Personal tools

FFCP PHASE1:Mm9::chr10:102830326..102830381,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=103098
|EntrezGene=103098
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BG16
|UniProt=Q8BG16
|association_with_transcript=-60bp_to_NM_001252330,NM_175328_5end
|association_with_transcript=-60bp_to_NM_001252330,NM_175328_5end
|cluster_id=chr10:102830326..102830381,+
|description=CAGE_peak_2_at_Slc6a15_5end
|description=CAGE_peak_2_at_Slc6a15_5end
|id=chr10:102830326..102830381,+
|id=chr10:102830326..102830381,+
|ontology_enrichment_celltype=CL:0000540!1.75e-15!33;CL:0000047!1.75e-15!33;CL:0000031!1.75e-15!33;CL:0000404!1.75e-15!33;CL:0000221!1.80e-13!44;CL:0000133!1.80e-13!44;CL:0002319!5.03e-13!43;CL:0000393!1.43e-11!39;CL:0000211!1.43e-11!39;CL:0000117!1.14e-10!23;CL:0000337!1.14e-10!23;CL:0000055!1.49e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.20e-18,33;CL:0000047,1.20e-18,33;CL:0000031,1.20e-18,33;CL:0000404,1.20e-18,33;CL:0000221,2.85e-16,44;CL:0000133,2.85e-16,44;CL:0002319,1.11e-15,43;CL:0000393,5.74e-14,39;CL:0000211,5.74e-14,39;CL:0000117,3.81e-13,23;CL:0000337,3.81e-13,23;CL:0000107,1.15e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.31e-32!102;UBERON:0000924!1.31e-32!102;UBERON:0006601!1.31e-32!102;UBERON:0002346!1.00e-30!71;UBERON:0003075!1.00e-30!71;UBERON:0007284!1.00e-30!71;UBERON:0000073!1.26e-29!75;UBERON:0001016!1.26e-29!75;UBERON:0001017!3.96e-29!73;UBERON:0005743!3.96e-29!73;UBERON:0000033!9.34e-25!63;UBERON:0001049!4.19e-22!52;UBERON:0005068!4.19e-22!52;UBERON:0006241!4.19e-22!52;UBERON:0007135!4.19e-22!52;UBERON:0000955!6.56e-21!50;UBERON:0006238!6.56e-21!50;UBERON:0002616!2.45e-20!49;UBERON:0003056!4.56e-20!49;UBERON:0002020!1.73e-17!34;UBERON:0003080!3.53e-16!40;UBERON:0002780!1.50e-15!39;UBERON:0001890!1.50e-15!39;UBERON:0006240!1.50e-15!39;UBERON:0002791!1.56e-14!29;UBERON:0003528!1.56e-14!29;UBERON:0001893!1.56e-14!29;UBERON:0007811!7.12e-11!86;UBERON:0000956!1.95e-10!21;UBERON:0001869!1.95e-10!21;UBERON:0000203!1.95e-10!21;UBERON:0000153!1.96e-09!94;UBERON:0002619!7.29e-09!17;UBERON:0002021!5.62e-08!10;UBERON:0000411!5.62e-08!10;UBERON:0001950!5.62e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.21e-36,95;UBERON:0000924,9.21e-36,95;UBERON:0006601,9.21e-36,95;UBERON:0002346,9.26e-36,64;UBERON:0003075,9.26e-36,64;UBERON:0007284,9.26e-36,64;UBERON:0001017,1.67e-35,73;UBERON:0001016,2.92e-35,75;UBERON:0010371,6.51e-30,73;UBERON:0000073,2.07e-29,54;UBERON:0001049,1.36e-27,52;UBERON:0005068,1.36e-27,52;UBERON:0006241,1.36e-27,52;UBERON:0007135,1.36e-27,52;UBERON:0010314,1.39e-26,92;UBERON:0003056,1.77e-24,49;UBERON:0002020,1.49e-23,34;UBERON:0000955,3.17e-23,47;UBERON:0006238,3.17e-23,47;UBERON:0002616,1.76e-22,46;UBERON:0003528,1.53e-19,29;UBERON:0002791,1.53e-19,29;UBERON:0001893,1.53e-19,29;UBERON:0003080,2.78e-19,40;UBERON:0002780,1.86e-18,39;UBERON:0001890,1.86e-18,39;UBERON:0006240,1.86e-18,39;UBERON:0000956,5.50e-14,21;UBERON:0001869,5.50e-14,21;UBERON:0000203,5.50e-14,21;UBERON:0002619,7.29e-12,17;UBERON:0002021,3.10e-10,10;UBERON:0000411,3.10e-10,10;UBERON:0001950,3.10e-10,10;UBERON:0003076,7.51e-09,12;UBERON:0003057,7.51e-09,12;UBERON:0002410,1.15e-07,9;UBERON:0000010,5.10e-07,11;UBERON:0002420,9.47e-07,8;UBERON:0007245,9.47e-07,8;UBERON:0010009,9.47e-07,8;UBERON:0010011,9.47e-07,8;UBERON:0000454,9.47e-07,8
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,2.39827672018491,0,2.3331587888914,0.55994568650145,1.43752564364972,0,0.725362142011344,0.336093799142464,0,0.286533439938757,0,1.21389876515759,2.64495489636016,0.633831403506179,0.338844532069132,0,0,0,0,0,0,2.28117147078651,2.16009501330705,1.89292465216244,8.56952953211411,7.50953039235486,1.95985278743926,1.62937300731002,1.83843757322004,8.8092704799511,12.7687338085188,19.6616362567992,2.2420668914133,2.92760459527711,3.64639359389732,7.81712397203867,9.00420176050688,8.40390362772456,8.83885756421003,12.5287079103211,4.47358669980721,0.908714319998209,2.19157524309678,0,0,0,0,0,0,0.983110940922263,0,0,0,3.38024207464033,0,0,0,0,0.253359865475099,0,0.22836775943812,0,4.30482203287992,1.21439728736295,1.82679286987285,1.61430848079241,2.86373017049983,1.52865319276416,2.26199864393416,0.494389935468748,0.433798070759735,0.884610551949874,0.647067399789637,0,0.969750506270444,0,10.2473278954042,9.42510180660548,0,0,0,0,9.43681028250383,16.0125210986519,4.39790232395025,16.5133104182663,7.67146371990992,8.3115217823824,9.89671704713322,0.81471491080253,0.373220911830279,1.0108910337347,2.94618598241064,2.60240885925407,1.60931473103431,4.14142898552303,2.86339153887859,2.9255694635071,3.71529788826064,2.15513966487376,6.98499100995342,0,0,0.703804496655795,0.219195732427575,0.278047249225598,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0.493679549740441,0.164167464079095,0,0,0,0.134206418760372,16.1923260394378,7.71784592844633,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.605050573870028,0.444756087689741,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0.199141273254367,0.569003702859245,1.14248512609729,2.25415471346161,2.03651327845314,2.32742984601151,1.1221731182451,3.03535378196435,3.54264355151045,2.66897837330337,2.22114895059241,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0.189491411770485,0.488894929326078,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,14.2890025089135,12.0728037189969,0.491804836130026,0,7.2566890465739,4.68526493155966,9.26320610251035,4.54040716109849,3.34198011123591,5.37845408498782,6.8817819284732,8.47541987942804,11.8586333383957,7.06906896127976,2.12910127812403,0.35613120733451,0.488660878060728,1.31976098378028,2.65490276679926,0.242780636154981,0.302323556964751,0,0,0,0,0,0.712994756769443,0.316036757935816,1.05418608574999,0,0.680879211507576,1.08036656418786,0.129358683782755,2.14337035031592,0.532020700926821,0.891844088010353,1.81003922662333,1.2178597964584,0.23467170806371,0,0.220528398054962,0.49465875882444,0.161464426695906,0.241251699712623,0,0,0,23.9198639593557,0.170870880797853,0,0,0,0,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0.316335993581135,0.203319467126849,0.432021363287205,1.46361807210128,0.436725127492355,0.269728692769641,0.578574190077352,0,0.259229946583586,0,0,0.897099276263873,0.66183396182839,1.55560950675238,1.16243841129958,2.02747350588934,0.938857909166032,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,1.13365191807606,0.221985953374065,0,0,0.772758376128762,0.187682475451182,0.73260649706906,0.214368379079066,0,23.1548255472997,15.1907328047368,18.3326564300607,14.7793736815571,11.6464028361009,17.3740596399631,11.4753825039407,8.55610286126019,13.5942722695261,6.73088405277366,0.31136204275253,0,0.682934423016537,0.729320151204882,0.838452650511929,0.735374033800057,1.55572709461131,1.44224540067226,1.28367683836726,1.76888048234658,2.02783439912192,1.32038438970253,0.749132059759059,1.60062881012173,1.78049953762401,1.90517476513229,1.27472758539341,1.15745532278223,1.23625770240992,1.32479028120958,0.342869252385415,1.06485483695602,1.66905332963125,2.47088908274958,0.941093804153306,1.60767754994185,0.548783918618318,2.10455769150274,0.814824683075171,1.68342681497322,0.830445126869219,0.886540341380071,1.63692417267876,1.70430525304563,0.964533054905707,0.249810577937946,1.16965804222704,0.644613162144895,1.53030665655075,1.76473135295612,0.927471342481686
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,2.39827672018491,0,2.3331587888914,0.55994568650145,1.43752564364972,0,0.725362142011344,0.336093799142464,0,0.286533439938757,0,1.21389876515759,2.64495489636016,0.633831403506179,0.338844532069132,0,0,0,0,0,0,2.28117147078651,2.16009501330705,1.89292465216244,8.56952953211411,7.50953039235486,1.95985278743926,1.62937300731002,1.83843757322004,8.8092704799511,12.7687338085188,19.6616362567992,2.2420668914133,2.92760459527711,3.64639359389732,7.81712397203867,9.00420176050688,8.40390362772456,8.83885756421003,12.5287079103211,4.47358669980721,0.908714319998209,2.19157524309678,0,0,0,0,0,0,0.983110940922263,0,0,0,3.38024207464033,0,0,0,0,0.253359865475099,0,0.22836775943812,0,4.30482203287992,1.21439728736295,1.82679286987285,1.61430848079241,2.86373017049983,1.52865319276416,2.26199864393416,0.494389935468748,0.433798070759735,0.884610551949874,0.647067399789637,0,0.969750506270444,0,10.2473278954042,9.42510180660548,0,0,0,0,9.43681028250383,16.0125210986519,4.39790232395025,16.5133104182663,7.67146371990992,8.3115217823824,9.89671704713322,0.81471491080253,0.373220911830279,1.0108910337347,2.94618598241064,2.60240885925407,1.60931473103431,4.14142898552303,2.86339153887859,2.9255694635071,3.71529788826064,2.15513966487376,6.98499100995342,0,0,0.703804496655795,0.219195732427575,0.278047249225598,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0.493679549740441,0.164167464079095,0,0,0,0.134206418760372,16.1923260394378,7.71784592844633,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.605050573870028,0.444756087689741,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0.199141273254367,0.569003702859245,1.14248512609729,2.25415471346161,2.03651327845314,2.32742984601151,1.1221731182451,3.03535378196435,3.54264355151045,2.66897837330337,2.22114895059241,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0.189491411770485,0.488894929326078,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,14.2890025089135,12.0728037189969,0.491804836130026,0,7.2566890465739,4.68526493155966,9.26320610251035,4.54040716109849,3.34198011123591,5.37845408498782,6.8817819284732,8.47541987942804,11.8586333383957,7.06906896127976,2.12910127812403,0.35613120733451,0.488660878060728,1.31976098378028,2.65490276679926,0.242780636154981,0.302323556964751,0,0,0,0,0,0.712994756769443,0.316036757935816,1.05418608574999,0,0.680879211507576,1.08036656418786,0.129358683782755,2.14337035031592,0.532020700926821,0.891844088010353,1.81003922662333,1.2178597964584,0.23467170806371,0,0.220528398054962,0.49465875882444,0.161464426695906,0.241251699712623,0,0,0,23.9198639593557,0.170870880797853,0,0,0,0,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0.316335993581135,0.203319467126849,0.432021363287205,1.46361807210128,0.436725127492355,0.269728692769641,0.578574190077352,0,0.259229946583586,0,0,0.897099276263873,0.66183396182839,1.55560950675238,1.16243841129958,2.02747350588934,0.938857909166032,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,1.13365191807606,0.221985953374065,0,0,0.772758376128762,0.187682475451182,0.73260649706906,0.214368379079066,0,23.1548255472997,15.1907328047368,18.3326564300607,14.7793736815571,11.6464028361009,17.3740596399631,11.4753825039407,8.55610286126019,13.5942722695261,6.73088405277366,0.31136204275253,0,0.682934423016537,0.729320151204882,0.838452650511929,0.735374033800057,1.55572709461131,1.44224540067226,1.28367683836726,1.76888048234658,2.02783439912192,1.32038438970253,0.749132059759059,1.60062881012173,1.78049953762401,1.90517476513229,1.27472758539341,1.15745532278223,1.23625770240992,1.32479028120958,0.342869252385415,1.06485483695602,1.66905332963125,2.47088908274958,0.941093804153306,1.60767754994185,0.548783918618318,2.10455769150274,0.814824683075171,1.68342681497322,0.830445126869219,0.886540341380071,1.63692417267876,1.70430525304563,0.964533054905707,0.249810577937946,1.16965804222704,0.644613162144895,1.53030665655075,1.76473135295612,0.927471342481686
|short_description=p2@Slc6a15
|short_description=p2@Slc6a15
}}
}}

Latest revision as of 13:38, 25 September 2015

Short description:p2@Slc6a15
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Slc6a15_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -60bp_to_NM_001252330, NM_175328_5end
EntrezGene:Slc6a15
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Slc6a15

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I29.43
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.44
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D516.51
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B29.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.93
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E816.19
hippocampus, neonate N00.CNhs11228.627-43G17.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D53.04
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.29
medulla oblongata, neonate N30.CNhs11200.1396-42A312.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.26
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C923.92
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure9.21e-3695
ectoderm9.21e-3695
presumptive ectoderm9.21e-3695
neurectoderm9.26e-3664
neural plate9.26e-3664
presumptive neural plate9.26e-3664
central nervous system1.67e-3573
nervous system2.92e-3575
ecto-epithelium6.51e-3073
regional part of nervous system2.07e-2954
neural tube1.36e-2752
neural rod1.36e-2752
future spinal cord1.36e-2752
neural keel1.36e-2752
structure with developmental contribution from neural crest1.39e-2692
pre-chordal neural plate1.77e-2449
gray matter1.49e-2334
brain3.17e-2347
future brain3.17e-2347
regional part of brain1.76e-2246
brain grey matter1.53e-1929
regional part of telencephalon1.53e-1929
telencephalon1.53e-1929
anterior neural tube2.78e-1940
regional part of forebrain1.86e-1839
forebrain1.86e-1839
future forebrain1.86e-1839
cerebral cortex5.50e-1421
cerebral hemisphere5.50e-1421
pallium5.50e-1421
regional part of cerebral cortex7.29e-1217
occipital lobe3.10e-1010
visual cortex3.10e-1010
neocortex3.10e-1010
posterior neural tube7.51e-0912
chordal neural plate7.51e-0912
autonomic nervous system1.15e-079
peripheral nervous system5.10e-0711
basal ganglion9.47e-078
nuclear complex of neuraxis9.47e-078
aggregate regional part of brain9.47e-078
collection of basal ganglia9.47e-078
cerebral subcortex9.47e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:102830326..102830381,%2B&oldid=4194115"