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{{f5samples
{{f5samples
|id=FF:11594-120H1
|DRA_sample_Accession=CAGE@SAMD00004840
|name=Renal Glomerular Endothelial Cells, donor2
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004840
|sample_id=11594
|accession_numbers=CAGE;DRX008431;DRR009303;DRZ000728;DRZ002113;DRZ012078;DRZ013463
|rna_tube_id=120H1
|accession_numbers_RNASeq=sRNA-Seq;DRX037039;DRR041405;DRZ007047
|rna_box=120
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002113,UBERON:0002100,UBERON:0000483,UBERON:0001851,UBERON:0000479,UBERON:0000064,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0004120,UBERON:0006555,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003103,UBERON:0009569,UBERON:0000489,UBERON:0000353,UBERON:0005177,UBERON:0005172,UBERON:0010317,UBERON:0004819,UBERON:0005173,UBERON:0001285,UBERON:0000074,UBERON:0001225,UBERON:0001229,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0008987,UBERON:0007684,UBERON:0000916
|rna_position=H1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000666,CL:1000746,CL:1000497,CL:0002518,CL:0002681,CL:1000449,CL:0002584,CL:1000612,CL:0002188
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=lot:sc1101
|rna_catalog_number=SC4005
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=kidney
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=9.6
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=endothelial cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=10
|rna_concentration=1.299
|sample_note=
|profile_hcage=CNhs12086,LSID838,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10004,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000115,CL:0000144,CL:0000213,CL:0000215,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0000666,CL:0002078,CL:0002188,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000058,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000074,UBERON:0000080,UBERON:0000083,UBERON:0000119,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000489,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001008,UBERON:0001062,UBERON:0001225,UBERON:0001229,UBERON:0001230,UBERON:0001285,UBERON:0001851,UBERON:0002050,UBERON:0002100,UBERON:0002113,UBERON:0002120,UBERON:0002417,UBERON:0002532,UBERON:0002553,UBERON:0003060,UBERON:0003064,UBERON:0003074,UBERON:0003081,UBERON:0003103,UBERON:0003104,UBERON:0003220,UBERON:0003886,UBERON:0003887,UBERON:0003914,UBERON:0003918,UBERON:0004111,UBERON:0004120,UBERON:0004198,UBERON:0004199,UBERON:0004208,UBERON:0004209,UBERON:0004819,UBERON:0004875,UBERON:0004876,UBERON:0005095,UBERON:0005103,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005256,UBERON:0005291,UBERON:0005423,UBERON:0005721,UBERON:0005749,UBERON:0005754,UBERON:0006553,UBERON:0006554,UBERON:0006555,UBERON:0007684,UBERON:0007687,UBERON:0009142,UBERON:0009201
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000153
|comment=Previously:
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!2.14!180.30!SOX18;;chr8:10588010..10588030,-!p1@SOX7!1.90!78.92!SOX7;;chr21:39870339..39870443,-!p1@ERG!1.90!78.07!ERG;;chr17:46682321..46682362,-!p1@HOXB6!1.57!36.57!HOXB6;;chr8:55370487..55370503,+!p1@SOX17!1.53!32.83!SOX17;;chr5:71803177..71803255,-!p1@ZNF366!1.49!29.94!ZNF366;;chr17:6926362..6926377,+!p1@BCL6B!1.46!27.73!BCL6B;;chr10:94449703..94449718,+!p1@HHEX!1.45!101.55!HHEX;;chr19:13213511..13213545,-!p2@LYL1!1.38!25.17!LYL1;;chr6:34204921..34204939,+!p3@HMGA1!1.36!627.31!HMGA1;;chr17:46688334..46688385,-!p1@HOXB7!1.35!30.62!HOXB7;;chr17:46675558..46675577,-!p2@HOXB6!1.28!18.20!HOXB6;;chr9:124991204..124991246,-!p1@LHX6!1.28!18.20!LHX6;;chr16:86544113..86544145,+!p1@FOXF1!1.27!21.94!FOXF1;;chr12:96588368..96588394,+!p3@ELK3!1.25!45.07!ELK3;;chr17:46690839..46690884,-!p1@HOXB8!1.22!15.48!HOXB8;;chr17:46655672..46655697,-!p3@HOXB4!1.21!15.14!HOXB4;;chr2:177053386..177053402,+!p1@HOXD1!1.20!14.80!HOXD1;;chr1:6479968..6479986,-!p1@HES2!1.19!14.46!HES2;;chr20:590944..590960,-!p1@TCF15!1.19!14.46!TCF15;;chr19:13213662..13213686,-!p1@LYL1!1.16!19.73!LYL1;;chr4:57522166..57522260,-!p2@HOPX!1.13!14.46!HOPX;;chr18:53068911..53068935,-!p4@TCF4!1.12!13.61!TCF4;;chr17:1959369..1959388,+!p2@HIC1!1.09!30.11!HIC1;;chr20:50721803..50721857,-!p2@ZFP64!1.05!16.33!ZFP64;;chr19:46801639..46801699,+!p1@HIF3A!1.05!10.21!HIF3A;;chr17:46691732..46691766,-!p4@HOXB8!1.03!9.70!HOXB8;;chr3:128206762..128206781,-!p2@GATA2!1.00!57.66!GATA2;;chr19:13213399..13213414,-!p6@LYL1!0.98!8.50!LYL1;;chr2:176994408..176994492,+!p1@HOXD8!0.97!8.33!HOXD8;;chr20:42543441..42543497,+!p1@TOX2!0.95!37.08!TOX2;;chr20:42543506..42543549,+!p2@TOX2!0.94!19.22!TOX2;;chr15:37390850..37390909,-!p3@MEIS2!0.92!14.63!MEIS2;;chr17:46675420..46675465,-!p3@HOXB6!0.91!8.33!HOXB6;;chr15:96873984..96873999,+!p3@NR2F2!0.90!53.41!NR2F2;;chr4:57522598..57522664,-!p3@HOPX!0.89!6.80!HOPX;;chr10:31288370..31288393,-!p3@ZNF438!0.88!6.63!ZNF438;;chr18:22932080..22932170,-!p1@ZNF521!0.87!28.58!ZNF521;;chr17:46687959..46688007,-!p2@HOXB7!0.86!8.84!HOXB7;;chr14:74256787..74256858,-!p6@C14orf43!0.85!6.12!C14orf43;;chr17:46675586..46675600,-!p6@HOXB6!0.84!5.95!HOXB6;;chr1:47695003..47695042,-!p2@TAL1!0.84!5.95!TAL1;;chr2:46524537..46524553,+!p1@EPAS1!0.82!590.57!EPAS1;;chr17:46655704..46655718,-!p2@HOXB4!0.82!8.67!HOXB4;;chr10:94449675..94449694,+!p2@HHEX!0.81!15.48!HHEX;;chr6:34204672..34204692,+!p1@HMGA1!0.79!634.11!HMGA1;;chr12:3068544..3068597,+!p1@TEAD4!0.79!33.34!TEAD4;;chr12:66218212..66218244,+!p5@HMGA2!0.79!7.82!HMGA2;;chr17:46692457..46692484,-!p2@HOXB8!0.79!5.10!HOXB8;;chr15:37392616..37392638,-!p2@MEIS2!0.78!16.84!MEIS2;;chr15:67418047..67418093,+!p4@SMAD3!0.78!6.46!SMAD3;;chr17:41623692..41623715,-!p1@ETV4!0.76!22.11!ETV4;;chr5:92918919..92918942,+!p1@NR2F1!0.75!22.79!NR2F1;;chr12:66218255..66218304,+!p3@HMGA2!0.75!13.27!HMGA2;;chr12:66218183..66218209,+!p4@HMGA2!0.75!9.36!HMGA2;;chr7:27205136..27205164,-!p1@HOXA9!0.75!4.59!HOXA9;;chr17:46675539..46675551,-!p7@HOXB6!0.75!4.59!HOXB6;;chr12:2986206..2986258,-!p2@FOXM1!0.74!30.11!FOXM1;;chr15:83953397..83953425,-!p1@BNC1!0.74!5.27!BNC1;;chr15:96874012..96874042,+!p2@NR2F2!0.72!43.20!NR2F2;;chr15:96874927..96874938,+!p8@NR2F2!0.72!9.87!NR2F2;;chr13:72441315..72441454,-!p1@DACH1!0.72!9.19!DACH1;;chr15:37392576..37392589,-!p12@MEIS2!0.72!5.27!MEIS2;;chr1:200008734..200008765,+!p2@NR5A2!0.72!4.25!NR5A2;;chr3:25469815..25469866,+!p3@RARB!0.72!4.25!RARB;;chr4:57522513..57522548,-!p4@HOPX!0.72!4.25!HOPX;;chr9:14314131..14314147,-!p2@NFIB!0.71!25.68!NFIB;;chr9:16705069..16705086,-!p3@BNC2!0.71!4.08!BNC2;;chr7:27196267..27196311,-!p1@HOXA7!0.71!4.08!HOXA7;;chr15:96873921..96873946,+!p1@NR2F2!0.70!129.27!NR2F2;;chr7:26191809..26191890,+!p1@NFE2L3!0.70!22.28!NFE2L3;;chr5:321810..321877,+!p1@AHRR!0.70!14.12!AHRR;;chr17:41623009..41623053,-!p4@ETV4!0.70!6.80!ETV4;;chr19:13213555..13213568,-!p5@LYL1!0.69!3.91!LYL1;;chr1:23885981..23886002,-!p1@ID3!0.68!761.51!ID3;;chr12:66218598..66218645,+!p2@HMGA2!0.68!19.90!HMGA2;;chr11:128563948..128564003,+!p1@FLI1!0.67!51.37!FLI1;;chr19:49865646..49865718,-!p1@TEAD2!0.67!36.23!TEAD2;;chr17:41622925..41622976,-!p3@ETV4!0.67!5.78!ETV4;;chr15:96876966..96877017,+!p12@NR2F2!0.66!5.44!NR2F2;;chr7:27169801..27169844,-!p2@HOXA4!0.66!3.57!HOXA4;;chr1:47697539..47697573,-!p3@TAL1!0.66!3.57!TAL1;;chr17:46622070..46622109,-!p1@HOXB2!0.65!8.50!HOXB2;;chr17:3571863..3571881,-!p1@TAX1BP3!0.64!282.87!TAX1BP3;;chr20:42295745..42295765,+!p1@MYBL2!0.64!64.30!MYBL2;;chr22:38597987..38598021,+!p2@MAFF!0.64!23.81!MAFF;;chr15:37392534..37392562,-!p10@MEIS2!0.64!3.74!MEIS2;;chr15:90544532..90544563,+!p1@ZNF710!0.63!7.31!ZNF710;;chr17:46622114..46622138,-!p4@HOXB2!0.63!5.44!HOXB2;;chr20:50159198..50159299,-!p1@NFATC2!0.63!5.10!NFATC2;;chr17:46692318..46692362,-!p5@HOXB8!0.63!3.23!HOXB8;;chr20:50179368..50179392,-!p2@NFATC2!0.62!4.25!NFATC2;;chr17:46659728..46659749,-!p3@HOXB3!0.61!3.06!HOXB3;;chr19:13213465..13213478,-!p7@LYL1!0.61!3.06!LYL1;;chr7:27183263..27183284,-!p2@HOXA5!0.61!3.06!HOXA5;;chr7:27183291..27183324,-!p1@HOXA5!0.61!3.06!HOXA5;;chr12:3069037..3069119,+!p2@TEAD4!0.60!11.91!TEAD4;;chr15:37392593..37392607,-!p13@MEIS2!0.60!3.74!MEIS2;;chr3:169381420..169381535,-!p1@MECOM!0.60!3.57!MECOM;;chr12:77459306..77459365,-!p1@E2F7!0.59!44.56!E2F7;;chr1:151032860..151032918,+!p1@MLLT11!0.59!41.50!MLLT11;;chr8:106330656..106330684,+!p1@ZFPM2!0.59!8.84!ZFPM2;;chr20:50721788..50721799,-!p8@ZFP64!0.59!2.89!ZFP64;;chr16:86612320..86612394,+!p1@FOXL1!0.59!2.89!FOXL1;;chr17:46688310..46688323,-!p4@HOXB7!0.59!2.89!HOXB7;;chr11:65686732..65686756,+!p2@DRAP1!0.58!14.29!DRAP1;;chr11:65686802..65686818,+!p6@DRAP1!0.58!5.44!DRAP1;;chr11:65667846..65667868,-!p1@FOSL1!0.57!89.13!FOSL1;;chr19:1652555..1652568,-!p2@TCF3!0.57!13.44!TCF3;;chr22:41697497..41697515,+!p2@ZC3H7B!0.57!8.67!ZC3H7B;;chr15:37392094..37392116,-!p6@MEIS2!0.57!3.57!MEIS2;;chr2:177001290..177001315,+!p1@HOXD3!0.57!2.72!HOXD3;;chr2:74730430..74730451,-!p1@LBX2!0.56!4.76!LBX2;;chr10:31288398..31288455,-!p2@ZNF438!0.56!3.23!ZNF438;;chr6:21597765..21597779,+!p2@SOX4!0.55!25.68!SOX4;;chr16:1429627..1429662,-!p2@UNKL!0.55!8.84!UNKL;;chr1:8926441..8926473,-!p10@ENO1!0.55!4.25!ENO1;;chr1:47696918..47696935,-!p6@TAL1!0.55!2.55!TAL1;;chr7:27205106..27205134,-!p2@HOXA9!0.55!2.55!HOXA9;;chr2:5832508..5832524,+!p1@SOX11!0.55!2.55!SOX11;;chr3:25470156..25470227,+!p2@RARB!0.55!2.55!RARB;;chr19:45908292..45908374,-!p1@PPP1R13L!0.54!27.56!PPP1R13L;;chr2:46524897..46524911,+!p2@EPAS1!0.54!8.16!EPAS1;;chr19:53496768..53496799,-!p1@ZNF702P!0.54!4.25!ZNF702P;;chr1:156470494..156470505,-!p3@MEF2D!0.54!3.91!MEF2D;;chr15:37391588..37391604,-!p11@MEIS2!0.54!3.40!MEIS2;;chr3:178789522..178789564,-!p2@ZMAT3!0.53!22.11!ZMAT3;;chr17:1958388..1958404,+!p1@HIC1!0.53!19.05!HIC1;;chr2:85360499..85360598,+!p1@TCF7L1!0.53!17.01!TCF7L1;;chr12:66218378..66218401,+!p6@HMGA2!0.53!4.08!HMGA2;;chr17:46622143..46622152,-!p14@HOXB2!0.53!2.38!HOXB2;;chr17:46687935..46687950,-!p3@HOXB7!0.53!2.38!HOXB7;;chr17:46692287..46692317,-!p7@HOXB8!0.53!2.38!HOXB8;;chr1:8934931..8934947,-!p4@ENO1!0.52!9.36!ENO1;;chr6:21593973..21593988,+!p1@SOX4!0.51!106.82!SOX4;;chr15:96873861..96873872,+!p9@NR2F2!0.51!5.44!NR2F2;;chr2:46602879..46602899,+!p8@EPAS1!0.51!2.89!EPAS1;;chr17:6926381..6926392,+!p2@BCL6B!0.51!2.21!BCL6B;;chr1:47691303..47691319,-!p5@TAL1!0.51!2.21!TAL1;;chr20:42602000..42602034,+!p5@TOX2!0.51!2.21!TOX2;;chr13:72441074..72441172,-!p2@DACH1!0.51!2.21!DACH1;;chr1:8938709..8938720,-!p3@ENO1!0.50!138.12!ENO1;;chr11:47236584..47236679,+!p1@DDB2!0.50!30.96!DDB2;;chr12:66218152..66218174,+!p10@HMGA2!0.50!2.38!HMGA2;;chr10:114710244..114710257,+!p3@TCF7L2!0.49!6.97!TCF7L2;;chr2:46612334..46612349,+!p6@EPAS1!0.49!3.06!EPAS1;;chr17:41623075..41623101,-!p9@ETV4!0.49!2.55!ETV4;;chr15:67418119..67418162,+!p5@SMAD3!0.49!2.38!SMAD3;;chr11:47236489..47236567,+!p2@DDB2!0.48!37.42!DDB2;;chr6:31126291..31126399,+!p1@TCF19!0.48!25.51!TCF19;;chr18:72922743..72922761,+!p3@TSHZ1!0.48!8.50!TSHZ1;;chr19:56152332..56152347,+!p4@ZNF580!0.48!5.61!ZNF580;;chr1:151032922..151032951,+!p2@MLLT11!0.48!3.91!MLLT11;;chr19:46800289..46800327,+!p2@HIF3A!0.48!2.04!HIF3A;;chr15:67358163..67358192,+!p1@SMAD3!0.47!62.08!SMAD3;;chr1:120190786..120190915,-!p1@ZNF697!0.47!18.71!ZNF697;;chr5:176738887..176738934,-!p1@MXD3!0.47!17.35!MXD3;;chr15:96874244..96874259,+!p5@NR2F2!0.47!5.78!NR2F2;;chr18:53257001..53257015,-!p5@TCF4!0.47!3.91!TCF4;;chr17:41622765..41622821,-!p2@ETV4!0.47!3.40!ETV4;;chr2:46602901..46602926,+!p7@EPAS1!0.47!2.89!EPAS1;;chr22:41697484..41697496,+!p3@ZC3H7B!0.47!2.72!ZC3H7B;;chr12:66218003..66218018,+!p9@HMGA2!0.47!2.55!HMGA2;;chr13:41240717..41240735,-!p2@FOXO1!0.46!17.18!FOXO1;;chr15:37392724..37392757,-!p1@MEIS2!0.46!11.40!MEIS2;;chr17:4890695..4890773,-!p2@CAMTA2!0.46!7.65!CAMTA2;;chr19:42636586..42636607,-!p1@POU2F2!0.46!6.63!POU2F2;;chr17:41623667..41623682,-!p8@ETV4!0.46!2.04!ETV4;;chr17:46671504..46671541,-!p2@HOXB5!0.46!1.87!HOXB5;;chr17:46675619..46675642,-!p5@HOXB6!0.46!1.87!HOXB6;;chr3:114343039..114343085,-!p8@ZBTB20!0.46!1.87!ZBTB20;;chr11:128563652..128563689,+!p3@FLI1!0.46!1.87!FLI1;;chr11:65429891..65429915,-!p7@RELA!0.46!1.87!RELA;;chr7:115670804..115670825,-!p1@TFEC!0.46!1.87!TFEC;;chr7:27170359..27170381,-!p1@HOXA4!0.46!1.87!HOXA4;;chr12:7079780..7079791,-!p2@PHB2!0.45!12.93!PHB2;;chr12:3068501..3068515,+!p4@TEAD4!0.45!3.74!TEAD4;;chr19:58341656..58341694,+!p5@ZNF587!0.45!2.38!ZNF587;;chr17:46622205..46622218,-!p3@HOXB2!0.45!2.21!HOXB2;;chr9:14314566..14314618,-!p1@NFIB!0.44!29.77!NFIB;;chr1:23696308..23696339,-!p2@ZNF436!0.44!4.59!ZNF436;;chr12:66218836..66218888,+!p1@HMGA2!0.43!22.28!HMGA2;;chr16:73092898..73092931,-!p1@ZFHX3!0.43!8.84!ZFHX3;;chr11:65430554..65430579,-!p3@RELA!0.43!5.61!RELA;;chr10:94449649..94449664,+!p3@HHEX!0.43!2.89!HHEX;;chr17:46675344..46675355,-!p9@HOXB6!0.43!1.70!HOXB6;;chr17:46675469..46675481,-!p4@HOXB6!0.43!1.70!HOXB6;;chr17:46692624..46692659,-!p3@HOXB8!0.43!1.70!HOXB8;;chr1:47695156..47695179,-!p10@TAL1!0.43!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ATA2;;chr3:141087562..141087594,+!p12@ZBTB38!0.18!0.51!ZBTB38;;chr3:25469875..25469893,+!p5@RARB!0.18!0.51!RARB;;chr3:5022272..5022321,+!p7@BHLHE40!0.18!0.51!BHLHE40;;chr4:149363662..149363688,-!p6@NR3C2!0.18!0.51!NR3C2;;chr5:124082525..124082536,-!p10@ZNF608!0.18!0.51!ZNF608;;chr5:124082548..124082571,-!p9@ZNF608!0.18!0.51!ZNF608;;chr5:92919312..92919334,+!p13@NR2F1!0.18!0.51!NR2F1;;chr6:126070748..126070768,+!p2@HEY2!0.18!0.51!HEY2;;chr6:21597687..21597708,+!p14@SOX4!0.18!0.51!SOX4;;chr7:100076646..100076657,-!p10@TSC22D4!0.18!0.51!TSC22D4;;chr7:138665870..138665905,-!p4@KIAA1549!0.18!0.51!KIAA1549;;chr7:27153454..27153469,-!p2@HOXA3!0.18!0.51!HOXA3;;chr7:27190547..27190591,-!p1@HOXA6!0.18!0.51!HOXA6;;chr7:27224842..27224872,-!p1@HOXA11!0.18!0.51!HOXA11;;chr7:64342913..64342935,+!p2@ZNF273!0.18!0.51!ZNF273;;chr8:30891078..30891128,-!p2@PURG!0.18!0.51!PURG;;chr8:55370693..55370704,+!p4@SOX17!0.18!0.51!SOX17;;chr9:14083091..14083096,-!p12@NFIB!0.18!0.51!NFIB;;chr15:67430351..67430366,+!p10@SMAD3!0.18!0.51!SMAD3;;chr15:90294062..90294079,-!p2@MESP1!0.18!0.51!MESP1;;chr15:96869206..96869220,+!p21@NR2F2!0.18!0.51!NR2F2;;chr15:96880438..96880445,+!p23@NR2F2!0.18!0.51!NR2F2;;chr17:46682368..46682373,-!p12@HOXB6!0.18!0.51!HOXB6;;chr17:46692582..46692589,-!p14@HOXB8!0.18!0.51!HOXB8;;chr17:46703826..46703845,-!p3@HOXB9!0.18!0.51!HOXB9;;chr17:46703942..46703964,-!p4@HOXB9!0.18!0.51!HOXB9;;chr18:22932208..22932219,-!p6@ZNF521!0.18!0.51!ZNF521;;chr18:53177899..53177918,-!p33@TCF4!0.18!0.51!TCF4;;chr19:3381943..3381961,+!p8@NFIC!0.18!0.51!NFIC;;chr19:35454968..35454984,-!p3@ZNF792!0.18!0.51!ZNF792;;chr19:50434005..50434020,+!p10@ATF5!0.18!0.51!ATF5;;chr19:7584204..7584218,+!p9@ZNF358!0.18!0.51!ZNF358;;chr1:161014760..161014788,-!p4@USF1!0.18!0.51!USF1;;chr1:211433429..211433441,+!p14@RCOR3!0.18!0.51!RCOR3;;chr22:42229100..42229146,+!p1@SREBF2!0.17!133.69!SREBF2;;chr1:8938766..8938774,-!p2@ENO1!0.17!92.02!ENO1;;chr2:74374995..74375055,-!p1@BOLA3!0.17!59.02!BOLA3;;chr14:100705458..100705529,+!p1@YY1!0.17!40.48!YY1;;chr16:67876180..67876242,+!p1@THAP11!0.17!21.94!THAP11;;chr3:52001448..52001478,-!p2@PCBP4!0.17!18.03!PCBP4;;chr6:144329384..144329405,-!p1@PLAGL1!0.17!14.80!PLAGL1;;chr22:38598086..38598105,+!p1@MAFF!0.17!13.61!MAFF;;chr16:30418910..30418961,+!p1@ZNF771!0.17!9.36!ZNF771;;chr6:33422343..33422394,+!p1@ZBTB9!0.17!8.33!ZBTB9;;chr1:59249688..59249703,-!p3@JUN!0.17!7.31!JUN;;chr2:242576641..242576731,-!p2@THAP4!0.17!4.42!THAP4;;chr2:46524474..46524491,+!p4@EPAS1!0.17!2.38!EPAS1;;chr11:62369383..62369399,-!p6@MTA2!0.17!2.21!MTA2;;chr16:29818132..29818144,+!p12@MAZ!0.17!1.87!MAZ;;chr1:33004734..33004807,+!p2@ZBTB8A!0.17!1.70!ZBTB8A;;chr2:46524506..46524514,+!p5@EPAS1!0.17!1.70!EPAS1;;chr11:113930291..113930339,+!p2@ZBTB16!0.17!1.36!ZBTB16;;chr10:114711019..114711041,+!p7@TCF7L2!0.17!1.19!TCF7L2;;chr22:42269885..42269899,+!p4@SREBF2!0.17!1.19!SREBF2;;chr1:35657082..35657099,-!p8@SFPQ!0.17!1.19!SFPQ;;chr18:52989565..52989623,-!p9@TCF4!0.17!0.85!TCF4;;chr15:85144307..85144329,+!p2@ZSCAN2!0.17!0.68!ZSCAN2;;chr11:57103327..57103372,-!p1@SSRP1!0.16!62.08!SSRP1;;chr14:21566731..21566836,-!p1@ZNF219!0.16!13.44!ZNF219;;chr15:64752747..64752794,+!p1@ZNF609!0.16!10.89!ZNF609;;chr4:1873100..1873152,+!p1@WHSC1!0.16!9.36!WHSC1;;chr18:77160282..77160343,+!p2@NFATC1!0.16!7.48!NFATC1;;chr16:30583017..30583064,-!p1@ZNF688!0.16!5.95!ZNF688;;chr12:54772960..54773015,-!p3@ZNF385A!0.16!5.61!ZNF385A;;chr6:12011943..12012015,+!p2@HIVEP1!0.16!3.40!HIVEP1;;chr7:42276787..42276815,-!p1@GLI3!0.16!2.72!GLI3;;chr11:45168182..45168214,+!p1@ENST00000399269!0.16!2.72!PRDM11;;chr19:46271505..46271575,-!p2@SIX5!0.16!2.55!SIX5;;chrX:70315688..70315709,+!p1@FOXO4!0.16!2.21!FOXO4;;chr1:37940102..37940131,+!p2@ZC3H12A!0.16!1.87!ZC3H12A;;chr12:10875351..10875422,-!p4@CSDA!0.16!1.70!CSDA;;chr17:61920116..61920131,-!p5@SMARCD2!0.16!1.70!SMARCD2;;chr19:35455110..35455149,-!p1@ZNF792!0.16!1.70!ZNF792;;chr15:96869255..96869291,+!p6@NR2F2!0.16!1.53!NR2F2;;chr4:87857433..87857472,+!p9@AFF1!0.16!1.53!AFF1;;chr2:169312600..169312606,+!p2@CERS6!0.16!1.19!CERS6;;chr8:145159846..145159889,+!p6@MAF1!0.16!1.02!MAF1;;chr2:28616604..28616615,+!p6@FOSL2!0.16!0.85!FOSL2;;chr6:157099016..157099027,+!p13@ARID1B!0.16!0.68!ARID1B;;chr10:8095593..8095625,+!p3@GATA3!0.16!0.68!GATA3;;chr14:35873136..35873155,-!p9@NFKBIA!0.16!0.68!NFKBIA;;chr15:96869222..96869251,+!p18@NR2F2!0.16!0.68!NR2F2;;chr10:3827389..3827408,-!p1@KLF6!0.15!97.63!KLF6;;chr8:145515263..145515299,+!p1@HSF1!0.15!92.19!HSF1;;chr1:43148059..43148108,+!p1@YBX1!0.15!81.30!YBX1;;chr19:3572925..3573014,+!p1@HMG20B!0.15!36.74!HMG20B;;chr16:29817789..29817838,+!p2@MAZ!0.15!16.50!MAZ;;chr22:41601296..41601355,+!p1@L3MBTL2!0.15!14.29!L3MBTL2;;chr20:35201993..35202050,+!p1@TGIF2!0.15!13.78!TGIF2;;chr20:62601243..62601291,-!p1@ZNF512B!0.15!11.91!ZNF512B;;chr2:42795745..42795824,+!p1@MTA3!0.15!11.23!MTA3;;chr12:57916466..57916523,+!p2@MBD6!0.15!10.72!MBD6;;chr10:3827371..3827386,-!p2@KLF6!0.15!10.04!KLF6;;chr15:85144229..8514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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000115;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000213;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002078;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002188;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002518;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002584;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:1000746;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000353;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001008;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002113;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004875;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004876;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0009201
|ffid_belonging_in_development=CL:0000222
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 43:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|name=Renal Glomerular Endothelial Cells, donor2
|namespace=FANTOM5
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|rna_box=120
|rna_catalog_number=SC4005
|rna_concentration=1.299
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=lot:sc1101
|rna_od260/230=
|rna_od260/280=
|rna_position=H1
|rna_rin=9.6
|rna_sample_type=total RNA
|rna_tube_id=120H1
|rna_weight_ug=10
|rnaseq_library_id=SRhi10004.GATCAG
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=endothelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.15859377796142e-230!GO:0005737;cytoplasm;8.377865395848e-194!GO:0043226;organelle;3.93464352699521e-185!GO:0043229;intracellular organelle;9.03649823746238e-185!GO:0043231;intracellular membrane-bound organelle;3.71332469246626e-182!GO:0043227;membrane-bound organelle;5.85060954425455e-182!GO:0044444;cytoplasmic part;1.86994266398311e-148!GO:0044422;organelle part;4.21248403159992e-142!GO:0044446;intracellular organelle part;1.23127252898215e-140!GO:0032991;macromolecular complex;4.28473899606634e-91!GO:0044237;cellular metabolic process;3.30176890497317e-83!GO:0044238;primary metabolic process;3.30176890497317e-83!GO:0030529;ribonucleoprotein complex;1.86507606211481e-81!GO:0005739;mitochondrion;1.83809638001691e-80!GO:0043170;macromolecule metabolic process;1.23041136503933e-74!GO:0005515;protein binding;1.87497931520619e-72!GO:0043233;organelle lumen;2.00601109741792e-66!GO:0031974;membrane-enclosed lumen;2.00601109741792e-66!GO:0005634;nucleus;1.75635550372381e-60!GO:0003723;RNA binding;1.6110673384933e-59!GO:0044428;nuclear part;4.0341995549947e-59!GO:0031090;organelle membrane;2.41287479420102e-57!GO:0044429;mitochondrial part;1.71728059278304e-54!GO:0005840;ribosome;2.67985370621033e-53!GO:0019538;protein metabolic process;3.02361861503188e-53!GO:0003735;structural constituent of ribosome;1.68619916585106e-47!GO:0006412;translation;2.83300953441659e-47!GO:0044260;cellular macromolecule metabolic process;3.61463763293312e-47!GO:0031967;organelle envelope;5.59670216298022e-47!GO:0044267;cellular protein metabolic process;5.59670216298022e-47!GO:0031975;envelope;1.44798264554645e-46!GO:0043234;protein complex;1.31096416753954e-45!GO:0016043;cellular component organization and biogenesis;2.55802736413693e-45!GO:0009058;biosynthetic process;4.08813471949689e-42!GO:0033279;ribosomal subunit;2.15012590138278e-41!GO:0005829;cytosol;1.54808343512595e-40!GO:0006396;RNA processing;1.30721531799188e-39!GO:0044249;cellular biosynthetic process;1.331884004684e-39!GO:0015031;protein transport;4.92346853498811e-39!GO:0043283;biopolymer metabolic process;8.89542804312053e-39!GO:0033036;macromolecule localization;3.27169288884621e-38!GO:0005740;mitochondrial envelope;7.65666906514626e-38!GO:0009059;macromolecule biosynthetic process;1.32653705550673e-37!GO:0031981;nuclear lumen;3.40232698524582e-36!GO:0045184;establishment of protein localization;5.23568874052096e-36!GO:0008104;protein localization;7.1827074880069e-36!GO:0031966;mitochondrial membrane;1.19239605662005e-35!GO:0006996;organelle organization and biogenesis;8.48602385048335e-33!GO:0019866;organelle inner membrane;9.41050742353601e-33!GO:0043228;non-membrane-bound organelle;1.96012325982407e-32!GO:0043232;intracellular non-membrane-bound organelle;1.96012325982407e-32!GO:0046907;intracellular transport;5.89968380413365e-32!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.97199627970649e-31!GO:0010467;gene expression;3.98315750438201e-31!GO:0005743;mitochondrial inner membrane;7.27282307037918e-31!GO:0065003;macromolecular complex assembly;7.42920791074901e-30!GO:0016071;mRNA metabolic process;1.04164304345158e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.55137053560507e-29!GO:0008380;RNA splicing;1.92275991720674e-28!GO:0022607;cellular component assembly;8.93499544166952e-27!GO:0006886;intracellular protein transport;2.74773430076961e-26!GO:0006397;mRNA processing;9.24890207523342e-26!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.77986210948301e-25!GO:0006259;DNA metabolic process;3.9181787174515e-24!GO:0044445;cytosolic part;5.45629286968297e-24!GO:0006119;oxidative phosphorylation;6.52405194891391e-23!GO:0044455;mitochondrial membrane part;1.59790493948314e-22!GO:0015934;large ribosomal subunit;2.10090318611073e-22!GO:0000166;nucleotide binding;2.99320071586098e-22!GO:0012505;endomembrane system;1.07032308394566e-21!GO:0005654;nucleoplasm;1.25462761574114e-21!GO:0051649;establishment of cellular localization;3.44319777840538e-21!GO:0005681;spliceosome;5.24651295627874e-21!GO:0007049;cell cycle;5.75236578583385e-21!GO:0051641;cellular localization;7.1632823628272e-21!GO:0031980;mitochondrial lumen;1.34131197102509e-20!GO:0005759;mitochondrial matrix;1.34131197102509e-20!GO:0015935;small ribosomal subunit;4.40333164551197e-20!GO:0005783;endoplasmic reticulum;1.46997907110795e-19!GO:0005746;mitochondrial respiratory chain;8.05520235806828e-19!GO:0006457;protein folding;5.05837900686643e-18!GO:0044451;nucleoplasm part;6.03825954158241e-18!GO:0016462;pyrophosphatase activity;1.3856937273932e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.52871194549636e-17!GO:0051186;cofactor metabolic process;1.52871194549636e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;1.9967389764643e-17!GO:0016874;ligase activity;4.16584839315175e-17!GO:0044432;endoplasmic reticulum part;4.69512249599213e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.68560614451811e-17!GO:0048770;pigment granule;9.1737278135318e-17!GO:0042470;melanosome;9.1737278135318e-17!GO:0017111;nucleoside-triphosphatase activity;1.03918081715043e-16!GO:0022402;cell cycle process;1.06338061592617e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.72307869528852e-16!GO:0003954;NADH dehydrogenase activity;1.72307869528852e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.72307869528852e-16!GO:0043412;biopolymer modification;2.6806344695437e-16!GO:0032553;ribonucleotide binding;4.27198894182544e-16!GO:0032555;purine ribonucleotide binding;4.27198894182544e-16!GO:0017076;purine nucleotide binding;8.67658306133841e-16!GO:0005794;Golgi apparatus;1.03982391004326e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.46790180074021e-15!GO:0005730;nucleolus;1.53460400286601e-15!GO:0044265;cellular macromolecule catabolic process;1.6444246917795e-15!GO:0005761;mitochondrial ribosome;2.20058910859181e-15!GO:0000313;organellar ribosome;2.20058910859181e-15!GO:0000278;mitotic cell cycle;3.3488969359142e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.76517285362677e-15!GO:0006512;ubiquitin cycle;5.28321924742761e-15!GO:0008134;transcription factor binding;5.71753477549096e-15!GO:0006464;protein modification process;6.50603355312971e-15!GO:0022618;protein-RNA complex assembly;9.80569294492566e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.26034221819731e-14!GO:0042773;ATP synthesis coupled electron transport;1.26034221819731e-14!GO:0043285;biopolymer catabolic process;1.65256389931855e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.74197059227928e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.74607160561259e-14!GO:0045271;respiratory chain complex I;1.74607160561259e-14!GO:0005747;mitochondrial respiratory chain complex I;1.74607160561259e-14!GO:0009057;macromolecule catabolic process;2.21183992651807e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.99459932174853e-14!GO:0016192;vesicle-mediated transport;4.48957502625365e-14!GO:0044248;cellular catabolic process;5.28324080375387e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.4030770505457e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;6.74249435149479e-14!GO:0006605;protein targeting;6.84484417819228e-14!GO:0003676;nucleic acid binding;7.91056304989033e-14!GO:0019941;modification-dependent protein catabolic process;1.13305266878531e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.13305266878531e-13!GO:0044257;cellular protein catabolic process;1.3349838389974e-13!GO:0006511;ubiquitin-dependent protein catabolic process;2.2168471255096e-13!GO:0006732;coenzyme metabolic process;4.75172345829998e-13!GO:0043687;post-translational protein modification;1.11288776043979e-12!GO:0006974;response to DNA damage stimulus;1.14242121001907e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.27398861845887e-12!GO:0000375;RNA splicing, via transesterification reactions;1.27398861845887e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.27398861845887e-12!GO:0032559;adenyl ribonucleotide binding;1.40124818442345e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.7392706430742e-12!GO:0005524;ATP binding;1.86953879719984e-12!GO:0030163;protein catabolic process;1.93423451045641e-12!GO:0051082;unfolded protein binding;2.93994669807134e-12!GO:0005789;endoplasmic reticulum membrane;3.14098647536554e-12!GO:0009055;electron carrier activity;3.55615616827484e-12!GO:0030554;adenyl nucleotide binding;3.65492249446533e-12!GO:0012501;programmed cell death;4.76793663317578e-12!GO:0048193;Golgi vesicle transport;4.78197284960978e-12!GO:0006915;apoptosis;6.31625444201814e-12!GO:0005694;chromosome;6.58139112228049e-12!GO:0044427;chromosomal part;1.07822588370937e-11!GO:0008135;translation factor activity, nucleic acid binding;1.52210044803185e-11!GO:0051276;chromosome organization and biogenesis;4.401488793346e-11!GO:0000087;M phase of mitotic cell cycle;6.43339161484931e-11!GO:0007067;mitosis;6.5601386144488e-11!GO:0022403;cell cycle phase;9.43018850542379e-11!GO:0008219;cell death;1.38424930594072e-10!GO:0016265;death;1.38424930594072e-10!GO:0009259;ribonucleotide metabolic process;1.46821220533371e-10!GO:0016070;RNA metabolic process;1.49293028026858e-10!GO:0005635;nuclear envelope;1.49293028026858e-10!GO:0051726;regulation of cell cycle;1.53151789036411e-10!GO:0042254;ribosome biogenesis and assembly;2.10911499117718e-10!GO:0006163;purine nucleotide metabolic process;2.22976528257067e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;2.39180244102054e-10!GO:0000074;regulation of progression through cell cycle;2.71709394150788e-10!GO:0003712;transcription cofactor activity;4.92795262330103e-10!GO:0009150;purine ribonucleotide metabolic process;5.04278148169226e-10!GO:0005793;ER-Golgi intermediate compartment;8.1894780859892e-10!GO:0006323;DNA packaging;1.00031177459552e-09!GO:0006281;DNA repair;1.03370328683724e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.09462412141979e-09!GO:0008639;small protein conjugating enzyme activity;1.09462412141979e-09!GO:0051188;cofactor biosynthetic process;1.18498273874545e-09!GO:0006461;protein complex assembly;1.25125028844608e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.54019071793505e-09!GO:0006164;purine nucleotide biosynthetic process;1.67761562815356e-09!GO:0006399;tRNA metabolic process;1.70191502481264e-09!GO:0044453;nuclear membrane part;2.02773117196466e-09!GO:0004842;ubiquitin-protein ligase activity;2.32031074479111e-09!GO:0009260;ribonucleotide biosynthetic process;2.44415429702811e-09!GO:0030532;small nuclear ribonucleoprotein complex;2.84862277447405e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.72185100974077e-09!GO:0031965;nuclear membrane;3.91475667923344e-09!GO:0006413;translational initiation;4.20525849951425e-09!GO:0003743;translation initiation factor activity;4.99718620147762e-09!GO:0019787;small conjugating protein ligase activity;6.24180156536687e-09!GO:0009199;ribonucleoside triphosphate metabolic process;6.64949798745725e-09!GO:0006260;DNA replication;7.18876888703517e-09!GO:0009719;response to endogenous stimulus;7.77174976897479e-09!GO:0009056;catabolic process;7.8287569204182e-09!GO:0006793;phosphorus metabolic process;7.90682301572502e-09!GO:0006796;phosphate metabolic process;7.90682301572502e-09!GO:0016604;nuclear body;8.33267010653695e-09!GO:0051301;cell division;8.36266780697326e-09!GO:0009141;nucleoside triphosphate metabolic process;8.76072709915004e-09!GO:0000785;chromatin;8.94173534581378e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.38497849258835e-09!GO:0006913;nucleocytoplasmic transport;1.06679489553183e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.17795445042301e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.17795445042301e-08!GO:0042623;ATPase activity, coupled;1.18017414741415e-08!GO:0009060;aerobic respiration;1.2312667531757e-08!GO:0006446;regulation of translational initiation;1.32293715188739e-08!GO:0008565;protein transporter activity;2.28693400289134e-08!GO:0051169;nuclear transport;2.36494697135534e-08!GO:0009117;nucleotide metabolic process;2.65677266653819e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.65678386927323e-08!GO:0006333;chromatin assembly or disassembly;2.72643341945671e-08!GO:0000279;M phase;3.41609241424992e-08!GO:0007005;mitochondrion organization and biogenesis;3.64197799890769e-08!GO:0016740;transferase activity;3.75868001190372e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.2115339122893e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.2115339122893e-08!GO:0016881;acid-amino acid ligase activity;4.28006060269752e-08!GO:0016310;phosphorylation;6.43566242928419e-08!GO:0016887;ATPase activity;6.81803249522507e-08!GO:0015986;ATP synthesis coupled proton transport;7.12327617183001e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.12327617183001e-08!GO:0048523;negative regulation of cellular process;7.44668952478391e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.62460511767866e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.62460511767866e-08!GO:0050794;regulation of cellular process;7.67043936295431e-08!GO:0065004;protein-DNA complex assembly;7.68549473530404e-08!GO:0017038;protein import;1.00971666670482e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.17697126827658e-07!GO:0045333;cellular respiration;1.2049023898157e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.36951737987581e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.36951737987581e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.36951737987581e-07!GO:0046034;ATP metabolic process;1.38560663455734e-07!GO:0005768;endosome;1.39772937236944e-07!GO:0065002;intracellular protein transport across a membrane;1.39772937236944e-07!GO:0031988;membrane-bound vesicle;1.42834138499815e-07!GO:0003924;GTPase activity;1.46709413380556e-07!GO:0042981;regulation of apoptosis;1.77145776659486e-07!GO:0043067;regulation of programmed cell death;2.04847671855841e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.27300860023019e-07!GO:0005773;vacuole;2.31151627066347e-07!GO:0005643;nuclear pore;2.31247014442987e-07!GO:0009108;coenzyme biosynthetic process;2.72605056513945e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.74125297120802e-07!GO:0006364;rRNA processing;3.00267189766576e-07!GO:0015630;microtubule cytoskeleton;3.28137407366147e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.38310841452129e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.61728725995282e-07!GO:0019829;cation-transporting ATPase activity;3.85184929835338e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.90651362621186e-07!GO:0043038;amino acid activation;4.25103727344725e-07!GO:0006418;tRNA aminoacylation for protein translation;4.25103727344725e-07!GO:0043039;tRNA aminoacylation;4.25103727344725e-07!GO:0005788;endoplasmic reticulum lumen;4.44211479551059e-07!GO:0006334;nucleosome assembly;4.97847301554497e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.10149579969747e-07!GO:0044431;Golgi apparatus part;5.13506955432924e-07!GO:0006099;tricarboxylic acid cycle;5.77913594021978e-07!GO:0046356;acetyl-CoA catabolic process;5.77913594021978e-07!GO:0006916;anti-apoptosis;6.44336280431867e-07!GO:0043069;negative regulation of programmed cell death;6.46569199192465e-07!GO:0016072;rRNA metabolic process;7.07043245953197e-07!GO:0031497;chromatin assembly;7.53053823726207e-07!GO:0006754;ATP biosynthetic process;8.13327336166194e-07!GO:0006753;nucleoside phosphate metabolic process;8.13327336166194e-07!GO:0051246;regulation of protein metabolic process;8.48911605335959e-07!GO:0043066;negative regulation of apoptosis;8.87326819849805e-07!GO:0006888;ER to Golgi vesicle-mediated transport;8.97875689141821e-07!GO:0045259;proton-transporting ATP synthase complex;9.09778503048113e-07!GO:0031982;vesicle;9.20401828818831e-07!GO:0016779;nucleotidyltransferase activity;1.05592112496167e-06!GO:0016491;oxidoreductase activity;1.07956231903871e-06!GO:0006084;acetyl-CoA metabolic process;1.12866670363436e-06!GO:0031410;cytoplasmic vesicle;1.28276480279319e-06!GO:0031252;leading edge;1.69373976381702e-06!GO:0048519;negative regulation of biological process;2.1133518559943e-06!GO:0005762;mitochondrial large ribosomal subunit;2.17373118784334e-06!GO:0000315;organellar large ribosomal subunit;2.17373118784334e-06!GO:0000323;lytic vacuole;2.41480639601093e-06!GO:0005764;lysosome;2.41480639601093e-06!GO:0005525;GTP binding;2.53631393786293e-06!GO:0004298;threonine endopeptidase activity;2.55776658062884e-06!GO:0016787;hydrolase activity;2.58773470112282e-06!GO:0046930;pore complex;3.00045254479947e-06!GO:0051187;cofactor catabolic process;3.01161115677609e-06!GO:0030120;vesicle coat;3.07281856672328e-06!GO:0030662;coated vesicle membrane;3.07281856672328e-06!GO:0016607;nuclear speck;3.09589603717559e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.20080888387953e-06!GO:0006366;transcription from RNA polymerase II promoter;3.34445702165733e-06!GO:0032446;protein modification by small protein conjugation;3.49806367296508e-06!GO:0016567;protein ubiquitination;5.03333469629595e-06!GO:0008654;phospholipid biosynthetic process;5.04359216048837e-06!GO:0004386;helicase activity;5.04359216048837e-06!GO:0008026;ATP-dependent helicase activity;5.61563199173408e-06!GO:0003697;single-stranded DNA binding;6.61192697985766e-06!GO:0005770;late endosome;7.34128000261172e-06!GO:0000139;Golgi membrane;7.69647845039078e-06!GO:0048475;coated membrane;7.7830927857326e-06!GO:0030117;membrane coat;7.7830927857326e-06!GO:0009109;coenzyme catabolic process;9.37454096550363e-06!GO:0005667;transcription factor complex;9.58066445543705e-06!GO:0007264;small GTPase mediated signal transduction;9.74823379641381e-06!GO:0019899;enzyme binding;9.96705028018637e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.04730989407663e-05!GO:0000245;spliceosome assembly;1.07012356559023e-05!GO:0044440;endosomal part;1.17701125938883e-05!GO:0010008;endosome membrane;1.17701125938883e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.29064291640305e-05!GO:0016853;isomerase activity;1.57451958780158e-05!GO:0031968;organelle outer membrane;1.59881333304107e-05!GO:0007243;protein kinase cascade;1.62790798765871e-05!GO:0019867;outer membrane;1.77373344951069e-05!GO:0045786;negative regulation of progression through cell cycle;1.80433929399771e-05!GO:0045454;cell redox homeostasis;1.8298416736365e-05!GO:0016568;chromatin modification;2.01762409805305e-05!GO:0006752;group transfer coenzyme metabolic process;2.04139998162815e-05!GO:0032561;guanyl ribonucleotide binding;2.52489857183087e-05!GO:0019001;guanyl nucleotide binding;2.52489857183087e-05!GO:0051329;interphase of mitotic cell cycle;2.60394411544478e-05!GO:0016044;membrane organization and biogenesis;3.32886892125529e-05!GO:0005813;centrosome;3.4166572914203e-05!GO:0005741;mitochondrial outer membrane;3.51981550633584e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.60994131804736e-05!GO:0006091;generation of precursor metabolites and energy;3.97849420512045e-05!GO:0003713;transcription coactivator activity;4.04733295920708e-05!GO:0005769;early endosome;4.35754397020284e-05!GO:0051325;interphase;4.47076949296587e-05!GO:0006403;RNA localization;5.06301281741928e-05!GO:0003899;DNA-directed RNA polymerase activity;5.10804581035417e-05!GO:0050657;nucleic acid transport;5.19350266670376e-05!GO:0051236;establishment of RNA localization;5.19350266670376e-05!GO:0050658;RNA transport;5.19350266670376e-05!GO:0051170;nuclear import;5.59081095920056e-05!GO:0003714;transcription corepressor activity;5.62962095559789e-05!GO:0000151;ubiquitin ligase complex;6.30015218596856e-05!GO:0000314;organellar small ribosomal subunit;6.35178394986141e-05!GO:0005763;mitochondrial small ribosomal subunit;6.35178394986141e-05!GO:0043623;cellular protein complex assembly;6.53328794747587e-05!GO:0050789;regulation of biological process;6.78563302239707e-05!GO:0030029;actin filament-based process;8.13337101837531e-05!GO:0006606;protein import into nucleus;9.16093698896584e-05!GO:0030867;rough endoplasmic reticulum membrane;9.42699479889318e-05!GO:0009165;nucleotide biosynthetic process;0.00010031831524235!GO:0008047;enzyme activator activity;0.000109195102759744!GO:0007010;cytoskeleton organization and biogenesis;0.000109633740859236!GO:0005815;microtubule organizing center;0.000114232486946669!GO:0044262;cellular carbohydrate metabolic process;0.000131817135680337!GO:0016126;sterol biosynthetic process;0.000171146153668346!GO:0042802;identical protein binding;0.000171146153668346!GO:0008632;apoptotic program;0.000177626934216819!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000182818383529476!GO:0033116;ER-Golgi intermediate compartment membrane;0.000187261775521418!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000202895783318541!GO:0065009;regulation of a molecular function;0.000206679028635126!GO:0005819;spindle;0.000212956154018782!GO:0006626;protein targeting to mitochondrion;0.000219952889935725!GO:0043566;structure-specific DNA binding;0.000234660002147534!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000243048662779195!GO:0015980;energy derivation by oxidation of organic compounds;0.00024668781273608!GO:0005905;coated pit;0.000251655516760499!GO:0006613;cotranslational protein targeting to membrane;0.00025829225535382!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000259394927227722!GO:0016859;cis-trans isomerase activity;0.000262721256849184!GO:0005798;Golgi-associated vesicle;0.000295793813234952!GO:0006839;mitochondrial transport;0.000306748803618731!GO:0000786;nucleosome;0.000306748803618731!GO:0003724;RNA helicase activity;0.000321864043860929!GO:0005048;signal sequence binding;0.000331031907781079!GO:0016563;transcription activator activity;0.000349760284401897!GO:0016564;transcription repressor activity;0.000370721207125119!GO:0043681;protein import into mitochondrion;0.00038171707842719!GO:0051427;hormone receptor binding;0.000403388624733572!GO:0051028;mRNA transport;0.000578579658971801!GO:0008361;regulation of cell size;0.000586560870323527!GO:0006695;cholesterol biosynthetic process;0.000602752482793266!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000638599392612914!GO:0016049;cell growth;0.000645402226237397!GO:0008250;oligosaccharyl transferase complex;0.00067421534741186!GO:0030880;RNA polymerase complex;0.000683443390186356!GO:0051087;chaperone binding;0.000690392043373353!GO:0019843;rRNA binding;0.000744172716510724!GO:0048471;perinuclear region of cytoplasm;0.000752401223932363!GO:0046474;glycerophospholipid biosynthetic process;0.000786223437310055!GO:0048522;positive regulation of cellular process;0.000786223437310055!GO:0035257;nuclear hormone receptor binding;0.000822238464002186!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000852423007733612!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000852587928795545!GO:0051920;peroxiredoxin activity;0.0008852844299923!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000891776523077355!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000941562251488438!GO:0015399;primary active transmembrane transporter activity;0.000941562251488438!GO:0001558;regulation of cell growth;0.000949925946040691!GO:0005774;vacuolar membrane;0.000951075818527748!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00100801660413438!GO:0005885;Arp2/3 protein complex;0.00100887776513846!GO:0008033;tRNA processing;0.00100887776513846!GO:0007006;mitochondrial membrane organization and biogenesis;0.00118200223053786!GO:0005684;U2-dependent spliceosome;0.00123488452521293!GO:0030133;transport vesicle;0.00126586665703626!GO:0043021;ribonucleoprotein binding;0.00133543545684111!GO:0018196;peptidyl-asparagine modification;0.00143835754118729!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00143835754118729!GO:0005096;GTPase activator activity;0.00145775445768177!GO:0006414;translational elongation;0.00145775445768177!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.001676571629928!GO:0000428;DNA-directed RNA polymerase complex;0.001676571629928!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00170783160774721!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00170783160774721!GO:0006612;protein targeting to membrane;0.00170783160774721!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00174324157826275!GO:0007265;Ras protein signal transduction;0.00186290017638945!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0019502693686708!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0019502693686708!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0019502693686708!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00206386060526559!GO:0046467;membrane lipid biosynthetic process;0.00206904329291262!GO:0006778;porphyrin metabolic process;0.00212090851083793!GO:0033013;tetrapyrrole metabolic process;0.00212090851083793!GO:0046489;phosphoinositide biosynthetic process;0.00214429341070741!GO:0008610;lipid biosynthetic process;0.00214429341070741!GO:0004576;oligosaccharyl transferase activity;0.00228819147785259!GO:0007242;intracellular signaling cascade;0.00238234778749524!GO:0005874;microtubule;0.00242267767209197!GO:0005765;lysosomal membrane;0.00255368249262765!GO:0008186;RNA-dependent ATPase activity;0.0025862722274135!GO:0044437;vacuolar part;0.00285228308110938!GO:0006818;hydrogen transport;0.00291593656716954!GO:0006740;NADPH regeneration;0.00291946102928942!GO:0006098;pentose-phosphate shunt;0.00291946102928942!GO:0006897;endocytosis;0.00293257634921617!GO:0010324;membrane invagination;0.00293257634921617!GO:0015992;proton transport;0.00295770427540791!GO:0030027;lamellipodium;0.00296256661306447!GO:0003684;damaged DNA binding;0.00301537063211443!GO:0030176;integral to endoplasmic reticulum membrane;0.003180945130406!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0032095369439922!GO:0015002;heme-copper terminal oxidase activity;0.0032095369439922!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0032095369439922!GO:0004129;cytochrome-c oxidase activity;0.0032095369439922!GO:0007051;spindle organization and biogenesis;0.00337828396858346!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00346788378757785!GO:0000075;cell cycle checkpoint;0.00346788378757785!GO:0001726;ruffle;0.00350695882545063!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00355765579562041!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00363291944893331!GO:0051789;response to protein stimulus;0.00363876818358339!GO:0006986;response to unfolded protein;0.00363876818358339!GO:0008139;nuclear localization sequence binding;0.00367165223061989!GO:0048487;beta-tubulin binding;0.00367165223061989!GO:0008094;DNA-dependent ATPase activity;0.00368606082664318!GO:0031902;late endosome membrane;0.00371786543318393!GO:0030658;transport vesicle membrane;0.00373927753892209!GO:0030041;actin filament polymerization;0.00389653784128331!GO:0017166;vinculin binding;0.00394552367528458!GO:0031324;negative regulation of cellular metabolic process;0.0043556714187108!GO:0005791;rough endoplasmic reticulum;0.00439258980699252!GO:0007040;lysosome organization and biogenesis;0.00451210458055052!GO:0006261;DNA-dependent DNA replication;0.00462940873293102!GO:0031072;heat shock protein binding;0.004634286373998!GO:0006509;membrane protein ectodomain proteolysis;0.00466661101036293!GO:0033619;membrane protein proteolysis;0.00466661101036293!GO:0042168;heme metabolic process;0.00477645581091139!GO:0009967;positive regulation of signal transduction;0.00505273529191529!GO:0000775;chromosome, pericentric region;0.00519901955477259!GO:0044452;nucleolar part;0.0052110232001805!GO:0030132;clathrin coat of coated pit;0.00526011028991328!GO:0005657;replication fork;0.00526011028991328!GO:0006650;glycerophospholipid metabolic process;0.00534270896446357!GO:0043488;regulation of mRNA stability;0.00539416289006294!GO:0043487;regulation of RNA stability;0.00539416289006294!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00540612033683581!GO:0016301;kinase activity;0.00546442505978348!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00562691507550069!GO:0008092;cytoskeletal protein binding;0.00569620785742436!GO:0003729;mRNA binding;0.00586812100345139!GO:0030118;clathrin coat;0.00623105504685761!GO:0004004;ATP-dependent RNA helicase activity;0.00625591386858153!GO:0043284;biopolymer biosynthetic process;0.00627845602868533!GO:0016272;prefoldin complex;0.00646845957373118!GO:0032508;DNA duplex unwinding;0.00677109296437009!GO:0032392;DNA geometric change;0.00677109296437009!GO:0006779;porphyrin biosynthetic process;0.00677109296437009!GO:0033014;tetrapyrrole biosynthetic process;0.00677109296437009!GO:0000059;protein import into nucleus, docking;0.00685070581917858!GO:0030659;cytoplasmic vesicle membrane;0.00697006855540999!GO:0065007;biological regulation;0.00717154738008531!GO:0006497;protein amino acid lipidation;0.00751958233077211!GO:0050790;regulation of catalytic activity;0.0076998005490803!GO:0006383;transcription from RNA polymerase III promoter;0.00771810637172453!GO:0051540;metal cluster binding;0.00780126844617827!GO:0051536;iron-sulfur cluster binding;0.00780126844617827!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00781828811700837!GO:0006402;mRNA catabolic process;0.00781828811700837!GO:0043492;ATPase activity, coupled to movement of substances;0.00799978683787752!GO:0006950;response to stress;0.00800158758231669!GO:0004674;protein serine/threonine kinase activity;0.00828857612552339!GO:0046483;heterocycle metabolic process;0.0083274364145446!GO:0005637;nuclear inner membrane;0.00837352859852503!GO:0051168;nuclear export;0.00842170981867475!GO:0030134;ER to Golgi transport vesicle;0.00844896035765733!GO:0008154;actin polymerization and/or depolymerization;0.00850690750570106!GO:0006401;RNA catabolic process;0.00851671094883298!GO:0009892;negative regulation of metabolic process;0.00860441648541829!GO:0006891;intra-Golgi vesicle-mediated transport;0.00866614171468526!GO:0015036;disulfide oxidoreductase activity;0.00870517224010494!GO:0006289;nucleotide-excision repair;0.0087092302682287!GO:0051252;regulation of RNA metabolic process;0.00895436380518028!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00939617186906112!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00957262837098346!GO:0016197;endosome transport;0.00957819324700203!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00961039267603123!GO:0007050;cell cycle arrest;0.00962700024143645!GO:0003678;DNA helicase activity;0.0097788660087485!GO:0016363;nuclear matrix;0.00980986593369826!GO:0022890;inorganic cation transmembrane transporter activity;0.00981516001390574!GO:0030660;Golgi-associated vesicle membrane;0.00991111283513483!GO:0050662;coenzyme binding;0.00994359836750301!GO:0019887;protein kinase regulator activity;0.00995110939567435!GO:0005083;small GTPase regulator activity;0.0101472806980542!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0101676407303232!GO:0006595;polyamine metabolic process;0.0102179505997986!GO:0007033;vacuole organization and biogenesis;0.0102739334703882!GO:0044433;cytoplasmic vesicle part;0.0104159735125667!GO:0000082;G1/S transition of mitotic cell cycle;0.0105894520177002!GO:0035258;steroid hormone receptor binding;0.0108813218782799!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0111770370982372!GO:0006643;membrane lipid metabolic process;0.0113626699506639!GO:0006268;DNA unwinding during replication;0.0113626699506639!GO:0006979;response to oxidative stress;0.0114817850760494!GO:0051287;NAD binding;0.0117948894903553!GO:0030384;phosphoinositide metabolic process;0.0123979327848459!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0124168593580618!GO:0006739;NADP metabolic process;0.0124801039710541!GO:0015631;tubulin binding;0.0127617435073085!GO:0033673;negative regulation of kinase activity;0.0129948406502913!GO:0006469;negative regulation of protein kinase activity;0.0129948406502913!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.013110562562081!GO:0051348;negative regulation of transferase activity;0.013110562562081!GO:0007088;regulation of mitosis;0.0133907007120964!GO:0040008;regulation of growth;0.0138040134243913!GO:0008637;apoptotic mitochondrial changes;0.014380772577653!GO:0006783;heme biosynthetic process;0.0148248895773209!GO:0030127;COPII vesicle coat;0.0149030040612151!GO:0012507;ER to Golgi transport vesicle membrane;0.0149030040612151!GO:0030119;AP-type membrane coat adaptor complex;0.0149163785247063!GO:0048500;signal recognition particle;0.0152906115559844!GO:0051101;regulation of DNA binding;0.0154014955278517!GO:0005758;mitochondrial intermembrane space;0.0156712422977011!GO:0043281;regulation of caspase activity;0.0156735835294852!GO:0008243;plasminogen activator activity;0.0160431400951198!GO:0006506;GPI anchor biosynthetic process;0.0163226302836183!GO:0000096;sulfur amino acid metabolic process;0.0163226302836183!GO:0004518;nuclease activity;0.016419517014382!GO:0031970;organelle envelope lumen;0.0167113967675477!GO:0030663;COPI coated vesicle membrane;0.0167115145850728!GO:0030126;COPI vesicle coat;0.0167115145850728!GO:0030308;negative regulation of cell growth;0.0170374084136201!GO:0005869;dynactin complex;0.0171315420499632!GO:0019206;nucleoside kinase activity;0.0171650275673188!GO:0045792;negative regulation of cell size;0.0171810317453568!GO:0031272;regulation of pseudopodium formation;0.0174527576562155!GO:0031269;pseudopodium formation;0.0174527576562155!GO:0031344;regulation of cell projection organization and biogenesis;0.0174527576562155!GO:0031268;pseudopodium organization and biogenesis;0.0174527576562155!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0174527576562155!GO:0031274;positive regulation of pseudopodium formation;0.0174527576562155!GO:0004860;protein kinase inhibitor activity;0.0175328245083993!GO:0046519;sphingoid metabolic process;0.0177045760074195!GO:0006458;'de novo' protein folding;0.0177714537729307!GO:0051084;'de novo' posttranslational protein folding;0.0177714537729307!GO:0000209;protein polyubiquitination;0.0177741771264429!GO:0005099;Ras GTPase activator activity;0.0179024790550211!GO:0001953;negative regulation of cell-matrix adhesion;0.0180963189790544!GO:0022408;negative regulation of cell-cell adhesion;0.0181268411863576!GO:0042158;lipoprotein biosynthetic process;0.0181300664401271!GO:0009966;regulation of signal transduction;0.0182250509937906!GO:0003711;transcription elongation regulator activity;0.0183621829275784!GO:0006790;sulfur metabolic process;0.0183684631391343!GO:0007266;Rho protein signal transduction;0.0183684631391343!GO:0003756;protein disulfide isomerase activity;0.0185748671437094!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0185748671437094!GO:0004177;aminopeptidase activity;0.018775809519237!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.018775809519237!GO:0019207;kinase regulator activity;0.0188555586929724!GO:0033559;unsaturated fatty acid metabolic process;0.0197810354310078!GO:0006636;unsaturated fatty acid biosynthetic process;0.0197810354310078!GO:0035035;histone acetyltransferase binding;0.0198275854227468!GO:0006644;phospholipid metabolic process;0.0205653866532599!GO:0006733;oxidoreduction coenzyme metabolic process;0.0207903886344922!GO:0012506;vesicle membrane;0.0210330343429048!GO:0007162;negative regulation of cell adhesion;0.021041235315768!GO:0000287;magnesium ion binding;0.0211755785235485!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0211814866718671!GO:0030833;regulation of actin filament polymerization;0.0213451278508648!GO:0009116;nucleoside metabolic process;0.0215729920801921!GO:0048660;regulation of smooth muscle cell proliferation;0.0217107847026388!GO:0030031;cell projection biogenesis;0.021711834132529!GO:0016125;sterol metabolic process;0.0218646421830394!GO:0045045;secretory pathway;0.0222742514942752!GO:0030131;clathrin adaptor complex;0.0223732183633027!GO:0006220;pyrimidine nucleotide metabolic process;0.0225134775412167!GO:0030137;COPI-coated vesicle;0.0225325228578544!GO:0006505;GPI anchor metabolic process;0.0230162677326463!GO:0030913;paranodal junction assembly;0.0230430811963897!GO:0032288;myelin formation;0.0230430811963897!GO:0030695;GTPase regulator activity;0.0230707499165847!GO:0005862;muscle thin filament tropomyosin;0.0232305467247413!GO:0031901;early endosome membrane;0.0234248041126837!GO:0008538;proteasome activator activity;0.0234248041126837!GO:0030145;manganese ion binding;0.0234465370498056!GO:0030125;clathrin vesicle coat;0.0237761463327485!GO:0030665;clathrin coated vesicle membrane;0.0237761463327485!GO:0000049;tRNA binding;0.0248174205293307!GO:0048468;cell development;0.0252324556158455!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0252929962791177!GO:0010257;NADH dehydrogenase complex assembly;0.0252929962791177!GO:0033108;mitochondrial respiratory chain complex assembly;0.0252929962791177!GO:0006118;electron transport;0.0261202995560757!GO:0005100;Rho GTPase activator activity;0.0261464568558465!GO:0043433;negative regulation of transcription factor activity;0.0272296993985556!GO:0031625;ubiquitin protein ligase binding;0.0277333229730814!GO:0043189;H4/H2A histone acetyltransferase complex;0.0278238976651413!GO:0000123;histone acetyltransferase complex;0.0280779580783488!GO:0051539;4 iron, 4 sulfur cluster binding;0.0282375217828854!GO:0006672;ceramide metabolic process;0.0283786668528741!GO:0008320;protein transmembrane transporter activity;0.0286435187820813!GO:0008312;7S RNA binding;0.028731487280754!GO:0004003;ATP-dependent DNA helicase activity;0.0292353834361379!GO:0005832;chaperonin-containing T-complex;0.029648138678086!GO:0045941;positive regulation of transcription;0.0297210383832771!GO:0007021;tubulin folding;0.0299408716069929!GO:0005092;GDP-dissociation inhibitor activity;0.0309962948246288!GO:0048518;positive regulation of biological process;0.0311721574466944!GO:0006007;glucose catabolic process;0.0314965882027517!GO:0031529;ruffle organization and biogenesis;0.0315832252053914!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0315976315548309!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0316297824809249!GO:0045047;protein targeting to ER;0.0316297824809249!GO:0019222;regulation of metabolic process;0.0316297824809249!GO:0030508;thiol-disulfide exchange intermediate activity;0.0319478191450959!GO:0007346;regulation of progression through mitotic cell cycle;0.0319502527893286!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0321029742267035!GO:0030521;androgen receptor signaling pathway;0.0321472209615388!GO:0006082;organic acid metabolic process;0.0332169704897063!GO:0030433;ER-associated protein catabolic process;0.0335514617493251!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0335514617493251!GO:0050178;phenylpyruvate tautomerase activity;0.0336209062575533!GO:0009124;nucleoside monophosphate biosynthetic process;0.034281985968734!GO:0009123;nucleoside monophosphate metabolic process;0.034281985968734!GO:0051128;regulation of cellular component organization and biogenesis;0.0348052693467926!GO:0022415;viral reproductive process;0.034910147129892!GO:0008022;protein C-terminus binding;0.0350227334861335!GO:0006352;transcription initiation;0.0353692258265514!GO:0040011;locomotion;0.0356290266313232!GO:0035267;NuA4 histone acetyltransferase complex;0.0356290266313232!GO:0043086;negative regulation of catalytic activity;0.0356290266313232!GO:0045926;negative regulation of growth;0.0358846347852276!GO:0007044;cell-substrate junction assembly;0.0359493967729482!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0359493967729482!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0364331601303409!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0365893531280988!GO:0051098;regulation of binding;0.0368802931029634!GO:0019752;carboxylic acid metabolic process;0.0373493596393471!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0373943123826699!GO:0005652;nuclear lamina;0.0377832561135009!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0378172260708865!GO:0006302;double-strand break repair;0.0378326386061568!GO:0030032;lamellipodium biogenesis;0.0380878017265298!GO:0004448;isocitrate dehydrogenase activity;0.0381151343479663!GO:0019904;protein domain specific binding;0.0382428522286401!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0385734590324647!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.039582302442228!GO:0008629;induction of apoptosis by intracellular signals;0.039582302442228!GO:0006807;nitrogen compound metabolic process;0.0397593644743878!GO:0001568;blood vessel development;0.0397593644743878!GO:0006919;caspase activation;0.0398604500520597!GO:0007093;mitotic cell cycle checkpoint;0.0403745824436307!GO:0005975;carbohydrate metabolic process;0.0408515362920524!GO:0007034;vacuolar transport;0.0408515362920524!GO:0030911;TPR domain binding;0.0409917530184862!GO:0019210;kinase inhibitor activity;0.0414288905055904!GO:0006310;DNA recombination;0.0414288905055904!GO:0051336;regulation of hydrolase activity;0.0414288905055904!GO:0043065;positive regulation of apoptosis;0.0414758918345377!GO:0030496;midbody;0.0416273934147166!GO:0006611;protein export from nucleus;0.0417701255200593!GO:0016407;acetyltransferase activity;0.0419887333624391!GO:0007017;microtubule-based process;0.0419887333624391!GO:0051085;chaperone cofactor-dependent protein folding;0.0421635673216098!GO:0000118;histone deacetylase complex;0.0422404908362638!GO:0051059;NF-kappaB binding;0.0422404908362638!GO:0016481;negative regulation of transcription;0.0424033610833476!GO:0000339;RNA cap binding;0.042445139005182!GO:0031301;integral to organelle membrane;0.0426000698822493!GO:0003746;translation elongation factor activity;0.0429322572298468!GO:0001836;release of cytochrome c from mitochondria;0.0434569904600532!GO:0016860;intramolecular oxidoreductase activity;0.0439432764704742!GO:0051270;regulation of cell motility;0.0442017103011717!GO:0016408;C-acyltransferase activity;0.0443109649971908!GO:0043022;ribosome binding;0.0444717284110542!GO:0006520;amino acid metabolic process;0.0449088296391955!GO:0003682;chromatin binding;0.0454349322689842!GO:0009303;rRNA transcription;0.046348630851806!GO:0043068;positive regulation of programmed cell death;0.0464544555140824!GO:0016311;dephosphorylation;0.0466603030317502!GO:0051775;response to redox state;0.0469900752930279!GO:0006980;redox signal response;0.0469900752930279!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0477973066865354!GO:0001944;vasculature development;0.0483048679677101!GO:0009112;nucleobase metabolic process;0.0490611955113483!GO:0016741;transferase activity, transferring one-carbon groups;0.049215391508988
|sample_id=11594
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=kidney
|top_motifs=RXR{A,B,G}:1.57600352229;SOX{8,9,10}:1.57211076323;FOX{I1,J2}:1.34806270059;TLX1..3_NFIC{dimer}:1.1999240905;NR5A1,2:1.10724659055;ESRRA:1.01952809194;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.924176339997;XCPE1{core}:0.879081520807;PBX1:0.850265443343;HES1:0.822329785222;TP53:0.81965961958;AR:0.815411399944;GZF1:0.813084678989;bHLH_family:0.792662324373;TFAP2{A,C}:0.781003565507;NFATC1..3:0.729677065604;IKZF2:0.694342242277;ZNF148:0.644920580131;ZNF423:0.632737329131;PAX6:0.63113124046;ETS1,2:0.622408174269;ZBTB6:0.615387845416;IKZF1:0.59494966802;ONECUT1,2:0.594106530229;ARID5B:0.587443219429;GATA6:0.554456113461;EBF1:0.534536371791;TFAP4:0.530027179514;ZIC1..3:0.516453904274;LEF1_TCF7_TCF7L1,2:0.431945780217;PAX1,9:0.412751625503;GFI1:0.381397600587;SPZ1:0.374456839316;SPIB:0.369946370739;ELF1,2,4:0.335839296194;HIC1:0.321331230977;GTF2A1,2:0.306082388809;HNF4A_NR2F1,2:0.299933673908;NR3C1:0.295157113094;STAT2,4,6:0.294776226553;UFEwm:0.276877925548;TFCP2:0.269511077546;FOXL1:0.265509068224;SMAD1..7,9:0.261281480998;FOXQ1:0.240697781771;SOX2:0.229130196357;TFDP1:0.225351086286;NFE2:0.224367582991;BACH2:0.20956789795;PAX5:0.206375696052;SP1:0.190297731694;HOX{A5,B5}:0.1683220296;MYB:0.159756065776;NFY{A,B,C}:0.158151128123;NKX2-3_NKX2-5:0.154588075805;GFI1B:0.142544709807;REST:0.141967886908;TEAD1:0.140678803105;MYOD1:0.139939430435;TFAP2B:0.139105079824;ALX1:0.13391497049;TAL1_TCF{3,4,12}:0.107589386772;POU6F1:0.102318512931;POU1F1:0.097754671899;ZFP161:0.0974918172206;CRX:0.0807354421814;FOSL2:0.0577245303374;PPARG:0.0541447042705;GLI1..3:0.0529404192664;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0481499410147;PITX1..3:0.0446883358;MTE{core}:0.0420437209802;SOX5:0.0380142152484;RXRA_VDR{dimer}:0.0359881934358;HAND1,2:0.0355259593882;SOX17:0.0332183218369;FOXD3:0.0285238692883;FOXM1:0.0242815602937;NFE2L1:0.0205839225658;FOS_FOS{B,L1}_JUN{B,D}:0.016139528686;SPI1:0.0132012182595;LMO2:-0.00120530927897;POU3F1..4:-0.0116409606495;ZNF238:-0.0154768797809;PAX8:-0.0336167817667;NFE2L2:-0.0386265834985;RBPJ:-0.0621718622801;E2F1..5:-0.0699375700785;YY1:-0.0740102580611;NKX2-2,8:-0.10663298335;ESR1:-0.121429226595;ZNF143:-0.160272903152;SRF:-0.162458028907;NRF1:-0.169187576705;MTF1:-0.169343874324;LHX3,4:-0.172892669471;TBP:-0.173388855641;NFKB1_REL_RELA:-0.174891228901;NANOG:-0.181719040331;POU2F1..3:-0.184275748155;HBP1_HMGB_SSRP1_UBTF:-0.204073979929;GATA4:-0.209117841441;NANOG{mouse}:-0.209949234722;ADNP_IRX_SIX_ZHX:-0.255627473543;HNF1A:-0.263077363344;HOX{A6,A7,B6,B7}:-0.270087380905;MED-1{core}:-0.284110994256;HOXA9_MEIS1:-0.286306823705;MEF2{A,B,C,D}:-0.306582891878;PAX2:-0.309033190841;NR6A1:-0.31806898182;RFX1:-0.318941287375;CUX2:-0.334059919108;EP300:-0.342644721119;KLF4:-0.345906704382;DMAP1_NCOR{1,2}_SMARC:-0.347798443824;SNAI1..3:-0.354765997941;GTF2I:-0.356541635116;NHLH1,2:-0.359583207422;IRF1,2:-0.377359386337;EN1,2:-0.403614819532;NKX3-2:-0.405926027778;PATZ1:-0.415430454242;GCM1,2:-0.437778826057;RORA:-0.440028108598;RREB1:-0.453864412755;VSX1,2:-0.460398800524;MZF1:-0.469783903428;ATF6:-0.47826436448;XBP1:-0.479566695747;CDC5L:-0.497132329788;CREB1:-0.504421727786;POU5F1:-0.508170962328;ALX4:-0.517457283847;HMX1:-0.532825702603;ATF2:-0.535213879084;MAZ:-0.540973446211;TBX4,5:-0.54240286306;FOX{D1,D2}:-0.545707981404;FOXP3:-0.552534883022;PAX3,7:-0.568587265608;SREBF1,2:-0.582843130396;EGR1..3:-0.585592415172;EVI1:-0.591514152493;HLF:-0.59192055851;FOXP1:-0.598451574871;T:-0.601839873681;STAT5{A,B}:-0.607131385182;FOX{F1,F2,J1}:-0.609332613791;PRRX1,2:-0.615477617409;PRDM1:-0.6402763675;FOXA2:-0.650958075079;MAFB:-0.661376964682;CEBPA,B_DDIT3:-0.666203612124;TEF:-0.66677032218;RUNX1..3:-0.678957939995;OCT4_SOX2{dimer}:-0.698507126059;JUN:-0.712438192977;TOPORS:-0.727119191309;AIRE:-0.740634552995;NR1H4:-0.742125150067;BREu{core}:-0.743464800925;STAT1,3:-0.754942755922;PAX4:-0.782607045816;ZEB1:-0.821674065898;BPTF:-0.823777314652;NFIX:-0.845952550982;DBP:-0.857003514708;MYFfamily:-0.858551312261;IRF7:-0.860559122657;TGIF1:-0.882878957599;NKX2-1,4:-0.889998793847;ELK1,4_GABP{A,B1}:-0.890117565456;PDX1:-0.901384617687;HIF1A:-0.93103711131;MYBL2:-0.94150022366;AHR_ARNT_ARNT2:-0.949198149985;HOX{A4,D4}:-0.966599382514;HSF1,2:-1.00074760399;TLX2:-1.0057655062;NKX3-1:-1.01515640604;FOXO1,3,4:-1.05044042253;ZNF384:-1.05462669012;HMGA1,2:-1.07748084921;ATF5_CREB3:-1.08056681357;ZBTB16:-1.10967361699;NFIL3:-1.17368568773;RFX2..5_RFXANK_RFXAP:-1.18863492257;CDX1,2,4:-1.23547450452;FOXN1:-1.24824640502;ATF4:-1.26839056193;NKX6-1,2:-1.44823188906
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11594-120H1;search_select_hide=table117:FF:11594-120H1
}}
}}

Latest revision as of 18:10, 4 June 2020

Name:Renal Glomerular Endothelial Cells, donor2
Species:Human (Homo sapiens)
Library ID:CNhs12086
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuekidney
dev stageNA
sexNA
ageNA
cell typeendothelial cell
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberlot:sc1101
catalog numberSC4005
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004840
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12086 CAGE DRX008431 DRR009303
Accession ID Hg19

Library idBAMCTSS
CNhs12086 DRZ000728 DRZ002113
Accession ID Hg38

Library idBAMCTSS
CNhs12086 DRZ012078 DRZ013463
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004840
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10004.GATCAG sRNA-Seq DRX037039 DRR041405
Accession ID Hg19

Library idBAMCTSS
SRhi10004.GATCAG DRZ007047


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.00395
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0238
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen1.196
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.403
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0579
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.371
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.141
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.065
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0545
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.476
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.399
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0211
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.66
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.0682
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12086

Jaspar motifP-value
MA0002.20.444
MA0003.10.283
MA0004.10.457
MA0006.10.198
MA0007.10.0228
MA0009.10.445
MA0014.10.781
MA0017.10.0997
MA0018.25.77821e-5
MA0019.10.0968
MA0024.10.376
MA0025.10.158
MA0027.10.694
MA0028.10.198
MA0029.10.389
MA0030.10.0407
MA0031.10.0132
MA0035.20.0031
MA0038.10.326
MA0039.20.325
MA0040.10.113
MA0041.10.145
MA0042.10.549
MA0043.14.76507e-9
MA0046.10.354
MA0047.20.33
MA0048.10.173
MA0050.10.192
MA0051.10.878
MA0052.10.981
MA0055.10.0324
MA0057.10.325
MA0058.10.274
MA0059.10.246
MA0060.10.0286
MA0061.10.737
MA0062.20.0366
MA0065.20.0524
MA0066.10.316
MA0067.10.113
MA0068.10.764
MA0069.10.106
MA0070.10.0816
MA0071.10.0225
MA0072.10.824
MA0073.10.58
MA0074.10.46
MA0076.10.00271
MA0077.10.00104
MA0078.10.0763
MA0079.20.368
MA0080.20.0119
MA0081.10.299
MA0083.10.612
MA0084.10.728
MA0087.10.988
MA0088.10.341
MA0090.10.453
MA0091.10.537
MA0092.10.902
MA0093.10.434
MA0099.28.22807e-8
MA0100.10.208
MA0101.10.546
MA0102.22.64129e-5
MA0103.10.789
MA0104.20.959
MA0105.10.607
MA0106.10.0039
MA0107.10.65
MA0108.20.776
MA0111.10.962
MA0112.20.176
MA0113.10.109
MA0114.10.331
MA0115.10.938
MA0116.10.439
MA0117.10.144
MA0119.10.0423
MA0122.10.179
MA0124.10.707
MA0125.10.809
MA0131.10.337
MA0135.10.435
MA0136.10.448
MA0137.20.112
MA0138.20.286
MA0139.10.178
MA0140.10.084
MA0141.14.63689e-4
MA0142.10.83
MA0143.10.991
MA0144.10.245
MA0145.10.127
MA0146.10.0952
MA0147.10.722
MA0148.10.0587
MA0149.10.0564
MA0150.10.146
MA0152.10.835
MA0153.10.363
MA0154.10.215
MA0155.10.0367
MA0156.10.433
MA0157.10.178
MA0159.10.08
MA0160.10.0667
MA0162.10.0457
MA0163.10.159
MA0164.10.576
MA0258.10.456
MA0259.10.679



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12086

Novel motifP-value
10.413
100.849
1000.497
1010.174
1020.577
1030.628
1040.994
1050.811
1060.226
1070.0438
1080.295
1090.092
110.0254
1100.0192
1110.275
1120.259
1130.829
1140.333
1150.564
1160.447
1170.52
1180.275
1190.31
120.319
1200.0215
1210.761
1220.994
1230.0704
1240.185
1250.833
1260.675
1270.984
1280.45
1290.0691
130.247
1300.991
1310.0956
1320.108
1330.498
1340.867
1350.0567
1360.101
1370.447
1380.992
1390.793
140.981
1400.3
1410.518
1420.908
1430.0872
1440.407
1450.291
1460.35
1470.163
1480.328
1490.036
150.676
1500.233
1510.661
1520.0631
1530.066
1540.321
1550.836
1560.194
1570.508
1580.453
1590.327
160.65
1600.00593
1610.701
1620.248
1630.701
1640.419
1650.369
1660.0765
1670.202
1680.343
1690.0334
170.112
180.853
190.161
20.351
200.611
210.663
220.097
230.23
240.708
250.72
260.168
270.114
280.254
290.502
30.567
300.826
310.911
320.866
330.348
340.0424
350.873
360.0768
370.166
380.237
390.284
40.927
400.00422
410.0456
420.668
430.417
440.281
450.274
460.162
470.228
480.0374
490.796
50.967
500.452
510.37
520.696
530.779
540.536
550.759
560.478
570.31
580.412
590.0236
60.458
600.785
610.562
620.859
630.261
640.161
650.103
660.526
670.373
680.0802
690.343
70.724
700.681
710.336
720.454
730.00962
740.478
750.157
760.434
770.0311
780.551
790.101
80.0159
800.764
810.596
820.609
830.949
840.112
850.371
860.95
870.096
880.757
890.157
90.311
900.191
910.38
920.441
930.292
940.832
950.0139
960.521
970.977
980.279
990.00786



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12086


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000666 (fenestrated cell)
1000746 (glomerular cell)
1000497 (kidney cell)
0002518 (kidney epithelial cell)
0002681 (kidney cortical cell)
1000449 (epithelial cell of nephron)
0002584 (renal cortical epithelial cell)
1000612 (kidney corpuscule cell)
0002188 (glomerular endothelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002113 (kidney)
0002100 (trunk)
0000483 (epithelium)
0001851 (cortex)
0000479 (tissue)
0000064 (organ part)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0006555 (excretory tube)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003103 (compound organ)
0009569 (subdivision of trunk)
0000489 (cavitated compound organ)
0000353 (parenchyma)
0005177 (trunk region element)
0005172 (abdomen element)
0010317 (germ layer / neural crest derived structure)
0004819 (kidney epithelium)
0005173 (abdominal segment element)
0001285 (nephron)
0000074 (renal glomerulus)
0001225 (cortex of kidney)
0001229 (renal corpuscle)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0008987 (renal parenchyma)
0007684 (uriniferous tubule)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000153 (human renal glomerular endothelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)

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