FFCP PHASE1:Hg19::chr4:103940791..103940883,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!1.35e-28!172;CL:0000566!1.35e-28!172;CL:0000988!7.42e-28!182;CL:0000738!7.58e-28!140;CL:0002032!1.32e-25!165;CL:0000837!1.32e-25!165;CL:0002031!6.54e-25!124;CL:0002087!1.33e-24!119;CL:0000542!1.74e-21!53;CL:0000051!1.74e-21!53;CL:0000838!2.66e-21!52;CL:0000791!3.52e-11!18;CL:0000789!3.52e-11!18;CL:0002420!3.52e-11!18;CL:0002419!3.52e-11!18;CL:0000790!3.52e-11!18;CL:0000084!9.23e-11!25;CL:0000827!9.23e-11!25;CL:0000945!2.16e-10!24;CL:0000826!2.16e-10!24;CL:0000763!2.60e-08!112;CL:0000049!2.60e-08!112;CL:0000236!3.60e-08!14;CL:0000625!9.36e-08!11;CL:0000557!2.04e-07!71;CL:0000839!8.73e-07!70 | |ontology_enrichment_celltype=CL:0000037!1.35e-28!172;CL:0000566!1.35e-28!172;CL:0000988!7.42e-28!182;CL:0000738!7.58e-28!140;CL:0002032!1.32e-25!165;CL:0000837!1.32e-25!165;CL:0002031!6.54e-25!124;CL:0002087!1.33e-24!119;CL:0000542!1.74e-21!53;CL:0000051!1.74e-21!53;CL:0000838!2.66e-21!52;CL:0000791!3.52e-11!18;CL:0000789!3.52e-11!18;CL:0002420!3.52e-11!18;CL:0002419!3.52e-11!18;CL:0000790!3.52e-11!18;CL:0000084!9.23e-11!25;CL:0000827!9.23e-11!25;CL:0000945!2.16e-10!24;CL:0000826!2.16e-10!24;CL:0000763!2.60e-08!112;CL:0000049!2.60e-08!112;CL:0000236!3.60e-08!14;CL:0000625!9.36e-08!11;CL:0000557!2.04e-07!71;CL:0000839!8.73e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.49e-13;53!CL:0000791;2.33e-12;18!CL:0000789;2.33e-12;18!CL:0002419;2.33e-12;18!CL:0000945;2.41e-11;24!CL:0000084;3.17e-11;25!CL:0002087;1.08e-09;104!CL:0000236;5.29e-09;13!CL:0000625;1.48e-08;11!CL:0000738;7.16e-07;136 | |ontology_enrichment_celltype_v019=CL:0000542;1.49e-13;53!CL:0000791;2.33e-12;18!CL:0000789;2.33e-12;18!CL:0002419;2.33e-12;18!CL:0000945;2.41e-11;24!CL:0000084;3.17e-11;25!CL:0002087;1.08e-09;104!CL:0000236;5.29e-09;13!CL:0000625;1.48e-08;11!CL:0000738;7.16e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.40e-33,136;CL:0000988,4.36e-32,177;CL:0000037,5.14e-32,168;CL:0002087,3.36e-29,115;CL:0002031,3.95e-29,120;CL:0002032,1.23e-28,161;CL:0000837,1.23e-28,161;CL:0000542,2.53e-23,53;CL:0000051,2.53e-23,53;CL:0000838,4.09e-23,52;CL:0000791,2.25e-12,18;CL:0000789,2.25e-12,18;CL:0002420,2.25e-12,18;CL:0002419,2.25e-12,18;CL:0000790,2.25e-12,18;CL:0000945,1.72e-11,24;CL:0000826,1.72e-11,24;CL:0000084,2.80e-11,25;CL:0000827,2.80e-11,25;CL:0000557,1.74e-09,67;CL:0000763,2.31e-09,108;CL:0000049,2.31e-09,108;CL:0000236,5.40e-09,14;CL:0000625,1.58e-08,11;CL:0000766,1.82e-08,72;CL:0000839,1.88e-08,66;CL:0002009,9.79e-08,61;CL:0002194,2.31e-07,59;CL:0000576,2.31e-07,59;CL:0000040,2.31e-07,59;CL:0000559,2.31e-07,59;CL:0000860,5.60e-07,42;CL:0002057,5.60e-07,42;CL:0000473,7.61e-07,48;CL:0000234,7.61e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000051;1.49e-13;53!CL:0000790;2.33e-12;18 | |ontology_enrichment_development_v019=CL:0000051;1.49e-13;53!CL:0000790;2.33e-12;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.77e-18!115;UBERON:0001049!2.79e-17!57;UBERON:0005068!2.79e-17!57;UBERON:0006241!2.79e-17!57;UBERON:0007135!2.79e-17!57;UBERON:0000073!1.24e-14!94;UBERON:0001016!1.24e-14!94;UBERON:0002780!1.92e-14!41;UBERON:0001890!1.92e-14!41;UBERON:0006240!1.92e-14!41;UBERON:0005743!3.90e-14!86;UBERON:0001017!4.80e-14!82;UBERON:0003080!5.36e-14!42;UBERON:0002616!1.08e-13!59;UBERON:0000955!3.56e-12!69;UBERON:0006238!3.56e-12!69;UBERON:0002020!3.27e-11!34;UBERON:0003528!3.27e-11!34;UBERON:0001893!4.15e-11!34;UBERON:0002390!8.08e-11!102;UBERON:0003061!8.08e-11!102;UBERON:0002791!8.31e-11!33;UBERON:0002346!9.45e-11!90;UBERON:0001869!4.02e-10!32;UBERON:0003075!1.05e-09!86;UBERON:0007284!1.05e-09!86;UBERON:0002193!2.22e-09!112;UBERON:0003056!4.88e-08!61;UBERON:0002619!7.87e-08!22;UBERON:0000956!1.85e-07!25;UBERON:0000203!1.85e-07!25;UBERON:0001950!4.11e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!5.77e-18!115;UBERON:0001049!2.79e-17!57;UBERON:0005068!2.79e-17!57;UBERON:0006241!2.79e-17!57;UBERON:0007135!2.79e-17!57;UBERON:0000073!1.24e-14!94;UBERON:0001016!1.24e-14!94;UBERON:0002780!1.92e-14!41;UBERON:0001890!1.92e-14!41;UBERON:0006240!1.92e-14!41;UBERON:0005743!3.90e-14!86;UBERON:0001017!4.80e-14!82;UBERON:0003080!5.36e-14!42;UBERON:0002616!1.08e-13!59;UBERON:0000955!3.56e-12!69;UBERON:0006238!3.56e-12!69;UBERON:0002020!3.27e-11!34;UBERON:0003528!3.27e-11!34;UBERON:0001893!4.15e-11!34;UBERON:0002390!8.08e-11!102;UBERON:0003061!8.08e-11!102;UBERON:0002791!8.31e-11!33;UBERON:0002346!9.45e-11!90;UBERON:0001869!4.02e-10!32;UBERON:0003075!1.05e-09!86;UBERON:0007284!1.05e-09!86;UBERON:0002193!2.22e-09!112;UBERON:0003056!4.88e-08!61;UBERON:0002619!7.87e-08!22;UBERON:0000956!1.85e-07!25;UBERON:0000203!1.85e-07!25;UBERON:0001950!4.11e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.24e-12;41!UBERON:0001890;5.24e-12;41!UBERON:0001893;9.29e-11;34!UBERON:0003528;9.46e-11;34!UBERON:0002020;9.46e-11;34!UBERON:0000073;1.09e-10;53!UBERON:0002616;1.09e-10;53!UBERON:0002791;1.98e-10;32!UBERON:0001869;2.31e-10;32!UBERON:0002619;1.03e-08;22!UBERON:0000956;2.48e-08;25!UBERON:0000203;2.48e-08;25!UBERON:0001950;7.48e-08;20 | |ontology_enrichment_uberon_v019=UBERON:0002780;5.24e-12;41!UBERON:0001890;5.24e-12;41!UBERON:0001893;9.29e-11;34!UBERON:0003528;9.46e-11;34!UBERON:0002020;9.46e-11;34!UBERON:0000073;1.09e-10;53!UBERON:0002616;1.09e-10;53!UBERON:0002791;1.98e-10;32!UBERON:0001869;2.31e-10;32!UBERON:0002619;1.03e-08;22!UBERON:0000956;2.48e-08;25!UBERON:0000203;2.48e-08;25!UBERON:0001950;7.48e-08;20 | ||
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| ||
|short_description=p1@SLC9B1 | |short_description=p1@SLC9B1 | ||
}} | }} |
Revision as of 18:17, 17 November 2012
Short description: | p1@SLC9B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLC9B1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000394789, ENST00000452285, ENST00000503584, ENST00000504216, ENST00000510559, ENST00000514972, uc003hwu.2, uc003hwv.2, uc003hww.2, uc010ilm.2, uc011cev.1_5end |
EntrezGene: | SLC9B1 |
HGNC: | 24244 |
UniProt: | E7EVG3D6RA80D6RGI9D6RFK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.85e-19 | 56 |
neural rod | 1.85e-19 | 56 |
future spinal cord | 1.85e-19 | 56 |
neural keel | 1.85e-19 | 56 |
adult organism | 5.25e-18 | 114 |
regional part of nervous system | 7.41e-18 | 53 |
regional part of brain | 7.41e-18 | 53 |
regional part of forebrain | 4.29e-16 | 41 |
forebrain | 4.29e-16 | 41 |
anterior neural tube | 4.29e-16 | 41 |
future forebrain | 4.29e-16 | 41 |
nervous system | 1.25e-15 | 89 |
central nervous system | 3.13e-15 | 81 |
hematopoietic system | 2.38e-13 | 98 |
blood island | 2.38e-13 | 98 |
neurectoderm | 2.54e-13 | 86 |
brain | 3.92e-13 | 68 |
future brain | 3.92e-13 | 68 |
brain grey matter | 1.86e-12 | 34 |
gray matter | 1.86e-12 | 34 |
telencephalon | 2.43e-12 | 34 |
neural plate | 4.41e-12 | 82 |
presumptive neural plate | 4.41e-12 | 82 |
regional part of telencephalon | 2.06e-11 | 32 |
hemolymphoid system | 3.08e-11 | 108 |
cerebral hemisphere | 3.12e-11 | 32 |
pre-chordal neural plate | 3.15e-09 | 61 |
regional part of cerebral cortex | 1.30e-08 | 22 |
ecto-epithelium | 3.00e-08 | 104 |
cerebral cortex | 3.08e-08 | 25 |
pallium | 3.08e-08 | 25 |
neocortex | 8.33e-08 | 20 |
bone marrow | 8.35e-08 | 76 |
immune system | 1.74e-07 | 93 |
bone element | 4.82e-07 | 82 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.