FFCP PHASE1:Mm9::chr16:67619032..67619036,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1995|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:67619032..67619036,-|id=chr16:67619032..67619036,-|ontology_enrichment_celltype=CL:0000117!4.19e-22!23;CL:0000337!4.19e-22!23;CL:0000540!3.24e-15!33;CL:0000047!3.24e-15!33;CL:0000031!3.24e-15!33;CL:0000404!3.24e-15!33;CL:0000393!3.17e-14!39;CL:0000211!3.17e-14!39;CL:0002319!3.37e-13!43;CL:0000221!1.15e-12!44;CL:0000133!1.15e-12!44;CL:0000055!2.96e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.92e-37,23;CL:0000337,9.92e-37,23;CL:0000540,3.04e-24,33;CL:0000047,3.04e-24,33;CL:0000031,3.04e-24,33;CL:0000404,3.04e-24,33;CL:0000393,7.94e-20,39;CL:0000211,7.94e-20,39;CL:0002319,1.44e-17,43;CL:0000221,4.55e-17,44;CL:0000133,4.55e-17,44;CL:0002321,4.11e-09,70;CL:0002612,1.18e-08,3;CL:0002610,1.33e-08,3;CL:0002614,1.89e-08,3;CL:0002613,2.52e-08,3;CL:0002609,2.41e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.13e-28!75;UBERON:0001016!2.13e-28!75;UBERON:0000033!4.93e-28!63;UBERON:0001017!2.36e-27!73;UBERON:0005743!2.36e-27!73;UBERON:0001049!1.00e-26!52;UBERON:0005068!1.00e-26!52;UBERON:0006241!1.00e-26!52;UBERON:0007135!1.00e-26!52;UBERON:0002346!2.31e-26!71;UBERON:0003075!2.31e-26!71;UBERON:0007284!2.31e-26!71;UBERON:0000955!7.69e-26!50;UBERON:0006238!7.69e-26!50;UBERON:0004121!3.33e-25!102;UBERON:0000924!3.33e-25!102;UBERON:0006601!3.33e-25!102;UBERON:0002020!4.14e-25!34;UBERON:0002616!9.39e-25!49;UBERON:0003056!3.40e-24!49;UBERON:0002791!1.57e-20!29;UBERON:0003528!1.57e-20!29;UBERON:0001893!1.57e-20!29;UBERON:0003080!3.45e-19!40;UBERON:0002780!1.98e-18!39;UBERON:0001890!1.98e-18!39;UBERON:0006240!1.98e-18!39;UBERON:0007811!7.33e-16!86;UBERON:0000956!3.54e-13!21;UBERON:0001869!3.54e-13!21;UBERON:0000203!3.54e-13!21;UBERON:0000153!4.07e-13!94;UBERON:0002021!9.80e-10!10;UBERON:0000411!9.80e-10!10;UBERON:0001950!9.80e-10!10;UBERON:0002619!1.11e-09!17;UBERON:0002420!9.48e-09!8;UBERON:0007245!9.48e-09!8;UBERON:0010009!9.48e-09!8;UBERON:0010011!9.48e-09!8;UBERON:0000454!9.48e-09!8;UBERON:0003076!4.63e-08!12;UBERON:0003057!4.63e-08!12;UBERON:0000025!4.43e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.81e-38,34;UBERON:0000073,3.66e-31,54;UBERON:0003528,1.85e-30,29;UBERON:0002791,1.85e-30,29;UBERON:0001893,1.85e-30,29;UBERON:0001017,1.98e-27,73;UBERON:0001016,1.58e-26,75;UBERON:0002346,3.02e-25,64;UBERON:0003075,3.02e-25,64;UBERON:0007284,3.02e-25,64;UBERON:0001049,5.50e-25,52;UBERON:0005068,5.50e-25,52;UBERON:0006241,5.50e-25,52;UBERON:0007135,5.50e-25,52;UBERON:0004121,9.50e-25,95;UBERON:0000924,9.50e-25,95;UBERON:0006601,9.50e-25,95;UBERON:0003056,1.71e-24,49;UBERON:0002780,8.32e-24,39;UBERON:0001890,8.32e-24,39;UBERON:0006240,8.32e-24,39;UBERON:0003080,4.33e-23,40;UBERON:0010371,2.20e-21,73;UBERON:0000955,3.04e-21,47;UBERON:0006238,3.04e-21,47;UBERON:0002616,1.89e-19,46;UBERON:0002420,5.43e-19,8;UBERON:0007245,5.43e-19,8;UBERON:0010009,5.43e-19,8;UBERON:0010011,5.43e-19,8;UBERON:0000454,5.43e-19,8;UBERON:0010314,1.05e-15,92;UBERON:0000956,5.91e-15,21;UBERON:0001869,5.91e-15,21;UBERON:0000203,5.91e-15,21;UBERON:0000369,3.85e-12,5;UBERON:0002435,3.85e-12,5;UBERON:0000204,3.85e-12,5;UBERON:0010082,3.85e-12,5;UBERON:0002257,1.18e-08,3;UBERON:0002021,1.33e-08,10;UBERON:0000411,1.33e-08,10;UBERON:0001950,1.33e-08,10;UBERON:0004684,1.33e-08,3;UBERON:0002275,1.33e-08,3;UBERON:0002038,1.89e-08,3;UBERON:0009663,1.89e-08,3;UBERON:0009661,1.89e-08,3;UBERON:0000125,1.89e-08,3;UBERON:0002308,1.89e-08,3;UBERON:0001948,2.00e-08,5;UBERON:0002315,2.00e-08,5;UBERON:0000025,2.26e-08,114;UBERON:0002619,2.32e-08,17;UBERON:0004111,1.82e-07,122;UBERON:0002240,5.10e-07,6;UBERON:0005174,5.10e-07,6;UBERON:0001137,5.10e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.8664130215526,1.89008313664367,1.47227472945967,1.14260393761521,0.441737081903227,0.857435594504678,0.383381884072945,4.5960939330501,3.30347642998166,2.042997409363,1.38245879930619,1.58263545276233,1.18933936683133,3.64639359389732,1.11673199600552,2.25105044012672,3.51435969886663,1.47314292736834,4.41352210477219,1.67759501242771,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,0.898743836428936,1.37250180845588,1.00523481690292,1.21677024134594,2.30143911597297,0.41557608911912,1.29793010454206,0,0.124406970610093,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0.30140963567143,0.612328492361951,1.5373646434182,1.40552586839593,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.703270119553219,0,0,0,0,0.861693590931196,0.238968797952552,0,0,0,0,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,2.25900737046827,0.920650473014354,0.572895513439397,1.89038500578056,1.37016503954128,1.5107877947794,0.675022500231806,1.35096360967266,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0,0.231768651889711,0.578727661391115,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0,0.423073039458382,0.365855945745545,0.526139422875686,0.271608227691724,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0.220591419119515,0|short_description=p@chr16:67619032..67619036,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1995 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:67619032..67619036,- | |||
|id=chr16:67619032..67619036,- | |||
|ontology_enrichment_celltype=CL:0000117!4.19e-22!23;CL:0000337!4.19e-22!23;CL:0000540!3.24e-15!33;CL:0000047!3.24e-15!33;CL:0000031!3.24e-15!33;CL:0000404!3.24e-15!33;CL:0000393!3.17e-14!39;CL:0000211!3.17e-14!39;CL:0002319!3.37e-13!43;CL:0000221!1.15e-12!44;CL:0000133!1.15e-12!44;CL:0000055!2.96e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.92e-37,23;CL:0000337,9.92e-37,23;CL:0000540,3.04e-24,33;CL:0000047,3.04e-24,33;CL:0000031,3.04e-24,33;CL:0000404,3.04e-24,33;CL:0000393,7.94e-20,39;CL:0000211,7.94e-20,39;CL:0002319,1.44e-17,43;CL:0000221,4.55e-17,44;CL:0000133,4.55e-17,44;CL:0002321,4.11e-09,70;CL:0002612,1.18e-08,3;CL:0002610,1.33e-08,3;CL:0002614,1.89e-08,3;CL:0002613,2.52e-08,3;CL:0002609,2.41e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.13e-28!75;UBERON:0001016!2.13e-28!75;UBERON:0000033!4.93e-28!63;UBERON:0001017!2.36e-27!73;UBERON:0005743!2.36e-27!73;UBERON:0001049!1.00e-26!52;UBERON:0005068!1.00e-26!52;UBERON:0006241!1.00e-26!52;UBERON:0007135!1.00e-26!52;UBERON:0002346!2.31e-26!71;UBERON:0003075!2.31e-26!71;UBERON:0007284!2.31e-26!71;UBERON:0000955!7.69e-26!50;UBERON:0006238!7.69e-26!50;UBERON:0004121!3.33e-25!102;UBERON:0000924!3.33e-25!102;UBERON:0006601!3.33e-25!102;UBERON:0002020!4.14e-25!34;UBERON:0002616!9.39e-25!49;UBERON:0003056!3.40e-24!49;UBERON:0002791!1.57e-20!29;UBERON:0003528!1.57e-20!29;UBERON:0001893!1.57e-20!29;UBERON:0003080!3.45e-19!40;UBERON:0002780!1.98e-18!39;UBERON:0001890!1.98e-18!39;UBERON:0006240!1.98e-18!39;UBERON:0007811!7.33e-16!86;UBERON:0000956!3.54e-13!21;UBERON:0001869!3.54e-13!21;UBERON:0000203!3.54e-13!21;UBERON:0000153!4.07e-13!94;UBERON:0002021!9.80e-10!10;UBERON:0000411!9.80e-10!10;UBERON:0001950!9.80e-10!10;UBERON:0002619!1.11e-09!17;UBERON:0002420!9.48e-09!8;UBERON:0007245!9.48e-09!8;UBERON:0010009!9.48e-09!8;UBERON:0010011!9.48e-09!8;UBERON:0000454!9.48e-09!8;UBERON:0003076!4.63e-08!12;UBERON:0003057!4.63e-08!12;UBERON:0000025!4.43e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.81e-38,34;UBERON:0000073,3.66e-31,54;UBERON:0003528,1.85e-30,29;UBERON:0002791,1.85e-30,29;UBERON:0001893,1.85e-30,29;UBERON:0001017,1.98e-27,73;UBERON:0001016,1.58e-26,75;UBERON:0002346,3.02e-25,64;UBERON:0003075,3.02e-25,64;UBERON:0007284,3.02e-25,64;UBERON:0001049,5.50e-25,52;UBERON:0005068,5.50e-25,52;UBERON:0006241,5.50e-25,52;UBERON:0007135,5.50e-25,52;UBERON:0004121,9.50e-25,95;UBERON:0000924,9.50e-25,95;UBERON:0006601,9.50e-25,95;UBERON:0003056,1.71e-24,49;UBERON:0002780,8.32e-24,39;UBERON:0001890,8.32e-24,39;UBERON:0006240,8.32e-24,39;UBERON:0003080,4.33e-23,40;UBERON:0010371,2.20e-21,73;UBERON:0000955,3.04e-21,47;UBERON:0006238,3.04e-21,47;UBERON:0002616,1.89e-19,46;UBERON:0002420,5.43e-19,8;UBERON:0007245,5.43e-19,8;UBERON:0010009,5.43e-19,8;UBERON:0010011,5.43e-19,8;UBERON:0000454,5.43e-19,8;UBERON:0010314,1.05e-15,92;UBERON:0000956,5.91e-15,21;UBERON:0001869,5.91e-15,21;UBERON:0000203,5.91e-15,21;UBERON:0000369,3.85e-12,5;UBERON:0002435,3.85e-12,5;UBERON:0000204,3.85e-12,5;UBERON:0010082,3.85e-12,5;UBERON:0002257,1.18e-08,3;UBERON:0002021,1.33e-08,10;UBERON:0000411,1.33e-08,10;UBERON:0001950,1.33e-08,10;UBERON:0004684,1.33e-08,3;UBERON:0002275,1.33e-08,3;UBERON:0002038,1.89e-08,3;UBERON:0009663,1.89e-08,3;UBERON:0009661,1.89e-08,3;UBERON:0000125,1.89e-08,3;UBERON:0002308,1.89e-08,3;UBERON:0001948,2.00e-08,5;UBERON:0002315,2.00e-08,5;UBERON:0000025,2.26e-08,114;UBERON:0002619,2.32e-08,17;UBERON:0004111,1.82e-07,122;UBERON:0002240,5.10e-07,6;UBERON:0005174,5.10e-07,6;UBERON:0001137,5.10e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.8664130215526,1.89008313664367,1.47227472945967,1.14260393761521,0.441737081903227,0.857435594504678,0.383381884072945,4.5960939330501,3.30347642998166,2.042997409363,1.38245879930619,1.58263545276233,1.18933936683133,3.64639359389732,1.11673199600552,2.25105044012672,3.51435969886663,1.47314292736834,4.41352210477219,1.67759501242771,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,0.898743836428936,1.37250180845588,1.00523481690292,1.21677024134594,2.30143911597297,0.41557608911912,1.29793010454206,0,0.124406970610093,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0.30140963567143,0.612328492361951,1.5373646434182,1.40552586839593,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.703270119553219,0,0,0,0,0.861693590931196,0.238968797952552,0,0,0,0,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,2.25900737046827,0.920650473014354,0.572895513439397,1.89038500578056,1.37016503954128,1.5107877947794,0.675022500231806,1.35096360967266,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0,0.231768651889711,0.578727661391115,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0,0.423073039458382,0.365855945745545,0.526139422875686,0.271608227691724,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p@chr16:67619032..67619036,- | |||
}} |
Revision as of 13:02, 13 September 2013
Short description: | p@chr16:67619032..67619036, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:67619032..67619036, - |
Coexpression cluster: | MCL_coexpression_mm9:1995 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.92e-37 | 23 |
neuroblast (sensu Vertebrata) | 9.92e-37 | 23 |
neuron | 3.04e-24 | 33 |
neuronal stem cell | 3.04e-24 | 33 |
neuroblast | 3.04e-24 | 33 |
electrically signaling cell | 3.04e-24 | 33 |
electrically responsive cell | 7.94e-20 | 39 |
electrically active cell | 7.94e-20 | 39 |
neural cell | 1.44e-17 | 43 |
ectodermal cell | 4.55e-17 | 44 |
neurectodermal cell | 4.55e-17 | 44 |
embryonic cell | 4.11e-09 | 70 |
neuron of the ventral spinal cord | 1.18e-08 | 3 |
raphe nuclei neuron | 1.33e-08 | 3 |
neuron of the substantia nigra | 1.89e-08 | 3 |
striatum neuron | 2.52e-08 | 3 |
neuron of cerebral cortex | 2.41e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.