FFCP PHASE1:Hg19::chr10:104178506..104178574,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5662 | |EntrezGene=5662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9507 | |HGNC=9507 | ||
|TSSclassifier=strong | |||
|UniProt=A5PKW4 | |UniProt=A5PKW4 | ||
|association_with_transcript=326bp_to_ENST00000020673,NM_002779,uc001kvg.1_5end | |association_with_transcript=326bp_to_ENST00000020673,NM_002779,uc001kvg.1_5end | ||
|cluster_id=chr10:104178506..104178574,- | |||
|coexpression_cluster_id=C2972 | |||
|description=CAGE_peak_2_at_PSD_5end | |description=CAGE_peak_2_at_PSD_5end | ||
|id=chr10:104178506..104178574,- | |id=chr10:104178506..104178574,- | ||
|ontology_enrichment_celltype=CL:0000047!2.41e-11!8;CL:0000540!5.76e-09!6;CL:0000031!5.76e-09!6;CL:0000404!5.76e-09!6;CL:0002322!1.23e-07!5;CL:0002319!6.54e-07!25 | |ontology_enrichment_celltype=CL:0000047!2.41e-11!8;CL:0000540!5.76e-09!6;CL:0000031!5.76e-09!6;CL:0000404!5.76e-09!6;CL:0002322!1.23e-07!5;CL:0002319!6.54e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.65e-11;6!CL:0000404;3.65e-11;6!CL:0002322;2.05e-09;5!CL:0002321;4.74e-07;15!CL:0002319;8.54e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.47e-11,8;CL:0000540,3.99e-11,6;CL:0000031,3.99e-11,6;CL:0000404,3.99e-11,6;CL:0002322,2.07e-09,5;CL:0002319,8.31e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.25e-18;82!CL:0000031;3.65e-11;6!UBERON:0003056;3.40e-07;3!UBERON:0006215;8.26e-07;3 | |||
|ontology_enrichment_disease=DOID:171!8.92e-09!10;DOID:3095!9.27e-09!22;DOID:2994!9.27e-09!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;5.02e-51;32!UBERON:0002780;8.13e-51;41!UBERON:0001890;8.13e-51;41!UBERON:0002619;4.33e-49;22!UBERON:0003528;1.03e-48;34!UBERON:0002020;1.03e-48;34!UBERON:0001893;1.06e-48;34!UBERON:0002791;5.98e-48;32!UBERON:0001950;1.10e-44;20!UBERON:0000956;1.47e-42;25!UBERON:0000203;1.47e-42;25!UBERON:0000073;1.49e-42;53!UBERON:0002616;1.49e-42;53!UBERON:0000955;1.89e-32;68!UBERON:0001017;5.09e-32;75!UBERON:0001016;1.89e-29;83!UBERON:0001871;3.36e-16;6!UBERON:0002420;5.51e-16;9!UBERON:0007245;5.51e-16;9!UBERON:0010009;5.51e-16;9!UBERON:0010011;5.51e-16;9!UBERON:0000454;5.51e-16;9!UBERON:0001894;2.03e-15;7!UBERON:0000125;4.52e-15;9!UBERON:0002308;4.52e-15;9!UBERON:0000200;6.66e-14;6!UBERON:0000349;1.96e-12;5!UBERON:0001872;9.05e-12;5!UBERON:0009663;9.10e-12;7!UBERON:0002021;1.32e-11;5!UBERON:0007023;1.96e-11;114!UBERON:0011216;2.79e-11;132!UBERON:0004732;1.19e-10;13!UBERON:0000369;2.91e-10;4!UBERON:0002435;2.91e-10;4!UBERON:0000204;2.91e-10;4!UBERON:0003296;4.19e-10;4!UBERON:0010133;4.19e-10;4!UBERON:0002784;1.23e-09;4!UBERON:0004733;2.53e-09;12!UBERON:0002028;2.53e-09;12!UBERON:0005383;3.75e-08;3!UBERON:0005382;3.75e-08;3!UBERON:0002298;6.75e-08;6!UBERON:0010314;8.65e-08;132!UBERON:0001870;8.91e-08;3!UBERON:0002680;1.38e-07;9!UBERON:0001895;1.38e-07;9 | |||
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|short_description=p2@PSD | |short_description=p2@PSD | ||
}} | }} |
Latest revision as of 01:07, 16 September 2015
Short description: | p2@PSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PSD_5end |
Coexpression cluster: | C2972_brain_pineal_temporal_parietal_occipital_duodenum_putamen |
Association with transcript: | 326bp_to_ENST00000020673, NM_002779, uc001kvg.1_5end |
EntrezGene: | PSD |
HGNC: | 9507 |
UniProt: | A5PKW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.47e-11 | 8 |
neuron | 3.99e-11 | 6 |
neuroblast | 3.99e-11 | 6 |
electrically signaling cell | 3.99e-11 | 6 |
embryonic stem cell | 2.07e-09 | 5 |
neural cell | 8.31e-07 | 25 |