Personal tools

FFCP PHASE1:Mm9::chr2:165060189..165060250,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=104010
|EntrezGene=104010
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9WTP5
|UniProt=Q9WTP5
|association_with_transcript=0bp_to_NM_174988,uc008nxc.2_5end
|association_with_transcript=0bp_to_NM_174988,uc008nxc.2_5end
|cluster_id=chr2:165060189..165060250,-
|description=CAGE_peak_1_at_Cdh22_5end
|description=CAGE_peak_1_at_Cdh22_5end
|id=chr2:165060189..165060250,-
|id=chr2:165060189..165060250,-
|ontology_enrichment_celltype=CL:0000117!1.54e-12!23;CL:0000337!1.54e-12!23;CL:0000221!1.60e-10!44;CL:0000133!1.60e-10!44;CL:0002319!1.77e-10!43;CL:0000055!1.26e-07!50;CL:0000540!3.99e-07!33;CL:0000047!3.99e-07!33;CL:0000031!3.99e-07!33;CL:0000404!3.99e-07!33
|ontology_enrichment_celltype=CL:0000117!1.54e-12!23;CL:0000337!1.54e-12!23;CL:0000221!1.60e-10!44;CL:0000133!1.60e-10!44;CL:0002319!1.77e-10!43;CL:0000055!1.26e-07!50;CL:0000540!3.99e-07!33;CL:0000047!3.99e-07!33;CL:0000031!3.99e-07!33;CL:0000404!3.99e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.19e-15,23;CL:0000337,3.19e-15,23;CL:0002319,2.98e-13,43;CL:0000221,9.36e-13,44;CL:0000133,9.36e-13,44;CL:0000540,9.14e-09,33;CL:0000047,9.14e-09,33;CL:0000031,9.14e-09,33;CL:0000404,9.14e-09,33;CL:0002453,7.98e-08,8;CL:0000393,2.97e-07,39;CL:0000211,2.97e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!6.22e-29!63;UBERON:0001017!9.22e-29!73;UBERON:0005743!9.22e-29!73;UBERON:0000073!2.13e-28!75;UBERON:0001016!2.13e-28!75;UBERON:0004121!2.21e-28!102;UBERON:0000924!2.21e-28!102;UBERON:0006601!2.21e-28!102;UBERON:0001049!5.42e-28!52;UBERON:0005068!5.42e-28!52;UBERON:0006241!5.42e-28!52;UBERON:0007135!5.42e-28!52;UBERON:0002346!6.40e-28!71;UBERON:0003075!6.40e-28!71;UBERON:0007284!6.40e-28!71;UBERON:0000955!1.87e-26!50;UBERON:0006238!1.87e-26!50;UBERON:0002616!1.32e-25!49;UBERON:0003056!1.48e-21!49;UBERON:0003080!1.97e-19!40;UBERON:0002780!1.17e-18!39;UBERON:0001890!1.17e-18!39;UBERON:0006240!1.17e-18!39;UBERON:0002020!1.61e-18!34;UBERON:0007811!3.10e-16!86;UBERON:0002791!2.83e-15!29;UBERON:0003528!2.83e-15!29;UBERON:0001893!2.83e-15!29;UBERON:0000153!1.84e-14!94;UBERON:0000956!1.62e-10!21;UBERON:0001869!1.62e-10!21;UBERON:0000203!1.62e-10!21;UBERON:0002619!6.09e-10!17;UBERON:0003076!4.21e-09!12;UBERON:0003057!4.21e-09!12;UBERON:0002021!1.23e-07!10;UBERON:0000411!1.23e-07!10;UBERON:0001950!1.23e-07!10;UBERON:0004111!5.51e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.94e-40,73;UBERON:0000073,1.41e-38,54;UBERON:0001016,1.78e-38,75;UBERON:0002346,6.14e-38,64;UBERON:0003075,6.14e-38,64;UBERON:0007284,6.14e-38,64;UBERON:0001049,1.10e-36,52;UBERON:0005068,1.10e-36,52;UBERON:0006241,1.10e-36,52;UBERON:0007135,1.10e-36,52;UBERON:0004121,7.44e-36,95;UBERON:0000924,7.44e-36,95;UBERON:0006601,7.44e-36,95;UBERON:0010371,3.63e-31,73;UBERON:0000955,3.89e-31,47;UBERON:0006238,3.89e-31,47;UBERON:0002616,7.58e-30,46;UBERON:0003056,5.26e-27,49;UBERON:0002020,1.50e-23,34;UBERON:0010314,2.28e-23,92;UBERON:0003080,2.54e-23,40;UBERON:0002780,3.83e-22,39;UBERON:0001890,3.83e-22,39;UBERON:0006240,3.83e-22,39;UBERON:0003528,1.92e-18,29;UBERON:0002791,1.92e-18,29;UBERON:0001893,1.92e-18,29;UBERON:0003076,5.24e-14,12;UBERON:0003057,5.24e-14,12;UBERON:0002619,1.24e-12,17;UBERON:0002021,1.37e-11,10;UBERON:0000411,1.37e-11,10;UBERON:0001950,1.37e-11,10;UBERON:0000025,1.81e-11,114;UBERON:0000956,4.32e-11,21;UBERON:0001869,4.32e-11,21;UBERON:0000203,4.32e-11,21;UBERON:0004111,1.91e-10,122;UBERON:0002420,4.86e-09,8;UBERON:0007245,4.86e-09,8;UBERON:0010009,4.86e-09,8;UBERON:0010011,4.86e-09,8;UBERON:0000454,4.86e-09,8;UBERON:0004733,8.85e-08,6;UBERON:0004732,8.85e-08,6;UBERON:0002028,8.85e-08,6;UBERON:0007277,8.85e-08,6;UBERON:0002240,9.60e-08,6;UBERON:0005174,9.60e-08,6;UBERON:0001137,9.60e-08,6
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,2.18025156380447,3.73466510648602,3.11087838518853,2.09979632438044,4.31257693094915,0,0,0,0,0,1.03134418455488,10.5204559646991,13.2247744818008,6.97214543856797,1.69422266034566,0,0,0.988866362566974,0,8.08920298399693,5.37905627450176,0.311068836925433,0.540023753326763,0.841299845405528,11.4260393761521,8.61387309711293,1.46988959057945,1.72521847832825,0.919218786610021,5.50579404996943,6.12899222808901,7.98753972932466,5.67111037239834,5.76372154695181,4.68822033501084,9.77140496504833,11.8180148106653,9.0150966188318,8.54422897873636,6.83384067835694,4.47358669980721,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,2.22663208597237,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.879666139307728,0,0,0,0,0.220841518460394,0,0,16.9812862266697,16.7557365450764,0,0,0,0.127070227073065,13.1815762676244,4.57500602818627,3.64397621127307,12.3415267336516,8.95004100656157,6.85700547046548,7.62533936418461,0.101839363850316,0.124406970610093,0,0.210441855886474,0,1.14951052216736,2.52086981727489,2.56198190320716,4.96666443804693,3.20284300712124,2.71735001223214,1.81092359517311,0.215567992932842,0,0.175951124163949,0,0.556094498451196,0.696504333044333,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.134206418760372,4.20579897128254,0.823236899034275,0,0,0,0.696710015581316,0.902072229254653,0.403367049246685,0.667134131534611,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0.758671603812327,0.342745537829186,0,0.407302655690628,0.387904974335251,0.49095073923223,0.948548056863859,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.651859905768103,0.848725428875941,1.40814148973101,0.670025029767263,0,0.195133647857799,1.41871629695572,0.8858587585951,0.478364305972461,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0,10.7568895291821,9.02529986759964,0.163934945376675,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0.790575555893047,15.1021018718249,0.425820255624806,0.534196811001766,0,1.48473110675282,0,0.728341908464944,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.900305470156551,1.68166288917581,1.07168517515796,1.24138163549592,1.07021290561242,1.48094118541909,2.13125464380219,0,0,0.220528398054962,0,0.645857706783622,0.180938774784468,0,0,0,13.5360470467672,0,0.206386867963223,0,0,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0,0,0.609958401380546,0.540026704109006,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0.358053391334963,0,0,0,0,0.228620419965,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.906921534460845,0,0.986852422704233,0.167884616364078,1.73870634628971,0,0,0,0,3.95326289831947,7.82552902062201,6.87474616127276,7.90524638780963,8.90607275701835,7.55393897389701,10.8003600037089,6.75481804836331,9.5159905886683,10.8729665467882,0.31136204275253,2.79317411380722,1.70733605754134,1.21553358534147,0.419226325255965,0.551530525350042,1.11123363900808,1.44224540067226,0.962757628775446,0.505394423527595,0.760437899670719,1.13175804831646,1.21733959710847,0.960377286073039,0.746661096422973,1.90517476513229,0.695305955669133,0.578727661391115,0.412085900803307,1.03039244094078,0.685738504770831,0.887379030796687,1.43061713968393,0.581385666529314,0.564656282491984,1.01537529470012,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,1.18635018124174,0.788035859004508,0.818462086339379,1.39443157067369,0.385813221962283,3.74715866906919,0.935726433781634,1.07435527024149,0.382576664137687,0.220591419119515,0
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,2.18025156380447,3.73466510648602,3.11087838518853,2.09979632438044,4.31257693094915,0,0,0,0,0,1.03134418455488,10.5204559646991,13.2247744818008,6.97214543856797,1.69422266034566,0,0,0.988866362566974,0,8.08920298399693,5.37905627450176,0.311068836925433,0.540023753326763,0.841299845405528,11.4260393761521,8.61387309711293,1.46988959057945,1.72521847832825,0.919218786610021,5.50579404996943,6.12899222808901,7.98753972932466,5.67111037239834,5.76372154695181,4.68822033501084,9.77140496504833,11.8180148106653,9.0150966188318,8.54422897873636,6.83384067835694,4.47358669980721,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,2.22663208597237,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.879666139307728,0,0,0,0,0.220841518460394,0,0,16.9812862266697,16.7557365450764,0,0,0,0.127070227073065,13.1815762676244,4.57500602818627,3.64397621127307,12.3415267336516,8.95004100656157,6.85700547046548,7.62533936418461,0.101839363850316,0.124406970610093,0,0.210441855886474,0,1.14951052216736,2.52086981727489,2.56198190320716,4.96666443804693,3.20284300712124,2.71735001223214,1.81092359517311,0.215567992932842,0,0.175951124163949,0,0.556094498451196,0.696504333044333,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.134206418760372,4.20579897128254,0.823236899034275,0,0,0,0.696710015581316,0.902072229254653,0.403367049246685,0.667134131534611,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0.758671603812327,0.342745537829186,0,0.407302655690628,0.387904974335251,0.49095073923223,0.948548056863859,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.651859905768103,0.848725428875941,1.40814148973101,0.670025029767263,0,0.195133647857799,1.41871629695572,0.8858587585951,0.478364305972461,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0,10.7568895291821,9.02529986759964,0.163934945376675,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0.790575555893047,15.1021018718249,0.425820255624806,0.534196811001766,0,1.48473110675282,0,0.728341908464944,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.900305470156551,1.68166288917581,1.07168517515796,1.24138163549592,1.07021290561242,1.48094118541909,2.13125464380219,0,0,0.220528398054962,0,0.645857706783622,0.180938774784468,0,0,0,13.5360470467672,0,0.206386867963223,0,0,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0,0,0.609958401380546,0.540026704109006,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0.358053391334963,0,0,0,0,0.228620419965,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.906921534460845,0,0.986852422704233,0.167884616364078,1.73870634628971,0,0,0,0,3.95326289831947,7.82552902062201,6.87474616127276,7.90524638780963,8.90607275701835,7.55393897389701,10.8003600037089,6.75481804836331,9.5159905886683,10.8729665467882,0.31136204275253,2.79317411380722,1.70733605754134,1.21553358534147,0.419226325255965,0.551530525350042,1.11123363900808,1.44224540067226,0.962757628775446,0.505394423527595,0.760437899670719,1.13175804831646,1.21733959710847,0.960377286073039,0.746661096422973,1.90517476513229,0.695305955669133,0.578727661391115,0.412085900803307,1.03039244094078,0.685738504770831,0.887379030796687,1.43061713968393,0.581385666529314,0.564656282491984,1.01537529470012,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,1.18635018124174,0.788035859004508,0.818462086339379,1.39443157067369,0.385813221962283,3.74715866906919,0.935726433781634,1.07435527024149,0.382576664137687,0.220591419119515,0
|short_description=p1@Cdh22
|short_description=p1@Cdh22
}}
}}

Latest revision as of 04:06, 26 September 2015

Short description:p1@Cdh22
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cdh22_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_174988, uc008nxc.2_5end
EntrezGene:Cdh22
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cdh22

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I216.76
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A413.18
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D512.34
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C64.97
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.76
medulla oblongata, neonate N30.CNhs11200.1396-42A39.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I915.10
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.54
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.94e-4073
regional part of nervous system1.41e-3854
nervous system1.78e-3875
neurectoderm6.14e-3864
neural plate6.14e-3864
presumptive neural plate6.14e-3864
neural tube1.10e-3652
neural rod1.10e-3652
future spinal cord1.10e-3652
neural keel1.10e-3652
ectoderm-derived structure7.44e-3695
ectoderm7.44e-3695
presumptive ectoderm7.44e-3695
ecto-epithelium3.63e-3173
brain3.89e-3147
future brain3.89e-3147
regional part of brain7.58e-3046
pre-chordal neural plate5.26e-2749
gray matter1.50e-2334
structure with developmental contribution from neural crest2.28e-2392
anterior neural tube2.54e-2340
regional part of forebrain3.83e-2239
forebrain3.83e-2239
future forebrain3.83e-2239
brain grey matter1.92e-1829
regional part of telencephalon1.92e-1829
telencephalon1.92e-1829
posterior neural tube5.24e-1412
chordal neural plate5.24e-1412
regional part of cerebral cortex1.24e-1217
occipital lobe1.37e-1110
visual cortex1.37e-1110
neocortex1.37e-1110
tube1.81e-11114
cerebral cortex4.32e-1121
cerebral hemisphere4.32e-1121
pallium4.32e-1121
anatomical conduit1.91e-10122
basal ganglion4.86e-098
nuclear complex of neuraxis4.86e-098
aggregate regional part of brain4.86e-098
collection of basal ganglia4.86e-098
cerebral subcortex4.86e-098
segmental subdivision of hindbrain8.85e-086
segmental subdivision of nervous system8.85e-086
hindbrain8.85e-086
presumptive hindbrain8.85e-086
spinal cord9.60e-086
dorsal region element9.60e-086
dorsum9.60e-086
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:165060189..165060250,-&oldid=4232159"