FFCP PHASE1:Hg19::chr4:151502911..151502924,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000306!1.54e-12!4;CL:0002222!1.54e-12!4;CL:0002224!1.54e-12!4;CL:0000064!5.12e-10!3;CL:0005012!5.12e-10!3;CL:0000067!5.12e-10!3;CL:0002304!5.12e-10!3;CL:0002586!2.78e-09!3;CL:0002504!3.30e-09!3;CL:1000279!3.30e-09!3;CL:1000280!3.30e-09!3;CL:0000153!8.21e-08!9;CL:0000447!8.21e-08!9;CL:0000149!4.72e-07!4 | |ontology_enrichment_celltype=CL:0000306!1.54e-12!4;CL:0002222!1.54e-12!4;CL:0002224!1.54e-12!4;CL:0000064!5.12e-10!3;CL:0005012!5.12e-10!3;CL:0000067!5.12e-10!3;CL:0002304!5.12e-10!3;CL:0002586!2.78e-09!3;CL:0002504!3.30e-09!3;CL:1000279!3.30e-09!3;CL:1000280!3.30e-09!3;CL:0000153!8.21e-08!9;CL:0000447!8.21e-08!9;CL:0000149!4.72e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000333;6.55e-17;5!CL:0002556;1.89e-13;6!CL:0000064;1.18e-12;3!CL:0000067;1.18e-12;3!CL:0005012;1.18e-12;3!CL:0002304;1.18e-12;3!CL:0000306;1.03e-09;4!CL:0002222;1.03e-09;4!CL:0002224;1.03e-09;4!CL:0000062;1.98e-09;9!CL:0002552;8.61e-08;5 | |ontology_enrichment_celltype_v019=CL:0000333;6.55e-17;5!CL:0002556;1.89e-13;6!CL:0000064;1.18e-12;3!CL:0000067;1.18e-12;3!CL:0005012;1.18e-12;3!CL:0002304;1.18e-12;3!CL:0000306;1.03e-09;4!CL:0002222;1.03e-09;4!CL:0002224;1.03e-09;4!CL:0000062;1.98e-09;9!CL:0002552;8.61e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002556,1.89e-13,6;CL:0000064,1.68e-12,3;CL:0000067,1.68e-12,3;CL:0005012,1.68e-12,3;CL:0002304,1.68e-12,3;CL:0000306,1.07e-09,4;CL:0002222,1.07e-09,4;CL:0002224,1.07e-09,4;CL:0002552,6.54e-08,5;CL:0000062,8.63e-08,11;CL:0000375,8.63e-08,11;CL:0000335,8.63e-08,11 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.59e-10;1!UBERON:0003852;2.59e-10;1!CL:0000335;8.42e-08;11 | |ontology_enrichment_development_v019=UBERON:0003099;2.59e-10;1!UBERON:0003852;2.59e-10;1!CL:0000335;8.42e-08;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;3.46e-14;6!DOID:171;1.03e-08;10 | |ontology_enrichment_disease_v019=DOID:169;3.46e-14;6!DOID:171;1.03e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:169,3.17e-14,6;DOID:171,9.76e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0007625!9.11e-31!11;UBERON:0001456!3.37e-21!21;UBERON:0000019!5.42e-20!19;UBERON:0000047!5.42e-20!19;UBERON:0004088!5.42e-20!19;UBERON:0003072!5.42e-20!19;UBERON:0003071!5.42e-20!19;UBERON:0004128!5.42e-20!19;UBERON:0000970!7.59e-19!20;UBERON:0002104!8.26e-18!21;UBERON:0001444!9.75e-18!48;UBERON:0000020!5.22e-16!23;UBERON:0001032!3.20e-15!24;UBERON:0004456!3.20e-15!24;UBERON:0000063!5.29e-13!97;UBERON:0001801!1.37e-12!14;UBERON:0010077!1.54e-12!4;UBERON:0005389!1.54e-12!4;UBERON:0000484!1.54e-12!4;UBERON:0002546!1.54e-12!4;UBERON:0000965!1.54e-12!4;UBERON:0001803!1.54e-12!4;UBERON:0003073!1.54e-12!4;UBERON:0005426!1.54e-12!4;UBERON:0000488!2.26e-12!4;UBERON:0005085!4.16e-12!29;UBERON:0000059!6.81e-12!11;UBERON:0001155!7.24e-11!9;UBERON:0000160!3.76e-10!27;UBERON:0001778!5.12e-10!3;UBERON:0001775!5.12e-10!3;UBERON:0000966!1.61e-09!5;UBERON:0005388!1.61e-09!5;UBERON:0001802!1.61e-09!5;UBERON:0001781!2.78e-09!3;UBERON:0001782!2.78e-09!3;UBERON:0005424!2.78e-09!3;UBERON:0000033!5.24e-09!123;UBERON:0000988!1.56e-08!3;UBERON:0000153!2.60e-08!129;UBERON:0007811!2.60e-08!129;UBERON:0002203!3.09e-08!6;UBERON:0001768!3.09e-08!6;UBERON:0002298!3.15e-08!8;UBERON:0004121!1.58e-07!169;UBERON:0005409!2.21e-07!35;UBERON:0000924!3.36e-07!173;UBERON:0006601!3.36e-07!173;UBERON:0003075!4.86e-07!86;UBERON:0007284!4.86e-07!86 | |ontology_enrichment_uberon=UBERON:0007625!9.11e-31!11;UBERON:0001456!3.37e-21!21;UBERON:0000019!5.42e-20!19;UBERON:0000047!5.42e-20!19;UBERON:0004088!5.42e-20!19;UBERON:0003072!5.42e-20!19;UBERON:0003071!5.42e-20!19;UBERON:0004128!5.42e-20!19;UBERON:0000970!7.59e-19!20;UBERON:0002104!8.26e-18!21;UBERON:0001444!9.75e-18!48;UBERON:0000020!5.22e-16!23;UBERON:0001032!3.20e-15!24;UBERON:0004456!3.20e-15!24;UBERON:0000063!5.29e-13!97;UBERON:0001801!1.37e-12!14;UBERON:0010077!1.54e-12!4;UBERON:0005389!1.54e-12!4;UBERON:0000484!1.54e-12!4;UBERON:0002546!1.54e-12!4;UBERON:0000965!1.54e-12!4;UBERON:0001803!1.54e-12!4;UBERON:0003073!1.54e-12!4;UBERON:0005426!1.54e-12!4;UBERON:0000488!2.26e-12!4;UBERON:0005085!4.16e-12!29;UBERON:0000059!6.81e-12!11;UBERON:0001155!7.24e-11!9;UBERON:0000160!3.76e-10!27;UBERON:0001778!5.12e-10!3;UBERON:0001775!5.12e-10!3;UBERON:0000966!1.61e-09!5;UBERON:0005388!1.61e-09!5;UBERON:0001802!1.61e-09!5;UBERON:0001781!2.78e-09!3;UBERON:0001782!2.78e-09!3;UBERON:0005424!2.78e-09!3;UBERON:0000033!5.24e-09!123;UBERON:0000988!1.56e-08!3;UBERON:0000153!2.60e-08!129;UBERON:0007811!2.60e-08!129;UBERON:0002203!3.09e-08!6;UBERON:0001768!3.09e-08!6;UBERON:0002298!3.15e-08!8;UBERON:0004121!1.58e-07!169;UBERON:0005409!2.21e-07!35;UBERON:0000924!3.36e-07!173;UBERON:0006601!3.36e-07!173;UBERON:0003075!4.86e-07!86;UBERON:0007284!4.86e-07!86 | ||
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|short_description=p5@LRBA | |short_description=p5@LRBA | ||
}} | }} |
Revision as of 12:30, 17 November 2012
Short description: | p5@LRBA |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LRBA_5end |
Coexpression cluster: | C1272_medulloblastoma_neuroblastoma_colon_Osteoblast_normal_Ciliary_pons |
Association with transcript: | -37bp_to_ENST00000503716, uc003ils.3_5end |
EntrezGene: | LRBA |
HGNC: | 1742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 1.89e-13 | 6 |
ciliated cell | 1.68e-12 | 3 |
ciliated epithelial cell | 1.68e-12 | 3 |
multi-ciliated epithelial cell | 1.68e-12 | 3 |
non-pigmented ciliary epithelial cell | 1.68e-12 | 3 |
crystallin accumulating cell | 1.07e-09 | 4 |
vertebrate lens cell | 1.07e-09 | 4 |
lens epithelial cell | 1.07e-09 | 4 |
fibroblast of gingiva | 6.54e-08 | 5 |
osteoblast | 8.63e-08 | 11 |
osteoprogenitor cell | 8.63e-08 | 11 |
mesenchyme condensation cell | 8.63e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.17e-14 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.