FFCP PHASE1:Hg19::chr12:120806986..120807021,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4440 | |EntrezGene=4440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7330 | |HGNC=7330 | ||
|TSSclassifier=strong | |||
|UniProt=O43347 | |UniProt=O43347 | ||
|association_with_transcript=-3bp_to_ENST00000257552_5end | |association_with_transcript=-3bp_to_ENST00000257552_5end | ||
|cluster_id=chr12:120806986..120807021,- | |||
|coexpression_cluster_id=C3245 | |||
|description=CAGE_peak_1_at_MSI1_5end | |description=CAGE_peak_1_at_MSI1_5end | ||
|id=chr12:120806986..120807021,- | |id=chr12:120806986..120807021,- | ||
|ontology_enrichment_celltype=CL:0002319!6.15e-12!25;CL:0000133!3.49e-10!59;CL:0000047!7.88e-08!8;CL:0000128!4.97e-07!7;CL:0000126!4.97e-07!7;CL:0000127!4.97e-07!7;CL:0002453!4.97e-07!7 | |ontology_enrichment_celltype=CL:0002319!6.15e-12!25;CL:0000133!3.49e-10!59;CL:0000047!7.88e-08!8;CL:0000128!4.97e-07!7;CL:0000126!4.97e-07!7;CL:0000127!4.97e-07!7;CL:0002453!4.97e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.60e-15;25!CL:0000128;3.41e-09;7!CL:0000126;3.41e-09;7!CL:0000127;3.41e-09;7!CL:0000243;4.31e-08;15!CL:0000125;4.31e-08;15!CL:0000095;6.31e-08;17!CL:0000540;6.99e-08;6!CL:0000404;6.99e-08;6!CL:0002322;1.72e-07;5!CL:0000039;4.20e-07;7!CL:0000586;4.20e-07;7!CL:0002321;8.00e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.88e-15,25;CL:0000133,8.15e-13,59;CL:0000047,2.47e-10,8;CL:0000128,3.22e-09,7;CL:0000126,3.22e-09,7;CL:0000127,3.22e-09,7;CL:0002453,3.22e-09,7;CL:0000221,9.68e-09,72;CL:0000243,5.19e-08,15;CL:0000125,5.19e-08,15;CL:0000030,5.19e-08,15;CL:0000339,5.19e-08,15;CL:0000095,6.94e-08,17;CL:0000123,6.94e-08,17;CL:0000540,7.38e-08,6;CL:0000031,7.38e-08,6;CL:0000404,7.38e-08,6;CL:0000333,1.02e-07,41;CL:0002322,1.77e-07,5;CL:0000039,3.65e-07,7;CL:0000586,3.65e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.34e-10;82!CL:0000339;4.31e-08;15!CL:0000031;6.99e-08;6!UBERON:0006238;8.05e-07;10!CL:0000133;8.58e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!1.18e-10!22;DOID:2994!1.18e-10!22;DOID:0050687!4.87e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.29e-09;22!DOID:2994;2.29e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.50e-09,22;DOID:2994,1.50e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.48e-44!94;UBERON:0001016!2.48e-44!94;UBERON:0005743!4.30e-43!86;UBERON:0001017!5.51e-40!82;UBERON:0002346!3.46e-38!90;UBERON:0003075!2.64e-37!86;UBERON:0007284!2.64e-37!86;UBERON:0000955!3.62e-31!69;UBERON:0006238!3.62e-31!69;UBERON:0000924!9.26e-31!173;UBERON:0006601!9.26e-31!173;UBERON:0004121!1.07e-29!169;UBERON:0001049!1.17e-29!57;UBERON:0005068!1.17e-29!57;UBERON:0006241!1.17e-29!57;UBERON:0007135!1.17e-29!57;UBERON:0003056!9.13e-29!61;UBERON:0000033!6.70e-27!123;UBERON:0002616!6.77e-26!59;UBERON:0000153!7.26e-25!129;UBERON:0007811!7.26e-25!129;UBERON:0002780!6.76e-24!41;UBERON:0001890!6.76e-24!41;UBERON:0006240!6.76e-24!41;UBERON:0003080!6.63e-23!42;UBERON:0001893!6.85e-20!34;UBERON:0002020!1.07e-19!34;UBERON:0003528!1.07e-19!34;UBERON:0002791!1.95e-19!33;UBERON:0007023!4.72e-19!115;UBERON:0001869!8.58e-19!32;UBERON:0000956!1.27e-15!25;UBERON:0000203!1.27e-15!25;UBERON:0000922!1.60e-13!612;UBERON:0000481!2.50e-13!347;UBERON:0002619!4.38e-13!22;UBERON:0000064!9.98e-13!219;UBERON:0000475!3.44e-12!365;UBERON:0000119!8.10e-12!312;UBERON:0001950!8.33e-12!20;UBERON:0000483!8.99e-12!309;UBERON:0002050!1.34e-10!605;UBERON:0005423!1.34e-10!605;UBERON:0000923!2.25e-10!604;UBERON:0005291!2.25e-10!604;UBERON:0006598!2.25e-10!604;UBERON:0002532!2.25e-10!604;UBERON:0000062!4.55e-10!511;UBERON:0000468!5.14e-10!659;UBERON:0000025!1.41e-09!194;UBERON:0001032!1.68e-08!24;UBERON:0004456!1.68e-08!24;UBERON:0000467!2.24e-08!625;UBERON:0002104!2.77e-08!21;UBERON:0000480!2.95e-08!626;UBERON:0000020!3.77e-08!23;UBERON:0000970!6.22e-08!20;UBERON:0003076!6.79e-08!15;UBERON:0003057!6.79e-08!15;UBERON:0001456!1.30e-07!21;UBERON:0007625!1.68e-07!11;UBERON:0004111!1.90e-07!241;UBERON:0000019!3.24e-07!19;UBERON:0000047!3.24e-07!19;UBERON:0004088!3.24e-07!19;UBERON:0003072!3.24e-07!19;UBERON:0003071!3.24e-07!19;UBERON:0004128!3.24e-07!19;UBERON:0000477!7.55e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.32e-20;41!UBERON:0001890;2.32e-20;41!UBERON:0000073;6.65e-20;53!UBERON:0002616;6.65e-20;53!UBERON:0001893;3.66e-19;34!UBERON:0002791;5.96e-19;32!UBERON:0001869;1.28e-18;32!UBERON:0003528;2.15e-18;34!UBERON:0002020;2.15e-18;34!UBERON:0000956;2.86e-17;25!UBERON:0000203;2.86e-17;25!UBERON:0001017;3.87e-17;75!UBERON:0001016;4.12e-16;83!UBERON:0000955;6.32e-16;68!UBERON:0002619;6.67e-14;22!UBERON:0001950;3.66e-12;20!UBERON:0000922;4.45e-12;49!UBERON:0004732;1.08e-08;13!UBERON:0004733;3.33e-08;12!UBERON:0002028;3.33e-08;12!UBERON:0002104;8.93e-08;21!UBERON:0001032;1.45e-07;24!UBERON:0004456;1.45e-07;24!UBERON:0007625;2.19e-07;11!UBERON:0000970;2.64e-07;20!UBERON:0000020;4.15e-07;23!UBERON:0001894;4.58e-07;7!UBERON:0000966;8.60e-07;5!UBERON:0005388;8.60e-07;5!UBERON:0001802;8.60e-07;5!UBERON:0011216;9.11e-07;132 | |||
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| ||
|short_description=p1@MSI1 | |short_description=p1@MSI1 | ||
}} | }} |
Latest revision as of 20:13, 16 September 2015
Short description: | p1@MSI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MSI1_5end |
Coexpression cluster: | C3245_Astrocyte_Lens_Neural_eye_medulloblastoma_neuroblastoma_small |
Association with transcript: | -3bp_to_ENST00000257552_5end |
EntrezGene: | MSI1 |
HGNC: | 7330 |
UniProt: | O43347 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.88e-15 | 25 |
neurectodermal cell | 8.15e-13 | 59 |
neuronal stem cell | 2.47e-10 | 8 |
oligodendrocyte | 3.22e-09 | 7 |
macroglial cell | 3.22e-09 | 7 |
astrocyte | 3.22e-09 | 7 |
oligodendrocyte precursor cell | 3.22e-09 | 7 |
ectodermal cell | 9.68e-09 | 72 |
glial cell (sensu Vertebrata) | 5.19e-08 | 15 |
glial cell | 5.19e-08 | 15 |
glioblast | 5.19e-08 | 15 |
glioblast (sensu Vertebrata) | 5.19e-08 | 15 |
neuron associated cell | 6.94e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 6.94e-08 | 17 |
neuron | 7.38e-08 | 6 |
neuroblast | 7.38e-08 | 6 |
electrically signaling cell | 7.38e-08 | 6 |
migratory neural crest cell | 1.02e-07 | 41 |
embryonic stem cell | 1.77e-07 | 5 |
germ line cell | 3.65e-07 | 7 |
germ cell | 3.65e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.50e-09 | 22 |
germ cell cancer | 1.50e-09 | 22 |