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FFCP PHASE1:Mm9::chr10:126515978..126516002,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=216439
|EntrezGene=216439
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q3UHD9
|UniProt=Q3UHD9
|association_with_transcript=15bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end
|association_with_transcript=15bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end
|cluster_id=chr10:126515978..126516002,+
|description=CAGE_peak_3_at_Agap2_5end
|description=CAGE_peak_3_at_Agap2_5end
|id=chr10:126515978..126516002,+
|id=chr10:126515978..126516002,+
|ontology_enrichment_celltype=CL:0000117!1.84e-13!23;CL:0000337!1.84e-13!23;CL:0000540!2.93e-07!33;CL:0000047!2.93e-07!33;CL:0000031!2.93e-07!33;CL:0000404!2.93e-07!33;CL:0002319!5.19e-07!43
|ontology_enrichment_celltype=CL:0000117!1.84e-13!23;CL:0000337!1.84e-13!23;CL:0000540!2.93e-07!33;CL:0000047!2.93e-07!33;CL:0000031!2.93e-07!33;CL:0000404!2.93e-07!33;CL:0002319!5.19e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,6.24e-19,23;CL:0000337,6.24e-19,23;CL:0000540,1.71e-11,33;CL:0000047,1.71e-11,33;CL:0000031,1.71e-11,33;CL:0000404,1.71e-11,33;CL:0002319,2.60e-10,43;CL:0000221,7.18e-10,44;CL:0000133,7.18e-10,44;CL:0000393,1.72e-08,39;CL:0000211,1.72e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.09e-26!52;UBERON:0005068!6.09e-26!52;UBERON:0006241!6.09e-26!52;UBERON:0007135!6.09e-26!52;UBERON:0000955!3.47e-25!50;UBERON:0006238!3.47e-25!50;UBERON:0001017!1.24e-24!73;UBERON:0005743!1.24e-24!73;UBERON:0002616!2.25e-24!49;UBERON:0000033!3.23e-24!63;UBERON:0002346!1.25e-23!71;UBERON:0003075!1.25e-23!71;UBERON:0007284!1.25e-23!71;UBERON:0000073!5.91e-23!75;UBERON:0001016!5.91e-23!75;UBERON:0004121!2.57e-21!102;UBERON:0000924!2.57e-21!102;UBERON:0006601!2.57e-21!102;UBERON:0003056!3.09e-20!49;UBERON:0003080!3.74e-20!40;UBERON:0002020!8.38e-20!34;UBERON:0002780!1.64e-19!39;UBERON:0001890!1.64e-19!39;UBERON:0006240!1.64e-19!39;UBERON:0002791!4.96e-17!29;UBERON:0003528!4.96e-17!29;UBERON:0001893!4.96e-17!29;UBERON:0007811!5.73e-13!86;UBERON:0000153!1.10e-12!94;UBERON:0000956!4.16e-12!21;UBERON:0001869!4.16e-12!21;UBERON:0000203!4.16e-12!21;UBERON:0002619!3.33e-10!17;UBERON:0002021!1.87e-08!10;UBERON:0000411!1.87e-08!10;UBERON:0001950!1.87e-08!10;UBERON:0000025!9.92e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-33,54;UBERON:0001017,4.32e-32,73;UBERON:0001049,1.67e-31,52;UBERON:0005068,1.67e-31,52;UBERON:0006241,1.67e-31,52;UBERON:0007135,1.67e-31,52;UBERON:0001016,1.15e-30,75;UBERON:0002346,2.56e-29,64;UBERON:0003075,2.56e-29,64;UBERON:0007284,2.56e-29,64;UBERON:0000955,1.32e-27,47;UBERON:0006238,1.32e-27,47;UBERON:0002020,7.71e-27,34;UBERON:0002616,1.69e-26,46;UBERON:0004121,1.65e-25,95;UBERON:0000924,1.65e-25,95;UBERON:0006601,1.65e-25,95;UBERON:0003056,1.15e-23,49;UBERON:0003080,1.43e-23,40;UBERON:0010371,2.35e-23,73;UBERON:0003528,8.51e-23,29;UBERON:0002791,8.51e-23,29;UBERON:0001893,8.51e-23,29;UBERON:0002780,1.14e-22,39;UBERON:0001890,1.14e-22,39;UBERON:0006240,1.14e-22,39;UBERON:0010314,1.35e-17,92;UBERON:0000956,1.17e-15,21;UBERON:0001869,1.17e-15,21;UBERON:0000203,1.17e-15,21;UBERON:0002619,6.95e-13,17;UBERON:0002021,1.27e-11,10;UBERON:0000411,1.27e-11,10;UBERON:0001950,1.27e-11,10;UBERON:0002420,2.61e-08,8;UBERON:0007245,2.61e-08,8;UBERON:0010009,2.61e-08,8;UBERON:0010011,2.61e-08,8;UBERON:0000454,2.61e-08,8;UBERON:0003076,3.19e-08,12;UBERON:0003057,3.19e-08,12;UBERON:0000025,3.66e-08,114
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.917733760808408,2.34717403304412,0.218025156380447,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0,0,12.5436205732951,11.6378015439847,13.3104594736298,1.0165335962074,0,0,0,0,4.49400165777607,3.07374644257244,3.11068836925433,4.99521971827255,2.73422449756797,12.8542942981712,9.718215801871,5.63457676388789,7.18841032636773,6.43453150627015,8.8092704799511,37.0293280447044,25.0378649207677,13.7161739239402,21.5910838901687,23.4411016750542,11.725685958058,15.1945904708554,24.2949213965128,11.490514833473,12.6710795911202,6.33758115806022,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,10.1922095882658,0,0,0,0,1.02765491747154,1.03575153458869,1.1875371125186,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0.587943535678524,0.251333182659351,0,1.44599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,22.2513405728776,13.4045892360611,0,0,0,0,17.6752954497691,74.5725982594361,15.2041766056566,95.9510247461366,56.7688315273334,29.9214784165767,43.3184172390913,0.712875546952214,0.497627882440372,0.252722758433675,2.52530227063769,0.130120442962704,0,0.540186389416048,1.05493372485001,1.36072998302656,1.40925092313335,2.15513966487376,2.32833033665114,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0,1.02891068203972,0.995171334092466,0,0,0,0,0,0,0,0.393528463494808,0.462801338662135,0.465067889500816,0.536546802799238,0.583826711835847,0.329119699826961,0.492502392237286,1.13496333364198,0.438599962275997,1.09775057645525,1.07365135008297,116.921211401655,11.936935035997,0,0.528901133327089,0,0.464473343720877,0,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.974820435595601,0,0,0,0.189667900953082,0.342745537829186,0,0,0.387904974335251,0.49095073923223,0.758838445491087,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0.234690248288502,0.502518772325447,0,0.780534591431195,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0.491764273019036,0,6.58257418949947,4.68846746368813,1.3114795630134,0.757412781613119,0,0,0.215423397732799,0,0,0,0,1.16902343164525,0,115.996995228272,1.70328102249922,1.6025904330053,0.488660878060728,5.77395430403874,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0,0,0,0,0.632073515871632,0,0,2.04263763452273,0.540183282093931,0.646793418913773,0.857348140126369,2.30542303734956,0.713475270408282,2.63278432963394,2.13125464380219,0,0,0.441056796109924,0.8244312647074,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,8.71498919449395,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.756037385752609,0.209088296014469,0,0.674321731924103,0.578574190077352,0,0.388844919875379,0.621339313086926,0,0.299033092087958,0.165458490457098,0.972255941720238,0.645799117388655,0.337912250981556,0.352071715937262,0.5208175393758,0.314578033277133,0.241584120826006,0.576060012515731,0,0.608175645870493,0.308132871494482,0,0,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0.221985953374065,0,0,0.772758376128762,1.12609485270709,3.84618410961257,0.643105137237198,0,100.525827985838,101.271552031579,101.975401392213,115.313485352614,83.5800674120184,92.9134493789332,101.253375034771,95.918416286759,104.675896475351,100.445500479853,0.415149390336707,1.19707462020309,0.853668028770671,1.70174701947806,1.88651846365184,1.47074806760011,2.44471400581777,2.26638562962784,2.88827288632634,2.52697211763797,2.5347929989024,1.69763707247469,1.49826411951812,1.34452820050225,1.43588672389033,3.33405583898152,1.97003354106254,1.54327376370964,2.06042950401653,2.64958056241915,1.02860775715625,1.77475806159337,0.715308569841963,0.581385666529314,1.78807822789128,1.18460451048347,0.914639864363863,0.789209134313529,1.7654534799962,1.12228454331548,1.54225523561426,0.985044823755635,3.27384834535751,0.77468420592983,2.3148793317737,4.99621155875892,3.27504251823572,1.71896843238639,0.765153328275374,1.32354851471709,0.695603506861264
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.917733760808408,2.34717403304412,0.218025156380447,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0,0,12.5436205732951,11.6378015439847,13.3104594736298,1.0165335962074,0,0,0,0,4.49400165777607,3.07374644257244,3.11068836925433,4.99521971827255,2.73422449756797,12.8542942981712,9.718215801871,5.63457676388789,7.18841032636773,6.43453150627015,8.8092704799511,37.0293280447044,25.0378649207677,13.7161739239402,21.5910838901687,23.4411016750542,11.725685958058,15.1945904708554,24.2949213965128,11.490514833473,12.6710795911202,6.33758115806022,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,10.1922095882658,0,0,0,0,1.02765491747154,1.03575153458869,1.1875371125186,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0.587943535678524,0.251333182659351,0,1.44599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,22.2513405728776,13.4045892360611,0,0,0,0,17.6752954497691,74.5725982594361,15.2041766056566,95.9510247461366,56.7688315273334,29.9214784165767,43.3184172390913,0.712875546952214,0.497627882440372,0.252722758433675,2.52530227063769,0.130120442962704,0,0.540186389416048,1.05493372485001,1.36072998302656,1.40925092313335,2.15513966487376,2.32833033665114,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0,1.02891068203972,0.995171334092466,0,0,0,0,0,0,0,0.393528463494808,0.462801338662135,0.465067889500816,0.536546802799238,0.583826711835847,0.329119699826961,0.492502392237286,1.13496333364198,0.438599962275997,1.09775057645525,1.07365135008297,116.921211401655,11.936935035997,0,0.528901133327089,0,0.464473343720877,0,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.974820435595601,0,0,0,0.189667900953082,0.342745537829186,0,0,0.387904974335251,0.49095073923223,0.758838445491087,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0.234690248288502,0.502518772325447,0,0.780534591431195,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0.491764273019036,0,6.58257418949947,4.68846746368813,1.3114795630134,0.757412781613119,0,0,0.215423397732799,0,0,0,0,1.16902343164525,0,115.996995228272,1.70328102249922,1.6025904330053,0.488660878060728,5.77395430403874,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0,0,0,0,0.632073515871632,0,0,2.04263763452273,0.540183282093931,0.646793418913773,0.857348140126369,2.30542303734956,0.713475270408282,2.63278432963394,2.13125464380219,0,0,0.441056796109924,0.8244312647074,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,8.71498919449395,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.756037385752609,0.209088296014469,0,0.674321731924103,0.578574190077352,0,0.388844919875379,0.621339313086926,0,0.299033092087958,0.165458490457098,0.972255941720238,0.645799117388655,0.337912250981556,0.352071715937262,0.5208175393758,0.314578033277133,0.241584120826006,0.576060012515731,0,0.608175645870493,0.308132871494482,0,0,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0.221985953374065,0,0,0.772758376128762,1.12609485270709,3.84618410961257,0.643105137237198,0,100.525827985838,101.271552031579,101.975401392213,115.313485352614,83.5800674120184,92.9134493789332,101.253375034771,95.918416286759,104.675896475351,100.445500479853,0.415149390336707,1.19707462020309,0.853668028770671,1.70174701947806,1.88651846365184,1.47074806760011,2.44471400581777,2.26638562962784,2.88827288632634,2.52697211763797,2.5347929989024,1.69763707247469,1.49826411951812,1.34452820050225,1.43588672389033,3.33405583898152,1.97003354106254,1.54327376370964,2.06042950401653,2.64958056241915,1.02860775715625,1.77475806159337,0.715308569841963,0.581385666529314,1.78807822789128,1.18460451048347,0.914639864363863,0.789209134313529,1.7654534799962,1.12228454331548,1.54225523561426,0.985044823755635,3.27384834535751,0.77468420592983,2.3148793317737,4.99621155875892,3.27504251823572,1.71896843238639,0.765153328275374,1.32354851471709,0.695603506861264
|short_description=p3@Agap2
|short_description=p3@Agap2
}}
}}

Latest revision as of 17:17, 25 September 2015

Short description:p3@Agap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Agap2_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 15bp_to_ENSMUST00000039259, ENSMUST00000105254, NM_001033263, uc007hhx.1, uc007hhy.1_5end
EntrezGene:Agap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Agap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.54
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F337.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.04
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.72
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D823.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B222.25
cerebellum, neonate N30.CNhs11135.1395-42I213.40
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.68
corpus striatum, adult.CNhs10487.19-21D874.57
corpus striatum, neonate N00.CNhs11226.630-43F115.20
cortex, adult.CNhs10473.12-14D595.95
cortex, neonate N30.CNhs11107.1392-42F256.77
diencephalon, adult.CNhs10482.20-12F229.92
diencephalon, neonate N30.CNhs11201.1388-42B243.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E8116.92
hippocampus, neonate N00.CNhs11228.627-43G111.94
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.58
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9116.00
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C98.71
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1100.53
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2101.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3101.98
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7115.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A483.58
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A592.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6101.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A795.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8104.68
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9100.45
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.24e-1923
neuroblast (sensu Vertebrata)6.24e-1923
neuron1.71e-1133
neuronal stem cell1.71e-1133
neuroblast1.71e-1133
electrically signaling cell1.71e-1133
neural cell2.60e-1043
ectodermal cell7.18e-1044
neurectodermal cell7.18e-1044
electrically responsive cell1.72e-0839
electrically active cell1.72e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.50e-3354
central nervous system4.32e-3273
neural tube1.67e-3152
neural rod1.67e-3152
future spinal cord1.67e-3152
neural keel1.67e-3152
nervous system1.15e-3075
neurectoderm2.56e-2964
neural plate2.56e-2964
presumptive neural plate2.56e-2964
brain1.32e-2747
future brain1.32e-2747
gray matter7.71e-2734
regional part of brain1.69e-2646
ectoderm-derived structure1.65e-2595
ectoderm1.65e-2595
presumptive ectoderm1.65e-2595
pre-chordal neural plate1.15e-2349
anterior neural tube1.43e-2340
ecto-epithelium2.35e-2373
brain grey matter8.51e-2329
regional part of telencephalon8.51e-2329
telencephalon8.51e-2329
regional part of forebrain1.14e-2239
forebrain1.14e-2239
future forebrain1.14e-2239
structure with developmental contribution from neural crest1.35e-1792
cerebral cortex1.17e-1521
cerebral hemisphere1.17e-1521
pallium1.17e-1521
regional part of cerebral cortex6.95e-1317
occipital lobe1.27e-1110
visual cortex1.27e-1110
neocortex1.27e-1110
basal ganglion2.61e-088
nuclear complex of neuraxis2.61e-088
aggregate regional part of brain2.61e-088
collection of basal ganglia2.61e-088
cerebral subcortex2.61e-088
posterior neural tube3.19e-0812
chordal neural plate3.19e-0812
tube3.66e-08114
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