961207771,0.681535739998656,0.302286240427142,0,0,0.679971333707751,0.539703191637817,0,0,0.702222100658759,0.340860645156116,0.259786004602869,0,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.34255163915718,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0,0.289198713839823,0,0,0.220841518460394,0.484875253135222,1.86391761218122,0,1.04723353406728,0,0.479260498023681,0,0.508280908292259,0.449371918214468,0,0.753926112677186,0.347648640384553,1.27857728665165,1.66230435647648,0.486723789203273,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.536546802799238,0.116765342367169,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.536825675041487,1.05144974282064,0.205809224758569,0.330418782983798,0,0.639864751605702,0.232236671860439,0,0,0,0.570676878337677,0,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0.189709611372772,0,0,0.123397163921801,0,0,0,0.449724224769707,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0.358794827043824,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,1.12385412991454,1.05490517932983,0,0.504941854408746,0,0,0.861693590931196,0.955875191810208,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0,0.890328018336276,0.325773918707152,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0,0,0,0,0,1.03135543248187,0,0.36012218806262,0.388076051348264,0,0.177340233642274,0,0.329098041204242,0.608929898229199,0.469343416127421,0,0.441056796109924,0.16488625294148,0.322928853391811,0.301564624640779,0.119372344003136,0,0,0.741701208042039,0.170870880797853,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0.39736270956253,0,0.147689527174577,0.201932899896295,0,0,0,0,0,0,0.443971906748129,0.269141569828427,0.671538465456314,0,0.375364950902364,0,0,0,2.82375921308533,4.14292712856459,2.86447756719698,4.1244763762485,3.42541259885321,1.5107877947794,3.37511250115903,1.35096360967266,3.17199686288943,4.65984280576638,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0.655490552289177,0.256100609619477,0.287177344778066,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.507687647350059,0.548783918618318,0.263069711437843,0.271608227691724,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0,0.441182838239031,0.231867835620421 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|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0.70219357896598,0.34243593645101,0.0797721589953364,0,0.174840804837995,0,0.202475267389826,0,0.315462165358238,0,0,0.255129870453209,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.550640256485045,0,0.436050312760893,0.219686182734472,0.777719596297134,0.839918529752175,1.43752564364972,0.167782606057736,0,0.336093799142464,1.28629718017973,0,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0.338844532069132,0,1.7997994345628,1.97773272513395,1.4209602298922,1.79760066311043,1.15265491596466,0.829516898467821,2.02508907497536,1.47227472945967,4.28476476605705,4.63823935998388,0.367472397644862,0.766763768145891,0.919218786610021,0,3.83062014255563,3.68655679814984,1.84640802822271,1.55528994124096,2.6045668527838,4.4669279840221,2.25105044012672,4.5839474333043,4.41942878210502,3.27454865837937,1.3047961207771,0.681535739998656,0.302286240427142,0,0,0.679971333707751,0.539703191637817,0,0,0.702222100658759,0.340860645156116,0.259786004602869,0,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.34255163915718,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0,0.289198713839823,0,0,0.220841518460394,0.484875253135222,1.86391761218122,0,1.04723353406728,0,0.479260498023681,0,0.508280908292259,0.449371918214468,0,0.753926112677186,0.347648640384553,1.27857728665165,1.66230435647648,0.486723789203273,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.536546802799238,0.116765342367169,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.536825675041487,1.05144974282064,0.205809224758569,0.330418782983798,0,0.639864751605702,0.232236671860439,0,0,0,0.570676878337677,0,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0.189709611372772,0,0,0.123397163921801,0,0,0,0.449724224769707,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0.358794827043824,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,1.12385412991454,1.05490517932983,0,0.504941854408746,0,0,0.861693590931196,0.955875191810208,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0,0.890328018336276,0.325773918707152,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0,0,0,0,0,1.03135543248187,0,0.36012218806262,0.388076051348264,0,0.177340233642274,0,0.329098041204242,0.608929898229199,0.469343416127421,0,0.441056796109924,0.16488625294148,0.322928853391811,0.301564624640779,0.119372344003136,0,0,0.741701208042039,0.170870880797853,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0.39736270956253,0,0.147689527174577,0.201932899896295,0,0,0,0,0,0,0.443971906748129,0.269141569828427,0.671538465456314,0,0.375364950902364,0,0,0,2.82375921308533,4.14292712856459,2.86447756719698,4.1244763762485,3.42541259885321,1.5107877947794,3.37511250115903,1.35096360967266,3.17199686288943,4.65984280576638,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0.655490552289177,0.256100609619477,0.287177344778066,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.507687647350059,0.548783918618318,0.263069711437843,0.271608227691724,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr5:136387174..136387192,- | |||
}} | }} |
Latest revision as of 19:46, 3 August 2015
Short description: | p@chr5:136387174..136387192, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:136387174..136387192, - |
Coexpression cluster: | MCL_coexpression_mm9:856 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.41e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.41e-24 | 23 |
neural cell | 6.95e-16 | 43 |
neuron | 8.18e-16 | 33 |
neuronal stem cell | 8.18e-16 | 33 |
neuroblast | 8.18e-16 | 33 |
electrically signaling cell | 8.18e-16 | 33 |
ectodermal cell | 2.08e-15 | 44 |
neurectodermal cell | 2.08e-15 | 44 |
electrically responsive cell | 2.39e-14 | 39 |
electrically active cell | 2.39e-14 | 39 |
embryonic cell | 7.54e-09 | 70 |
somatic stem cell | 3.66e-08 | 91 |
multi fate stem cell | 3.66e-08 | 91 |
neuron of the substantia nigra | 5.85e-08 | 3 |
neuron of the ventral spinal cord | 2.19e-07 | 3 |
stem cell | 2.58e-07 | 97 |
striatum neuron | 4.34e-07 | 3 |
bone marrow cell | 6.68e-07 | 3 |
mesenchymal stem cell of the bone marrow | 6.68e-07 | 3 |