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FFCP PHASE1:Mm9::chr16:41533415..41533438,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268890
|EntrezGene=268890
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BLK3
|UniProt=Q8BLK3
|association_with_transcript=-16bp_to_NM_175548,uc007zfs.1,uc007zft.1_5end
|association_with_transcript=-16bp_to_NM_175548,uc007zfs.1,uc007zft.1_5end
|cluster_id=chr16:41533415..41533438,+
|description=CAGE_peak_4_at_Lsamp_5end
|description=CAGE_peak_4_at_Lsamp_5end
|id=chr16:41533415..41533438,+
|id=chr16:41533415..41533438,+
|ontology_enrichment_celltype=CL:0000117!8.68e-08!23;CL:0000337!8.68e-08!23;CL:0000221!2.12e-07!44;CL:0000133!2.12e-07!44;CL:0002319!5.50e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,3.15e-09,23;CL:0000337,3.15e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!6.42e-27!102;UBERON:0000924!6.42e-27!102;UBERON:0006601!6.42e-27!102;UBERON:0000033!1.07e-23!63;UBERON:0001017!1.05e-22!73;UBERON:0005743!1.05e-22!73;UBERON:0000073!8.15e-22!75;UBERON:0001016!8.15e-22!75;UBERON:0002346!1.48e-21!71;UBERON:0003075!1.48e-21!71;UBERON:0007284!1.48e-21!71;UBERON:0001049!5.26e-19!52;UBERON:0005068!5.26e-19!52;UBERON:0006241!5.26e-19!52;UBERON:0007135!5.26e-19!52;UBERON:0000955!5.39e-18!50;UBERON:0006238!5.39e-18!50;UBERON:0002616!1.97e-17!49;UBERON:0003056!1.46e-16!49;UBERON:0002020!7.87e-13!34;UBERON:0000153!8.99e-13!94;UBERON:0003080!9.72e-13!40;UBERON:0002780!4.49e-12!39;UBERON:0001890!4.49e-12!39;UBERON:0006240!4.49e-12!39;UBERON:0007811!1.12e-11!86;UBERON:0002791!3.38e-10!29;UBERON:0003528!3.38e-10!29;UBERON:0001893!3.38e-10!29;UBERON:0000468!7.63e-08!333;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10;UBERON:0003076!2.69e-07!12;UBERON:0003057!2.69e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.05e-26,95;UBERON:0000924,4.05e-26,95;UBERON:0006601,4.05e-26,95;UBERON:0010371,9.47e-24,73;UBERON:0002346,2.90e-23,64;UBERON:0003075,2.90e-23,64;UBERON:0007284,2.90e-23,64;UBERON:0001017,1.12e-21,73;UBERON:0000073,3.05e-21,54;UBERON:0001016,1.27e-20,75;UBERON:0001049,1.73e-19,52;UBERON:0005068,1.73e-19,52;UBERON:0006241,1.73e-19,52;UBERON:0007135,1.73e-19,52;UBERON:0003056,1.02e-17,49;UBERON:0010314,6.96e-17,92;UBERON:0000955,1.55e-15,47;UBERON:0006238,1.55e-15,47;UBERON:0002020,1.78e-15,34;UBERON:0002616,8.10e-15,46;UBERON:0003080,1.76e-12,40;UBERON:0003528,9.65e-12,29;UBERON:0002791,9.65e-12,29;UBERON:0001893,9.65e-12,29;UBERON:0002780,1.27e-11,39;UBERON:0001890,1.27e-11,39;UBERON:0006240,1.27e-11,39;UBERON:0002021,9.55e-11,10;UBERON:0000411,9.55e-11,10;UBERON:0001950,9.55e-11,10;UBERON:0000020,1.38e-08,12;UBERON:0001032,1.38e-08,12;UBERON:0004456,1.38e-08,12;UBERON:0003076,3.29e-08,12;UBERON:0003057,3.29e-08,12;UBERON:0000033,1.16e-07,13;UBERON:0002619,1.92e-07,17;UBERON:0002420,2.26e-07,8;UBERON:0007245,2.26e-07,8;UBERON:0010009,2.26e-07,8;UBERON:0010011,2.26e-07,8;UBERON:0000454,2.26e-07,8
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.219686182734472,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0,0,0,2.22548106945558,2.64495489636016,3.1691570175309,0,0,0,0,0,2.99600110518405,2.68952813725088,0.414758449233911,0.540023753326763,0.210324961351382,10.2834354385369,6.62605622854841,0.734944795289724,0.191690942036473,0,17.6185409599022,10.5980490610706,12.4421291937557,2.63772575460388,2.56165402086747,1.56274011167028,12.5632349550621,10.6924895906019,15.4326230254578,10.0173719061047,9.96601765593721,2.60959224155421,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,5.21120653173718,0,0,0,0,0,0,0.45673551887624,0.517875767294343,1.7813056687779,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.502666365318702,0,1.01219549843938,0,0.485300549842228,0.220841518460394,0,0,28.3997373101201,24.2958179903608,0,0,0,0,18.574039286198,10.5225138648284,2.1361239859187,12.8629996942285,11.5071955798649,12.8828587626927,10.707923362472,0.305518091550949,0.497627882440372,0,2.31486041475121,1.17108398666433,2.29902104433473,1.62055916824814,1.65775299619287,2.85753296435577,2.3060469651273,3.18585863503078,6.46758426847539,0,0.567318240503458,1.05570674498369,1.09597866213787,1.11218899690239,2.43776516565517,3.08673204611915,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0.233530684734339,0,0.820837320395476,0.810688095458557,1.02339991197733,1.75640092232841,1.20785776884335,10.5144974282064,3.60166143327496,0,0,0.426576501070468,0.696710015581316,0.644337306610467,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0.597423819763102,0.569003702859245,1.02823661348756,3.38123207019241,0.407302655690628,1.16371492300575,0.561086559122548,0.189709611372772,0,0.470996183524124,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0.482443521363367,0.554259570499814,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.44292937929755,0.637819074629948,0.81931657357869,1.03610989119537,0.433947175744535,0,0,0,0.551873492609465,13.9679013289379,14.417037450841,0,1.00988370881749,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,6.10510501201433,1.84522110770749,0.712262414669021,0.488660878060728,3.46437258242324,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,1.03135543248187,1.36175842301515,0.36012218806262,1.16422815404479,0.428674070063185,0.709360934569094,0.891844088010353,1.81003922662333,0.913394847343798,0.23467170806371,0,0.220528398054962,0.8244312647074,1.13025098687134,1.80938774784468,0.716234064018819,1.14898629821543,0.291480836629851,15.9465759729038,0,0.82554747185289,0.740778109478847,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.432021363287205,0.418176592028937,0.218362563746178,0.674321731924103,0.991841468704031,1.83229159388821,0.388844919875379,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0.5208175393758,0.838874755405687,0.483168241652012,0,0.316011120628178,0,0.410843828659309,0.51968329191118,0,0,0.240390899039938,0,0.100966449948148,0,0.302478555410522,0.292373642219257,0,0.116876902181569,2.0405734525369,0,0.0897138566094757,0,0.965947970160952,0.187682475451182,2.01466786693992,0.643105137237198,0.501572104035363,8.471277639256,15.651058041244,14.8952833494243,11.1704568523397,13.0165678756422,8.3093328712867,14.8504950050997,13.9599572999508,10.8754178156209,10.3552062350364,0.207574695168353,0.399024873401031,1.53660245178721,0.972426868273176,0.838452650511929,0.367687016900028,1.55572709461131,1.44224540067226,2.24643446714271,1.76888048234658,0.25347929989024,0.943131706930381,1.21733959710847,1.47257850531199,0.861532034334199,0,0.811190281613988,1.54327376370964,1.23625770240992,1.17759136107518,1.37147700954166,1.06485483695602,1.90748951957857,0.726732083161643,0.658765662907314,1.94613598150856,0.914639864363863,2.10455769150274,1.22223702461276,1.12228454331548,1.18635018124174,1.18205378850676,1.63692417267876,0.929621047115796,1.15743966588685,1.99848462350357,1.16965804222704,1.28922632428979,1.14772999241306,1.10295709559758,0.927471342481686
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.219686182734472,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0,0,0,2.22548106945558,2.64495489636016,3.1691570175309,0,0,0,0,0,2.99600110518405,2.68952813725088,0.414758449233911,0.540023753326763,0.210324961351382,10.2834354385369,6.62605622854841,0.734944795289724,0.191690942036473,0,17.6185409599022,10.5980490610706,12.4421291937557,2.63772575460388,2.56165402086747,1.56274011167028,12.5632349550621,10.6924895906019,15.4326230254578,10.0173719061047,9.96601765593721,2.60959224155421,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,5.21120653173718,0,0,0,0,0,0,0.45673551887624,0.517875767294343,1.7813056687779,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.502666365318702,0,1.01219549843938,0,0.485300549842228,0.220841518460394,0,0,28.3997373101201,24.2958179903608,0,0,0,0,18.574039286198,10.5225138648284,2.1361239859187,12.8629996942285,11.5071955798649,12.8828587626927,10.707923362472,0.305518091550949,0.497627882440372,0,2.31486041475121,1.17108398666433,2.29902104433473,1.62055916824814,1.65775299619287,2.85753296435577,2.3060469651273,3.18585863503078,6.46758426847539,0,0.567318240503458,1.05570674498369,1.09597866213787,1.11218899690239,2.43776516565517,3.08673204611915,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0.233530684734339,0,0.820837320395476,0.810688095458557,1.02339991197733,1.75640092232841,1.20785776884335,10.5144974282064,3.60166143327496,0,0,0.426576501070468,0.696710015581316,0.644337306610467,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0.597423819763102,0.569003702859245,1.02823661348756,3.38123207019241,0.407302655690628,1.16371492300575,0.561086559122548,0.189709611372772,0,0.470996183524124,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0.482443521363367,0.554259570499814,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.44292937929755,0.637819074629948,0.81931657357869,1.03610989119537,0.433947175744535,0,0,0,0.551873492609465,13.9679013289379,14.417037450841,0,1.00988370881749,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,6.10510501201433,1.84522110770749,0.712262414669021,0.488660878060728,3.46437258242324,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,1.03135543248187,1.36175842301515,0.36012218806262,1.16422815404479,0.428674070063185,0.709360934569094,0.891844088010353,1.81003922662333,0.913394847343798,0.23467170806371,0,0.220528398054962,0.8244312647074,1.13025098687134,1.80938774784468,0.716234064018819,1.14898629821543,0.291480836629851,15.9465759729038,0,0.82554747185289,0.740778109478847,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.432021363287205,0.418176592028937,0.218362563746178,0.674321731924103,0.991841468704031,1.83229159388821,0.388844919875379,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0.5208175393758,0.838874755405687,0.483168241652012,0,0.316011120628178,0,0.410843828659309,0.51968329191118,0,0,0.240390899039938,0,0.100966449948148,0,0.302478555410522,0.292373642219257,0,0.116876902181569,2.0405734525369,0,0.0897138566094757,0,0.965947970160952,0.187682475451182,2.01466786693992,0.643105137237198,0.501572104035363,8.471277639256,15.651058041244,14.8952833494243,11.1704568523397,13.0165678756422,8.3093328712867,14.8504950050997,13.9599572999508,10.8754178156209,10.3552062350364,0.207574695168353,0.399024873401031,1.53660245178721,0.972426868273176,0.838452650511929,0.367687016900028,1.55572709461131,1.44224540067226,2.24643446714271,1.76888048234658,0.25347929989024,0.943131706930381,1.21733959710847,1.47257850531199,0.861532034334199,0,0.811190281613988,1.54327376370964,1.23625770240992,1.17759136107518,1.37147700954166,1.06485483695602,1.90748951957857,0.726732083161643,0.658765662907314,1.94613598150856,0.914639864363863,2.10455769150274,1.22223702461276,1.12228454331548,1.18635018124174,1.18205378850676,1.63692417267876,0.929621047115796,1.15743966588685,1.99848462350357,1.16965804222704,1.28922632428979,1.14772999241306,1.10295709559758,0.927471342481686
|short_description=p4@Lsamp
|short_description=p4@Lsamp
}}
}}

Latest revision as of 00:27, 2 October 2015

Short description:p4@Lsamp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Lsamp_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -16bp_to_NM_175548, uc007zfs.1, uc007zft.1_5end
EntrezGene:Lsamp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Lsamp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B228.40
cerebellum, neonate N30.CNhs11135.1395-42I224.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.57
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D512.86
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C213.97
medulla oblongata, neonate N30.CNhs11200.1396-42A314.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.15e-0923
neuroblast (sensu Vertebrata)3.15e-0923

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure4.05e-2695
ectoderm4.05e-2695
presumptive ectoderm4.05e-2695
ecto-epithelium9.47e-2473
neurectoderm2.90e-2364
neural plate2.90e-2364
presumptive neural plate2.90e-2364
central nervous system1.12e-2173
regional part of nervous system3.05e-2154
nervous system1.27e-2075
neural tube1.73e-1952
neural rod1.73e-1952
future spinal cord1.73e-1952
neural keel1.73e-1952
pre-chordal neural plate1.02e-1749
structure with developmental contribution from neural crest6.96e-1792
brain1.55e-1547
future brain1.55e-1547
gray matter1.78e-1534
regional part of brain8.10e-1546
anterior neural tube1.76e-1240
brain grey matter9.65e-1229
regional part of telencephalon9.65e-1229
telencephalon9.65e-1229
regional part of forebrain1.27e-1139
forebrain1.27e-1139
future forebrain1.27e-1139
occipital lobe9.55e-1110
visual cortex9.55e-1110
neocortex9.55e-1110
sense organ1.38e-0812
sensory system1.38e-0812
entire sense organ system1.38e-0812
posterior neural tube3.29e-0812
chordal neural plate3.29e-0812
head1.16e-0713
regional part of cerebral cortex1.92e-0717
basal ganglion2.26e-078
nuclear complex of neuraxis2.26e-078
aggregate regional part of brain2.26e-078
collection of basal ganglia2.26e-078
cerebral subcortex2.26e-078
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