FFCP PHASE1:Mm9::chr10:32609807..32609833,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=432450 | |EntrezGene=432450 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q4PNJ2 | |UniProt=Q4PNJ2 | ||
|association_with_transcript=-86bp_to_NM_001013411,NM_001025286,uc007etw.2,uc007ety.2_5end | |association_with_transcript=-86bp_to_NM_001013411,NM_001025286,uc007etw.2,uc007ety.2_5end | ||
|cluster_id=chr10:32609807..32609833,- | |||
|description=CAGE_peak_3_at_Nkain2_5end | |description=CAGE_peak_3_at_Nkain2_5end | ||
|id=chr10:32609807..32609833,- | |id=chr10:32609807..32609833,- | ||
|ontology_enrichment_celltype=CL:0000393!1.19e-17!39;CL:0000211!1.19e-17!39;CL:0000540!1.28e-17!33;CL:0000047!1.28e-17!33;CL:0000031!1.28e-17!33;CL:0000404!1.28e-17!33;CL:0000221!1.62e-16!44;CL:0000133!1.62e-16!44;CL:0002319!7.81e-16!43;CL:0000055!1.30e-15!50;CL:0000117!1.10e-13!23;CL:0000337!1.10e-13!23;CL:0002321!1.12e-07!70;CL:0000220!1.12e-07!70 | |ontology_enrichment_celltype=CL:0000393!1.19e-17!39;CL:0000211!1.19e-17!39;CL:0000540!1.28e-17!33;CL:0000047!1.28e-17!33;CL:0000031!1.28e-17!33;CL:0000404!1.28e-17!33;CL:0000221!1.62e-16!44;CL:0000133!1.62e-16!44;CL:0002319!7.81e-16!43;CL:0000055!1.30e-15!50;CL:0000117!1.10e-13!23;CL:0000337!1.10e-13!23;CL:0002321!1.12e-07!70;CL:0000220!1.12e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.43e-10,23;CL:0000337,4.43e-10,23;CL:0000540,8.08e-09,33;CL:0000047,8.08e-09,33;CL:0000031,8.08e-09,33;CL:0000404,8.08e-09,33;CL:0000393,3.90e-08,39;CL:0000211,3.90e-08,39;CL:0002610,5.52e-07,3;CL:0000221,6.29e-07,44;CL:0000133,6.29e-07,44;CL:0002614,9.31e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.91e-33!75;UBERON:0001016!1.91e-33!75;UBERON:0001017!3.74e-32!73;UBERON:0005743!3.74e-32!73;UBERON:0004121!6.71e-28!102;UBERON:0000924!6.71e-28!102;UBERON:0006601!6.71e-28!102;UBERON:0001049!1.78e-25!52;UBERON:0005068!1.78e-25!52;UBERON:0006241!1.78e-25!52;UBERON:0007135!1.78e-25!52;UBERON:0000955!1.14e-24!50;UBERON:0006238!1.14e-24!50;UBERON:0002616!7.38e-24!49;UBERON:0002346!1.29e-23!71;UBERON:0003075!1.29e-23!71;UBERON:0007284!1.29e-23!71;UBERON:0000033!5.17e-23!63;UBERON:0002020!1.15e-22!34;UBERON:0002791!8.45e-20!29;UBERON:0003528!8.45e-20!29;UBERON:0001893!8.45e-20!29;UBERON:0003080!4.52e-19!40;UBERON:0002780!2.58e-18!39;UBERON:0001890!2.58e-18!39;UBERON:0006240!2.58e-18!39;UBERON:0003056!1.34e-17!49;UBERON:0000956!2.60e-14!21;UBERON:0001869!2.60e-14!21;UBERON:0000203!2.60e-14!21;UBERON:0002619!1.90e-12!17;UBERON:0007811!1.05e-11!86;UBERON:0002021!1.21e-09!10;UBERON:0000411!1.21e-09!10;UBERON:0001950!1.21e-09!10;UBERON:0000153!4.16e-09!94;UBERON:0004111!1.03e-07!122;UBERON:0000025!5.48e-07!114;UBERON:0003076!5.90e-07!12;UBERON:0003057!5.90e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!1.91e-33!75;UBERON:0001016!1.91e-33!75;UBERON:0001017!3.74e-32!73;UBERON:0005743!3.74e-32!73;UBERON:0004121!6.71e-28!102;UBERON:0000924!6.71e-28!102;UBERON:0006601!6.71e-28!102;UBERON:0001049!1.78e-25!52;UBERON:0005068!1.78e-25!52;UBERON:0006241!1.78e-25!52;UBERON:0007135!1.78e-25!52;UBERON:0000955!1.14e-24!50;UBERON:0006238!1.14e-24!50;UBERON:0002616!7.38e-24!49;UBERON:0002346!1.29e-23!71;UBERON:0003075!1.29e-23!71;UBERON:0007284!1.29e-23!71;UBERON:0000033!5.17e-23!63;UBERON:0002020!1.15e-22!34;UBERON:0002791!8.45e-20!29;UBERON:0003528!8.45e-20!29;UBERON:0001893!8.45e-20!29;UBERON:0003080!4.52e-19!40;UBERON:0002780!2.58e-18!39;UBERON:0001890!2.58e-18!39;UBERON:0006240!2.58e-18!39;UBERON:0003056!1.34e-17!49;UBERON:0000956!2.60e-14!21;UBERON:0001869!2.60e-14!21;UBERON:0000203!2.60e-14!21;UBERON:0002619!1.90e-12!17;UBERON:0007811!1.05e-11!86;UBERON:0002021!1.21e-09!10;UBERON:0000411!1.21e-09!10;UBERON:0001950!1.21e-09!10;UBERON:0000153!4.16e-09!94;UBERON:0004111!1.03e-07!122;UBERON:0000025!5.48e-07!114;UBERON:0003076!5.90e-07!12;UBERON:0003057!5.90e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.89e-34,73;UBERON:0000073,9.88e-33,54;UBERON:0001016,1.04e-32,75;UBERON:0001049,1.11e-29,52;UBERON:0005068,1.11e-29,52;UBERON:0006241,1.11e-29,52;UBERON:0007135,1.11e-29,52;UBERON:0000955,1.04e-28,47;UBERON:0006238,1.04e-28,47;UBERON:0002616,4.73e-27,46;UBERON:0004121,1.01e-25,95;UBERON:0000924,1.01e-25,95;UBERON:0006601,1.01e-25,95;UBERON:0002346,1.59e-24,64;UBERON:0003075,1.59e-24,64;UBERON:0007284,1.59e-24,64;UBERON:0002020,4.25e-24,34;UBERON:0003528,8.20e-24,29;UBERON:0002791,8.20e-24,29;UBERON:0001893,8.20e-24,29;UBERON:0002021,2.23e-22,10;UBERON:0000411,2.23e-22,10;UBERON:0001950,2.23e-22,10;UBERON:0003080,2.38e-22,40;UBERON:0010371,2.89e-22,73;UBERON:0002780,8.28e-21,39;UBERON:0001890,8.28e-21,39;UBERON:0006240,8.28e-21,39;UBERON:0003056,3.31e-17,49;UBERON:0010314,3.97e-16,92;UBERON:0002619,7.42e-15,17;UBERON:0000956,5.57e-14,21;UBERON:0001869,5.57e-14,21;UBERON:0000203,5.57e-14,21;UBERON:0002420,1.32e-11,8;UBERON:0007245,1.32e-11,8;UBERON:0010009,1.32e-11,8;UBERON:0010011,1.32e-11,8;UBERON:0000454,1.32e-11,8;UBERON:0000025,1.41e-10,114;UBERON:0004111,2.48e-10,122;UBERON:0011216,5.05e-09,194;UBERON:0002950,1.32e-08,4;UBERON:0001891,1.32e-08,4;UBERON:0009616,1.32e-08,4;UBERON:0010286,1.32e-08,4;UBERON:0003076,1.06e-07,12;UBERON:0003057,1.06e-07,12;UBERON:0004684,5.52e-07,3;UBERON:0002275,5.52e-07,3;UBERON:0002038,9.31e-07,3;UBERON:0009663,9.31e-07,3;UBERON:0009661,9.31e-07,3;UBERON:0000125,9.31e-07,3;UBERON:0002308,9.31e-07,3 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.506884656097573,0.367093504323363,0,0.436050312760893,0.439372365468944,0.58328969722285,0,0,0,0,0,0,0,0.515672092277442,2.02316460859598,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.725827286159344,0.675029691658453,0.210324961351382,0.571301968807607,0.883474163806454,0.734944795289724,0.191690942036473,0.919218786610021,3.30347642998166,4.46905683298157,4.91540906419979,0.923204014111357,1.09785172322892,1.56274011167028,2.51264699101243,2.25105044012672,4.27835093775068,0.589257170947335,2.13557521198654,1.67759501242771,0.605809546665472,0.982430281388212,0,0,0,0,0,0,0.280888840263504,0,0,0,2.67602497575693,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,1.46390398505774,1.46612694769419,0,0,0,0,6.14141621559773,9.15001205637253,2.01046963380583,14.2535942557667,10.2286182932132,7.06479351502504,12.0058534670141,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,8.62188789112922,0.720332286654991,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,9.15138362930414,7.14991288212439,0,1.00988370881749,0,1.56175497718655,0.646270193198397,0.955875191810208,0.891194696329576,2.83076530788832,0.809621403349789,0.876767573733936,0.395287777946524,6.74774764485795,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0,0.119372344003136,0.328281799490123,0,10.9400928186201,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0,0.330916980914195,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,14.6835479080437,11.0478056761722,6.30185064783336,8.76451229952807,8.22099023724771,9.06472676867641,8.77529250301348,8.10578165803597,10.8754178156209,11.9084871702919,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0.192075457214608,0.516919220600519,0,0.811190281613988,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.859484216193193,0.57386499620653,0.882365676478062,0.463735671240843 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.506884656097573,0.367093504323363,0,0.436050312760893,0.439372365468944,0.58328969722285,0,0,0,0,0,0,0,0.515672092277442,2.02316460859598,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.725827286159344,0.675029691658453,0.210324961351382,0.571301968807607,0.883474163806454,0.734944795289724,0.191690942036473,0.919218786610021,3.30347642998166,4.46905683298157,4.91540906419979,0.923204014111357,1.09785172322892,1.56274011167028,2.51264699101243,2.25105044012672,4.27835093775068,0.589257170947335,2.13557521198654,1.67759501242771,0.605809546665472,0.982430281388212,0,0,0,0,0,0,0.280888840263504,0,0,0,2.67602497575693,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,1.46390398505774,1.46612694769419,0,0,0,0,6.14141621559773,9.15001205637253,2.01046963380583,14.2535942557667,10.2286182932132,7.06479351502504,12.0058534670141,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,8.62188789112922,0.720332286654991,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,9.15138362930414,7.14991288212439,0,1.00988370881749,0,1.56175497718655,0.646270193198397,0.955875191810208,0.891194696329576,2.83076530788832,0.809621403349789,0.876767573733936,0.395287777946524,6.74774764485795,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0,0.119372344003136,0.328281799490123,0,10.9400928186201,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0,0.330916980914195,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,14.6835479080437,11.0478056761722,6.30185064783336,8.76451229952807,8.22099023724771,9.06472676867641,8.77529250301348,8.10578165803597,10.8754178156209,11.9084871702919,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0.192075457214608,0.516919220600519,0,0.811190281613988,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.859484216193193,0.57386499620653,0.882365676478062,0.463735671240843 | ||
|short_description=p3@Nkain2 | |short_description=p3@Nkain2 | ||
}} | }} |
Latest revision as of 22:59, 25 September 2015
Short description: | p3@Nkain2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nkain2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -86bp_to_NM_001013411, NM_001025286, uc007etw.2, uc007ety.2_5end |
EntrezGene: | Nkain2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.43e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.43e-10 | 23 |
neuron | 8.08e-09 | 33 |
neuronal stem cell | 8.08e-09 | 33 |
neuroblast | 8.08e-09 | 33 |
electrically signaling cell | 8.08e-09 | 33 |
electrically responsive cell | 3.90e-08 | 39 |
electrically active cell | 3.90e-08 | 39 |
raphe nuclei neuron | 5.52e-07 | 3 |
ectodermal cell | 6.29e-07 | 44 |
neurectodermal cell | 6.29e-07 | 44 |
neuron of the substantia nigra | 9.31e-07 | 3 |