Personal tools

FFCP PHASE1:Mm9::chrX:131745304..131745328,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chrX:131745304..131745328,-
|id=chrX:131745304..131745328,-
|ontology_enrichment_celltype=CL:0000117!2.51e-15!23;CL:0000337!2.51e-15!23;CL:0000540!2.73e-09!33;CL:0000047!2.73e-09!33;CL:0000031!2.73e-09!33;CL:0000404!2.73e-09!33;CL:0000393!3.22e-07!39;CL:0000211!3.22e-07!39
|ontology_enrichment_celltype=CL:0000117!2.51e-15!23;CL:0000337!2.51e-15!23;CL:0000540!2.73e-09!33;CL:0000047!2.73e-09!33;CL:0000031!2.73e-09!33;CL:0000404!2.73e-09!33;CL:0000393!3.22e-07!39;CL:0000211!3.22e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-17,23;CL:0000337,1.52e-17,23;CL:0000540,3.77e-11,33;CL:0000047,3.77e-11,33;CL:0000031,3.77e-11,33;CL:0000404,3.77e-11,33;CL:0000393,6.61e-09,39;CL:0000211,6.61e-09,39;CL:0002319,9.12e-08,43;CL:0000221,1.63e-07,44;CL:0000133,1.63e-07,44;CL:0002610,3.24e-07,3;CL:0002614,3.57e-07,3;CL:0002612,7.01e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.84e-23!52;UBERON:0005068!2.84e-23!52;UBERON:0006241!2.84e-23!52;UBERON:0007135!2.84e-23!52;UBERON:0000033!7.02e-22!63;UBERON:0000955!1.38e-21!50;UBERON:0006238!1.38e-21!50;UBERON:0002616!8.76e-21!49;UBERON:0001017!2.92e-20!73;UBERON:0005743!2.92e-20!73;UBERON:0002020!6.15e-20!34;UBERON:0000073!4.12e-19!75;UBERON:0001016!4.12e-19!75;UBERON:0002346!2.05e-18!71;UBERON:0003075!2.05e-18!71;UBERON:0007284!2.05e-18!71;UBERON:0003056!1.23e-17!49;UBERON:0003080!8.13e-17!40;UBERON:0002780!4.85e-16!39;UBERON:0001890!4.85e-16!39;UBERON:0006240!4.85e-16!39;UBERON:0002791!4.88e-16!29;UBERON:0003528!4.88e-16!29;UBERON:0001893!4.88e-16!29;UBERON:0004121!1.10e-14!102;UBERON:0000924!1.10e-14!102;UBERON:0006601!1.10e-14!102;UBERON:0007811!4.86e-11!86;UBERON:0000956!6.92e-11!21;UBERON:0001869!6.92e-11!21;UBERON:0000203!6.92e-11!21;UBERON:0000153!4.27e-10!94;UBERON:0004111!4.63e-09!122;UBERON:0000025!4.84e-09!114;UBERON:0002619!8.64e-09!17;UBERON:0003076!4.01e-07!12;UBERON:0003057!4.01e-07!12
|ontology_enrichment_uberon=UBERON:0001049!2.84e-23!52;UBERON:0005068!2.84e-23!52;UBERON:0006241!2.84e-23!52;UBERON:0007135!2.84e-23!52;UBERON:0000033!7.02e-22!63;UBERON:0000955!1.38e-21!50;UBERON:0006238!1.38e-21!50;UBERON:0002616!8.76e-21!49;UBERON:0001017!2.92e-20!73;UBERON:0005743!2.92e-20!73;UBERON:0002020!6.15e-20!34;UBERON:0000073!4.12e-19!75;UBERON:0001016!4.12e-19!75;UBERON:0002346!2.05e-18!71;UBERON:0003075!2.05e-18!71;UBERON:0007284!2.05e-18!71;UBERON:0003056!1.23e-17!49;UBERON:0003080!8.13e-17!40;UBERON:0002780!4.85e-16!39;UBERON:0001890!4.85e-16!39;UBERON:0006240!4.85e-16!39;UBERON:0002791!4.88e-16!29;UBERON:0003528!4.88e-16!29;UBERON:0001893!4.88e-16!29;UBERON:0004121!1.10e-14!102;UBERON:0000924!1.10e-14!102;UBERON:0006601!1.10e-14!102;UBERON:0007811!4.86e-11!86;UBERON:0000956!6.92e-11!21;UBERON:0001869!6.92e-11!21;UBERON:0000203!6.92e-11!21;UBERON:0000153!4.27e-10!94;UBERON:0004111!4.63e-09!122;UBERON:0000025!4.84e-09!114;UBERON:0002619!8.64e-09!17;UBERON:0003076!4.01e-07!12;UBERON:0003057!4.01e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.94e-33,54;UBERON:0001017,4.09e-30,73;UBERON:0001049,5.57e-30,52;UBERON:0005068,5.57e-30,52;UBERON:0006241,5.57e-30,52;UBERON:0007135,5.57e-30,52;UBERON:0001016,4.27e-29,75;UBERON:0002346,9.82e-25,64;UBERON:0003075,9.82e-25,64;UBERON:0007284,9.82e-25,64;UBERON:0004121,1.09e-22,95;UBERON:0000924,1.09e-22,95;UBERON:0006601,1.09e-22,95;UBERON:0000955,6.87e-22,47;UBERON:0006238,6.87e-22,47;UBERON:0002020,2.53e-21,34;UBERON:0010371,8.80e-21,73;UBERON:0002616,2.28e-20,46;UBERON:0003076,1.15e-17,12;UBERON:0003057,1.15e-17,12;UBERON:0003080,2.09e-15,40;UBERON:0010314,5.52e-15,92;UBERON:0002780,5.08e-14,39;UBERON:0001890,5.08e-14,39;UBERON:0006240,5.08e-14,39;UBERON:0003528,1.04e-13,29;UBERON:0002791,1.04e-13,29;UBERON:0001893,1.04e-13,29;UBERON:0002240,2.95e-13,6;UBERON:0005174,2.95e-13,6;UBERON:0001137,2.95e-13,6;UBERON:0003056,4.66e-13,49;UBERON:0001948,5.21e-11,5;UBERON:0002315,5.21e-11,5;UBERON:0000025,9.74e-11,114;UBERON:0004111,1.45e-09,122;UBERON:0002420,3.22e-09,8;UBERON:0007245,3.22e-09,8;UBERON:0010009,3.22e-09,8;UBERON:0010011,3.22e-09,8;UBERON:0000454,3.22e-09,8;UBERON:0002950,3.63e-09,4;UBERON:0001891,3.63e-09,4;UBERON:0009616,3.63e-09,4;UBERON:0010286,3.63e-09,4;UBERON:0004684,3.24e-07,3;UBERON:0002275,3.24e-07,3;UBERON:0002619,3.53e-07,17;UBERON:0002038,3.57e-07,3;UBERON:0009663,3.57e-07,3;UBERON:0009661,3.57e-07,3;UBERON:0000125,3.57e-07,3;UBERON:0002308,3.57e-07,3;UBERON:0000956,5.09e-07,21;UBERON:0001869,5.09e-07,21;UBERON:0000203,5.09e-07,21;UBERON:0002257,7.01e-07,3
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.841299845405528,2.85650984403804,3.3130281142742,0.857435594504678,0.287536413054709,1.83843757322004,2.20231761998777,1.65993539510744,3.22573719838111,0.395658863190582,0.640413505216868,1.56274011167028,5.02529398202486,1.12552522006336,2.44477196442896,2.35702868378934,2.13557521198654,1.4911955666024,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,1.44599356919912,0,0.161766849947409,0,0,0,3.80615036115011,2.09446706813455,0,0,0,0,2.84602214869163,3.20250421973039,1.50785222535437,2.25971616249959,2.55715457330331,3.1168206683934,1.62241263067758,0.407357455401265,0.248813941220186,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0,0.272145996605311,0.12811372028485,0.281105173679186,1.03481348295606,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.308534225774757,0,0,0,0,0.656669856316381,0.162137619091711,0,0,0.134206418760372,6.9395683026162,1.9551876352064,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0,0,0,0.398282546508734,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.97706828962155,3.8679856575427,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,2.57057053137446,0.283880170416537,0.534196811001766,0.81443479676788,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0.119372344003136,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0.26175594198403,0,0,0,0.747582730219894,1.48912641411388,0.583353565032143,0.258319646955462,0.337912250981556,0,0.39061315453185,0.419437377702843,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0.428736758158132,0,0.564751842617067,0.460325236507177,3.43737308063638,2.40594455281163,2.74033007908257,0.755393897389701,1.35004500046361,3.15224842256954,0,0.51776031175182,0.31136204275253,0,0.341467211508268,0.243106717068294,0.209613162627982,0.551530525350042,0,0.206035057238894,0.320919209591815,0,1.01391719956096,0,0.561849044819294,0.384150914429216,0.574354689556133,1.42888107384922,0.463537303779422,0.578727661391115,0,0,1.02860775715625,0.532427418478012,1.1921809497366,0.145346416632329,0.470546902076653,0.338458431566706,0.548783918618318,0.263069711437843,0.271608227691724,0,0.593175090620871,0.591026894253381,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0.644613162144895,0.382576664137687,0.661774257358546,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.841299845405528,2.85650984403804,3.3130281142742,0.857435594504678,0.287536413054709,1.83843757322004,2.20231761998777,1.65993539510744,3.22573719838111,0.395658863190582,0.640413505216868,1.56274011167028,5.02529398202486,1.12552522006336,2.44477196442896,2.35702868378934,2.13557521198654,1.4911955666024,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,1.44599356919912,0,0.161766849947409,0,0,0,3.80615036115011,2.09446706813455,0,0,0,0,2.84602214869163,3.20250421973039,1.50785222535437,2.25971616249959,2.55715457330331,3.1168206683934,1.62241263067758,0.407357455401265,0.248813941220186,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0,0.272145996605311,0.12811372028485,0.281105173679186,1.03481348295606,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.308534225774757,0,0,0,0,0.656669856316381,0.162137619091711,0,0,0.134206418760372,6.9395683026162,1.9551876352064,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0,0,0,0.398282546508734,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.97706828962155,3.8679856575427,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,2.57057053137446,0.283880170416537,0.534196811001766,0.81443479676788,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0.119372344003136,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0.26175594198403,0,0,0,0.747582730219894,1.48912641411388,0.583353565032143,0.258319646955462,0.337912250981556,0,0.39061315453185,0.419437377702843,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0.428736758158132,0,0.564751842617067,0.460325236507177,3.43737308063638,2.40594455281163,2.74033007908257,0.755393897389701,1.35004500046361,3.15224842256954,0,0.51776031175182,0.31136204275253,0,0.341467211508268,0.243106717068294,0.209613162627982,0.551530525350042,0,0.206035057238894,0.320919209591815,0,1.01391719956096,0,0.561849044819294,0.384150914429216,0.574354689556133,1.42888107384922,0.463537303779422,0.578727661391115,0,0,1.02860775715625,0.532427418478012,1.1921809497366,0.145346416632329,0.470546902076653,0.338458431566706,0.548783918618318,0.263069711437843,0.271608227691724,0,0.593175090620871,0.591026894253381,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0.644613162144895,0.382576664137687,0.661774257358546,0
|short_description=p4@Tceal6
|short_description=p4@Tceal6
}}
}}

Revision as of 00:04, 14 November 2012

Short description:p4@Tceal6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Tceal6_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -78bp_to_ENSMUST00000033783, NM_025355, uc009uhc.2_5end
EntrezGene:Tceal6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Tceal6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.98
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.94e-3354
central nervous system4.09e-3073
neural tube5.57e-3052
neural rod5.57e-3052
future spinal cord5.57e-3052
neural keel5.57e-3052
nervous system4.27e-2975
neurectoderm9.82e-2564
neural plate9.82e-2564
presumptive neural plate9.82e-2564
ectoderm-derived structure1.09e-2295
ectoderm1.09e-2295
presumptive ectoderm1.09e-2295
brain6.87e-2247
future brain6.87e-2247
gray matter2.53e-2134
ecto-epithelium8.80e-2173
regional part of brain2.28e-2046
posterior neural tube1.15e-1712
chordal neural plate1.15e-1712
anterior neural tube2.09e-1540
structure with developmental contribution from neural crest5.52e-1592
regional part of forebrain5.08e-1439
forebrain5.08e-1439
future forebrain5.08e-1439
brain grey matter1.04e-1329
regional part of telencephalon1.04e-1329
telencephalon1.04e-1329
spinal cord2.95e-136
dorsal region element2.95e-136
dorsum2.95e-136
pre-chordal neural plate4.66e-1349
regional part of spinal cord5.21e-115
gray matter of spinal cord5.21e-115
tube9.74e-11114
anatomical conduit1.45e-09122
basal ganglion3.22e-098
nuclear complex of neuraxis3.22e-098
aggregate regional part of brain3.22e-098
collection of basal ganglia3.22e-098
cerebral subcortex3.22e-098
regional part of midbrain3.63e-094
midbrain3.63e-094
presumptive midbrain3.63e-094
midbrain neural tube3.63e-094
raphe nuclei3.24e-073
reticular formation3.24e-073
regional part of cerebral cortex3.53e-0717
substantia nigra3.57e-073
telencephalic nucleus3.57e-073
midbrain nucleus3.57e-073
neural nucleus3.57e-073
nucleus of brain3.57e-073
cerebral cortex5.09e-0721
cerebral hemisphere5.09e-0721
pallium5.09e-0721
ventral horn of spinal cord7.01e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:131745304..131745328,-&oldid=2286102"