FFCP PHASE1:Mm9::chr16:28447103..28447119,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=93|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:28447103..28447119,-|id=chr16:28447103..28447119,-|ontology_enrichment_celltype=CL:0000117!2.55e-09!23;CL:0000337!2.55e-09!23|ontology_enrichment_celltype_v019_2=CL:0002612,2.67e-08,3;CL:0002614,9.25e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.93e-18!63;UBERON:0003056!3.13e-17!49;UBERON:0002346!2.84e-16!71;UBERON:0003075!2.84e-16!71;UBERON:0007284!2.84e-16!71;UBERON:0001049!8.94e-16!52;UBERON:0005068!8.94e-16!52;UBERON:0006241!8.94e-16!52;UBERON:0007135!8.94e-16!52;UBERON:0001017!4.59e-15!73;UBERON:0005743!4.59e-15!73;UBERON:0000955!2.35e-14!50;UBERON:0006238!2.35e-14!50;UBERON:0000073!3.95e-14!75;UBERON:0001016!3.95e-14!75;UBERON:0004121!5.85e-14!102;UBERON:0000924!5.85e-14!102;UBERON:0006601!5.85e-14!102;UBERON:0002616!1.37e-13!49;UBERON:0002020!4.12e-13!34;UBERON:0003080!2.38e-12!40;UBERON:0000153!4.94e-12!94;UBERON:0002780!8.38e-12!39;UBERON:0001890!8.38e-12!39;UBERON:0006240!8.38e-12!39;UBERON:0002791!3.21e-11!29;UBERON:0003528!3.21e-11!29;UBERON:0001893!3.21e-11!29;UBERON:0007811!3.16e-10!86;UBERON:0000475!1.46e-07!200;UBERON:0002420!8.07e-07!8;UBERON:0007245!8.07e-07!8;UBERON:0010009!8.07e-07!8;UBERON:0010011!8.07e-07!8;UBERON:0000454!8.07e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.25e-24,64;UBERON:0003075,6.25e-24,64;UBERON:0007284,6.25e-24,64;UBERON:0010371,3.06e-20,73;UBERON:0003056,5.48e-19,49;UBERON:0001049,5.83e-19,52;UBERON:0005068,5.83e-19,52;UBERON:0006241,5.83e-19,52;UBERON:0007135,5.83e-19,52;UBERON:0002020,6.09e-18,34;UBERON:0004121,4.44e-17,95;UBERON:0000924,4.44e-17,95;UBERON:0006601,4.44e-17,95;UBERON:0000073,2.98e-16,54;UBERON:0000955,1.37e-15,47;UBERON:0006238,1.37e-15,47;UBERON:0001017,5.03e-15,73;UBERON:0010314,8.07e-15,92;UBERON:0001016,1.77e-14,75;UBERON:0003528,3.09e-14,29;UBERON:0002791,3.09e-14,29;UBERON:0001893,3.09e-14,29;UBERON:0002616,5.13e-14,46;UBERON:0002780,1.87e-13,39;UBERON:0001890,1.87e-13,39;UBERON:0006240,1.87e-13,39;UBERON:0003080,5.01e-13,40;UBERON:0002021,3.56e-12,10;UBERON:0000411,3.56e-12,10;UBERON:0001950,3.56e-12,10;UBERON:0002420,9.61e-11,8;UBERON:0007245,9.61e-11,8;UBERON:0010009,9.61e-11,8;UBERON:0010011,9.61e-11,8;UBERON:0000454,9.61e-11,8;UBERON:0002619,1.56e-08,17;UBERON:0002257,2.67e-08,3;UBERON:0002038,9.25e-08,3;UBERON:0009663,9.25e-08,3;UBERON:0009661,9.25e-08,3;UBERON:0000125,9.25e-08,3;UBERON:0002308,9.25e-08,3;UBERON:0000970,2.01e-07,9;UBERON:0000019,2.01e-07,9;UBERON:0000047,2.01e-07,9;UBERON:0010312,2.01e-07,9;UBERON:0004088,2.01e-07,9;UBERON:0002104,2.01e-07,9;UBERON:0001456,2.01e-07,9;UBERON:0003072,2.01e-07,9;UBERON:0004128,2.01e-07,9;UBERON:0003071,2.01e-07,9;UBERON:0002240,5.91e-07,6;UBERON:0005174,5.91e-07,6;UBERON:0001137,5.91e-07,6;UBERON:0003076,6.93e-07,12;UBERON:0003057,6.93e-07,12;UBERON:0000025,8.77e-07,114|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,0.135005938331691,0.420649922702764,0,0.662605622854841,0.367472397644862,0.766763768145891,0,0,0.638436690425939,0.921639199537461,0.923204014111357,1.18933936683133,0.52091337055676,1.67509799400829,1.12552522006336,1.06958773443767,2.35702868378934,1.13897344639282,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.485300549842228,0,0,0,0,1.25668024088073,0,0,0,0,0.898743836428936,1.83000241127451,1.63350657746724,0.869121600961382,1.02286182932132,2.0778804455956,3.40706652442291,0.407357455401265,0.497627882440372,0.758168275301024,0.210441855886474,0.260240885925407,0.229902104433473,0.720248519221397,1.80845781402858,2.24520447199382,1.66547836370305,1.40552586839593,3.3631438196072,0,0.945530400839096,1.05570674498369,1.53437012699302,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0,0.246794327843601,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0.315270288212382,0.44292937929755,0.797273843287435,0,0,0,0,0,0,0,1.12385412991454,0.937693492737625,0,0,0,0,0,0,0,0,0,0.292255857911312,0,26.9909905794318,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0.922305443831782,0,0.363533729477506,0,0.316036757935816,0,0,0,0.540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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=93 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:28447103..28447119,- | |||
|id=chr16:28447103..28447119,- | |||
|ontology_enrichment_celltype=CL:0000117!2.55e-09!23;CL:0000337!2.55e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.67e-08,3;CL:0002614,9.25e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.93e-18!63;UBERON:0003056!3.13e-17!49;UBERON:0002346!2.84e-16!71;UBERON:0003075!2.84e-16!71;UBERON:0007284!2.84e-16!71;UBERON:0001049!8.94e-16!52;UBERON:0005068!8.94e-16!52;UBERON:0006241!8.94e-16!52;UBERON:0007135!8.94e-16!52;UBERON:0001017!4.59e-15!73;UBERON:0005743!4.59e-15!73;UBERON:0000955!2.35e-14!50;UBERON:0006238!2.35e-14!50;UBERON:0000073!3.95e-14!75;UBERON:0001016!3.95e-14!75;UBERON:0004121!5.85e-14!102;UBERON:0000924!5.85e-14!102;UBERON:0006601!5.85e-14!102;UBERON:0002616!1.37e-13!49;UBERON:0002020!4.12e-13!34;UBERON:0003080!2.38e-12!40;UBERON:0000153!4.94e-12!94;UBERON:0002780!8.38e-12!39;UBERON:0001890!8.38e-12!39;UBERON:0006240!8.38e-12!39;UBERON:0002791!3.21e-11!29;UBERON:0003528!3.21e-11!29;UBERON:0001893!3.21e-11!29;UBERON:0007811!3.16e-10!86;UBERON:0000475!1.46e-07!200;UBERON:0002420!8.07e-07!8;UBERON:0007245!8.07e-07!8;UBERON:0010009!8.07e-07!8;UBERON:0010011!8.07e-07!8;UBERON:0000454!8.07e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.25e-24,64;UBERON:0003075,6.25e-24,64;UBERON:0007284,6.25e-24,64;UBERON:0010371,3.06e-20,73;UBERON:0003056,5.48e-19,49;UBERON:0001049,5.83e-19,52;UBERON:0005068,5.83e-19,52;UBERON:0006241,5.83e-19,52;UBERON:0007135,5.83e-19,52;UBERON:0002020,6.09e-18,34;UBERON:0004121,4.44e-17,95;UBERON:0000924,4.44e-17,95;UBERON:0006601,4.44e-17,95;UBERON:0000073,2.98e-16,54;UBERON:0000955,1.37e-15,47;UBERON:0006238,1.37e-15,47;UBERON:0001017,5.03e-15,73;UBERON:0010314,8.07e-15,92;UBERON:0001016,1.77e-14,75;UBERON:0003528,3.09e-14,29;UBERON:0002791,3.09e-14,29;UBERON:0001893,3.09e-14,29;UBERON:0002616,5.13e-14,46;UBERON:0002780,1.87e-13,39;UBERON:0001890,1.87e-13,39;UBERON:0006240,1.87e-13,39;UBERON:0003080,5.01e-13,40;UBERON:0002021,3.56e-12,10;UBERON:0000411,3.56e-12,10;UBERON:0001950,3.56e-12,10;UBERON:0002420,9.61e-11,8;UBERON:0007245,9.61e-11,8;UBERON:0010009,9.61e-11,8;UBERON:0010011,9.61e-11,8;UBERON:0000454,9.61e-11,8;UBERON:0002619,1.56e-08,17;UBERON:0002257,2.67e-08,3;UBERON:0002038,9.25e-08,3;UBERON:0009663,9.25e-08,3;UBERON:0009661,9.25e-08,3;UBERON:0000125,9.25e-08,3;UBERON:0002308,9.25e-08,3;UBERON:0000970,2.01e-07,9;UBERON:0000019,2.01e-07,9;UBERON:0000047,2.01e-07,9;UBERON:0010312,2.01e-07,9;UBERON:0004088,2.01e-07,9;UBERON:0002104,2.01e-07,9;UBERON:0001456,2.01e-07,9;UBERON:0003072,2.01e-07,9;UBERON:0004128,2.01e-07,9;UBERON:0003071,2.01e-07,9;UBERON:0002240,5.91e-07,6;UBERON:0005174,5.91e-07,6;UBERON:0001137,5.91e-07,6;UBERON:0003076,6.93e-07,12;UBERON:0003057,6.93e-07,12;UBERON:0000025,8.77e-07,114 | |||
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|short_description=p@chr16:28447103..28447119,- | |||
}} |
Revision as of 12:21, 13 September 2013
Short description: | p@chr16:28447103..28447119, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:28447103..28447119, - |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.67e-08 | 3 |
neuron of the substantia nigra | 9.25e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.