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FFCP PHASE1:Mm9::chr5:38550963..38550982,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18196
|EntrezGene=18196
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q62092
|UniProt=Q62092
|association_with_transcript=-257bp_to_ENSMUST00000031009,NM_010942,uc008xga.1_5end
|association_with_transcript=-257bp_to_ENSMUST00000031009,NM_010942,uc008xga.1_5end
|cluster_id=chr5:38550963..38550982,-
|description=CAGE_peak_6_at_Nsg1_5end
|description=CAGE_peak_6_at_Nsg1_5end
|id=chr5:38550963..38550982,-
|id=chr5:38550963..38550982,-
|ontology_enrichment_celltype=CL:0000117!2.40e-16!23;CL:0000337!2.40e-16!23;CL:0000393!1.64e-15!39;CL:0000211!1.64e-15!39;CL:0000540!3.33e-15!33;CL:0000047!3.33e-15!33;CL:0000031!3.33e-15!33;CL:0000404!3.33e-15!33;CL:0000221!8.34e-14!44;CL:0000133!8.34e-14!44;CL:0000055!9.18e-14!50;CL:0002319!9.63e-14!43;CL:0002321!5.75e-07!70;CL:0000220!5.75e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-28,23;CL:0000337,1.09e-28,23;CL:0000540,1.93e-18,33;CL:0000047,1.93e-18,33;CL:0000031,1.93e-18,33;CL:0000404,1.93e-18,33;CL:0000393,1.79e-16,39;CL:0000211,1.79e-16,39;CL:0002319,5.46e-13,43;CL:0000221,1.39e-12,44;CL:0000133,1.39e-12,44;CL:0002609,1.92e-10,6;CL:0002321,5.79e-07,70;CL:0002614,6.50e-07,3;CL:0002610,8.16e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.47e-34!73;UBERON:0005743!3.47e-34!73;UBERON:0000073!2.44e-33!75;UBERON:0001016!2.44e-33!75;UBERON:0001049!1.02e-28!52;UBERON:0005068!1.02e-28!52;UBERON:0006241!1.02e-28!52;UBERON:0007135!1.02e-28!52;UBERON:0004121!1.15e-28!102;UBERON:0000924!1.15e-28!102;UBERON:0006601!1.15e-28!102;UBERON:0002346!1.22e-28!71;UBERON:0003075!1.22e-28!71;UBERON:0007284!1.22e-28!71;UBERON:0000955!4.33e-28!50;UBERON:0006238!4.33e-28!50;UBERON:0002616!1.87e-27!49;UBERON:0000033!1.65e-26!63;UBERON:0002020!8.53e-23!34;UBERON:0003080!2.66e-22!40;UBERON:0003056!3.55e-22!49;UBERON:0002780!1.30e-21!39;UBERON:0001890!1.30e-21!39;UBERON:0006240!1.30e-21!39;UBERON:0002791!3.96e-20!29;UBERON:0003528!3.96e-20!29;UBERON:0001893!3.96e-20!29;UBERON:0000956!2.97e-14!21;UBERON:0001869!2.97e-14!21;UBERON:0000203!2.97e-14!21;UBERON:0007811!1.75e-13!86;UBERON:0000153!1.91e-13!94;UBERON:0002619!2.33e-11!17;UBERON:0002021!1.61e-09!10;UBERON:0000411!1.61e-09!10;UBERON:0001950!1.61e-09!10;UBERON:0000025!7.58e-08!114;UBERON:0004111!2.64e-07!122;UBERON:0002420!4.58e-07!8;UBERON:0007245!4.58e-07!8;UBERON:0010009!4.58e-07!8;UBERON:0010011!4.58e-07!8;UBERON:0000454!4.58e-07!8;UBERON:0003076!7.14e-07!12;UBERON:0003057!7.14e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.08e-46,54;UBERON:0001049,1.21e-42,52;UBERON:0005068,1.21e-42,52;UBERON:0006241,1.21e-42,52;UBERON:0007135,1.21e-42,52;UBERON:0002020,3.70e-40,34;UBERON:0003528,1.25e-38,29;UBERON:0002791,1.25e-38,29;UBERON:0001893,1.25e-38,29;UBERON:0001017,1.45e-38,73;UBERON:0002616,2.02e-38,46;UBERON:0000955,1.98e-37,47;UBERON:0006238,1.98e-37,47;UBERON:0001016,2.73e-37,75;UBERON:0003080,7.07e-34,40;UBERON:0002346,5.20e-33,64;UBERON:0003075,5.20e-33,64;UBERON:0007284,5.20e-33,64;UBERON:0002780,2.18e-32,39;UBERON:0001890,2.18e-32,39;UBERON:0006240,2.18e-32,39;UBERON:0010371,7.29e-28,73;UBERON:0000956,1.04e-27,21;UBERON:0001869,1.04e-27,21;UBERON:0000203,1.04e-27,21;UBERON:0004121,1.80e-27,95;UBERON:0000924,1.80e-27,95;UBERON:0006601,1.80e-27,95;UBERON:0003056,2.64e-26,49;UBERON:0002619,5.17e-21,17;UBERON:0010314,2.63e-20,92;UBERON:0002021,2.89e-20,10;UBERON:0000411,2.89e-20,10;UBERON:0001950,2.89e-20,10;UBERON:0000025,8.88e-16,114;UBERON:0004111,3.65e-14,122;UBERON:0002420,1.16e-11,8;UBERON:0007245,1.16e-11,8;UBERON:0010009,1.16e-11,8;UBERON:0010011,1.16e-11,8;UBERON:0000454,1.16e-11,8;UBERON:0003076,9.39e-09,12;UBERON:0003057,9.39e-09,12;UBERON:0011216,1.28e-08,194;UBERON:0002950,2.48e-08,4;UBERON:0001891,2.48e-08,4;UBERON:0009616,2.48e-08,4;UBERON:0010286,2.48e-08,4;UBERON:0000483,2.53e-07,174;UBERON:0000119,3.83e-07,176;UBERON:0002038,6.50e-07,3;UBERON:0009663,6.50e-07,3;UBERON:0009661,6.50e-07,3;UBERON:0000125,6.50e-07,3;UBERON:0002308,6.50e-07,3;UBERON:0004684,8.16e-07,3;UBERON:0002275,8.16e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.912392380975631,1.46837401729345,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,0,3.03474691289397,4.7609188134483,0.633831403506179,0.677689064138264,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,1.55534418462716,2.16009501330705,2.3135745748652,0.285650984403804,1.54607978666129,1.22490799214954,2.01275489138296,1.83843757322004,2.20231761998777,4.34136949489638,3.07213066512487,2.1101806036831,1.82975287204819,2.08365348222704,6.42120897703176,3.37657566019008,1.83357897332172,1.47314292736834,1.28134512719193,0.931997229126503,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.46390398505774,3.35114730901528,0,0,0,0,1.64769703345305,10.0650132620098,0.753926112677186,5.04090528557602,4.60287823194595,2.90903262383384,6.32740925964255,0,0,0,0,0.390361328888111,0.229902104433473,0.360124259610698,0.30140963567143,0.0680364991513279,0,0.187403449119458,0.517406741478031,0.862271971731369,0,1.05570674498369,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.52347938276953,0.92614151141356,0.330418782983798,0,0.426576501070468,0,0,0,0,0,0,0,0.502670417600539,0,0.19496408711912,0,0,0,0,0.342745537829186,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0.315270288212382,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,2.56880943980467,2.46144541843627,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0,0.395287777946524,0.963963949265421,0,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.388076051348264,0.857348140126369,0,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0.661585194164886,0.16488625294148,0.161464426695906,0,0,0,0.291480836629851,3.33765543618917,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0.954670618015114,0.316335993581135,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,2.25900737046827,3.68260189205742,2.29158205375759,3.60891682921744,5.48066015816514,4.5323633843382,4.05013500139084,3.60256962579376,6.79713613476307,4.65984280576638,0,0,0.682934423016537,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.256100609619477,0.287177344778066,0,0.115884325944855,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0.355905054372522,0.197008964751127,1.63692417267876,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.912392380975631,1.46837401729345,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,0,3.03474691289397,4.7609188134483,0.633831403506179,0.677689064138264,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,1.55534418462716,2.16009501330705,2.3135745748652,0.285650984403804,1.54607978666129,1.22490799214954,2.01275489138296,1.83843757322004,2.20231761998777,4.34136949489638,3.07213066512487,2.1101806036831,1.82975287204819,2.08365348222704,6.42120897703176,3.37657566019008,1.83357897332172,1.47314292736834,1.28134512719193,0.931997229126503,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.46390398505774,3.35114730901528,0,0,0,0,1.64769703345305,10.0650132620098,0.753926112677186,5.04090528557602,4.60287823194595,2.90903262383384,6.32740925964255,0,0,0,0,0.390361328888111,0.229902104433473,0.360124259610698,0.30140963567143,0.0680364991513279,0,0.187403449119458,0.517406741478031,0.862271971731369,0,1.05570674498369,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.52347938276953,0.92614151141356,0.330418782983798,0,0.426576501070468,0,0,0,0,0,0,0,0.502670417600539,0,0.19496408711912,0,0,0,0,0.342745537829186,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0.315270288212382,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,2.56880943980467,2.46144541843627,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0,0.395287777946524,0.963963949265421,0,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.388076051348264,0.857348140126369,0,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0.661585194164886,0.16488625294148,0.161464426695906,0,0,0,0.291480836629851,3.33765543618917,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0.954670618015114,0.316335993581135,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,2.25900737046827,3.68260189205742,2.29158205375759,3.60891682921744,5.48066015816514,4.5323633843382,4.05013500139084,3.60256962579376,6.79713613476307,4.65984280576638,0,0,0.682934423016537,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.256100609619477,0.287177344778066,0,0.115884325944855,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0.355905054372522,0.197008964751127,1.63692417267876,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0
|short_description=p6@Nsg1
|short_description=p6@Nsg1
}}
}}

Latest revision as of 00:36, 26 September 2015

Short description:p6@Nsg1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Nsg1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -257bp_to_ENSMUST00000031009, NM_010942, uc008xga.1_5end
EntrezGene:Nsg1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Nsg1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.08e-4654
neural tube1.21e-4252
neural rod1.21e-4252
future spinal cord1.21e-4252
neural keel1.21e-4252
gray matter3.70e-4034
brain grey matter1.25e-3829
regional part of telencephalon1.25e-3829
telencephalon1.25e-3829
central nervous system1.45e-3873
regional part of brain2.02e-3846
brain1.98e-3747
future brain1.98e-3747
nervous system2.73e-3775
anterior neural tube7.07e-3440
neurectoderm5.20e-3364
neural plate5.20e-3364
presumptive neural plate5.20e-3364
regional part of forebrain2.18e-3239
forebrain2.18e-3239
future forebrain2.18e-3239
ecto-epithelium7.29e-2873
cerebral cortex1.04e-2721
cerebral hemisphere1.04e-2721
pallium1.04e-2721
ectoderm-derived structure1.80e-2795
ectoderm1.80e-2795
presumptive ectoderm1.80e-2795
pre-chordal neural plate2.64e-2649
regional part of cerebral cortex5.17e-2117
structure with developmental contribution from neural crest2.63e-2092
occipital lobe2.89e-2010
visual cortex2.89e-2010
neocortex2.89e-2010
tube8.88e-16114
anatomical conduit3.65e-14122
basal ganglion1.16e-118
nuclear complex of neuraxis1.16e-118
aggregate regional part of brain1.16e-118
collection of basal ganglia1.16e-118
cerebral subcortex1.16e-118
posterior neural tube9.39e-0912
chordal neural plate9.39e-0912
organ system subdivision1.28e-08194
regional part of midbrain2.48e-084
midbrain2.48e-084
presumptive midbrain2.48e-084
midbrain neural tube2.48e-084
epithelium2.53e-07174
cell layer3.83e-07176
substantia nigra6.50e-073
telencephalic nucleus6.50e-073
midbrain nucleus6.50e-073
neural nucleus6.50e-073
nucleus of brain6.50e-073
raphe nuclei8.16e-073
reticular formation8.16e-073
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