FFCP PHASE1:Mm9::chr11:92959671..92959711,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72605|HGNC=|MCL_coexpression_id=1|UniProt=P61215,Q9CZQ3,Q3TRQ4|association_with_transcript=-6bp_to_ENSMUST00000042943,ENSMUST00000107859,ENSMUST00000107861_5end|description=CAGE_peak_1_at_Car10_5end|id=chr11:92959671..92959711,+|ontology_enrichment_celltype=CL:0000117!3.24e-10!23;CL:0000337!3.24e-10!23;CL:0000221!6.67e-07!44;CL:0000133!6.67e-07!44;CL:0002319!8.88e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-13,23;CL:0000337,1.45e-13,23;CL:0000540,5.03e-08,33;CL:0000047,5.03e-08,33;CL:0000031,5.03e-08,33;CL:0000404,5.03e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.80e-25!75;UBERON:0001016!8.80e-25!75;UBERON:0001017!1.58e-24!73;UBERON:0005743!1.58e-24!73;UBERON:0001049!3.04e-24!52;UBERON:0005068!3.04e-24!52;UBERON:0006241!3.04e-24!52;UBERON:0007135!3.04e-24!52;UBERON:0000033!5.04e-24!63;UBERON:0002346!5.28e-24!71;UBERON:0003075!5.28e-24!71;UBERON:0007284!5.28e-24!71;UBERON:0000955!1.38e-22!50;UBERON:0006238!1.38e-22!50;UBERON:0004121!5.92e-22!102;UBERON:0000924!5.92e-22!102;UBERON:0006601!5.92e-22!102;UBERON:0002616!7.98e-22!49;UBERON:0003056!3.85e-21!49;UBERON:0003080!1.71e-18!40;UBERON:0002780!9.04e-18!39;UBERON:0001890!9.04e-18!39;UBERON:0006240!9.04e-18!39;UBERON:0002020!1.36e-17!34;UBERON:0002791!4.33e-14!29;UBERON:0003528!4.33e-14!29;UBERON:0001893!4.33e-14!29;UBERON:0007811!6.84e-13!86;UBERON:0000153!1.16e-12!94;UBERON:0002619!4.68e-11!17;UBERON:0000956!1.18e-09!21;UBERON:0001869!1.18e-09!21;UBERON:0000203!1.18e-09!21;UBERON:0002021!2.25e-09!10;UBERON:0000411!2.25e-09!10;UBERON:0001950!2.25e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.77e-33,54;UBERON:0001049,1.39e-30,52;UBERON:0005068,1.39e-30,52;UBERON:0006241,1.39e-30,52;UBERON:0007135,1.39e-30,52;UBERON:0001017,2.61e-30,73;UBERON:0001016,3.86e-29,75;UBERON:0002346,1.53e-28,64;UBERON:0003075,1.53e-28,64;UBERON:0007284,1.53e-28,64;UBERON:0004121,6.45e-25,95;UBERON:0000924,6.45e-25,95;UBERON:0006601,6.45e-25,95;UBERON:0000955,1.47e-24,47;UBERON:0006238,1.47e-24,47;UBERON:0010371,1.76e-23,73;UBERON:0002616,2.32e-23,46;UBERON:0002020,4.28e-22,34;UBERON:0003056,4.18e-20,49;UBERON:0003080,5.61e-20,40;UBERON:0002780,7.55e-19,39;UBERON:0001890,7.55e-19,39;UBERON:0006240,7.55e-19,39;UBERON:0003528,2.48e-16,29;UBERON:0002791,2.48e-16,29;UBERON:0001893,2.48e-16,29;UBERON:0010314,4.18e-16,92;UBERON:0002021,1.35e-15,10;UBERON:0000411,1.35e-15,10;UBERON:0001950,1.35e-15,10;UBERON:0002619,2.32e-11,17;UBERON:0003076,2.68e-11,12;UBERON:0003057,2.68e-11,12;UBERON:0000956,2.85e-10,21;UBERON:0001869,2.85e-10,21;UBERON:0000203,2.85e-10,21;UBERON:0002240,7.42e-09,6;UBERON:0005174,7.42e-09,6;UBERON:0001137,7.42e-09,6;UBERON:0000025,5.41e-08,114;UBERON:0002420,1.36e-07,8;UBERON:0007245,1.36e-07,8;UBERON:0010009,1.36e-07,8;UBERON:0010011,1.36e-07,8;UBERON:0000454,1.36e-07,8;UBERON:0001948,1.43e-07,5;UBERON:0002315,1.43e-07,5;UBERON:0004111,7.85e-07,122|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0,2.87505128729943,0.167782606057736,0,0,0,0,0,3.03474691289397,4.7609188134483,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0.135005938331691,0,10.5690864229407,15.6816664075646,0.489963196859816,0.383381884072945,0.919218786610021,4.40463523997555,11.6195477657521,10.2916377281683,3.56092976871523,5.12330804173494,6.77187381723788,10.3297709630511,3.93933827022176,8.25110537994775,12.0797720044204,16.3727432918968,8.01517617048792,0.530083353332288,0.151143120213571,0,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,35.1336956413857,30.5792191947644,0,0,0,0,13.3313669070292,8.23501085073528,0.753926112677186,34.7648640384553,38.8687495142102,9.97382613885888,8.4365456795234,0,0,0,1.68353484709179,0.260240885925407,0.229902104433473,0.360124259610698,0.30140963567143,1.15662048557257,1.15302348256365,0.468508622798644,5.95017752699736,0,0,0.175951124163949,0.43839146485515,0.278047249225598,1.0447564995665,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,11.7762371195911,1.64647379806855,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,15.2523060488402,11.7211686592203,0,0,0,0.390438744296638,0.861693590931196,0,0,0,0,0,0,15.4234231882467,0,0.35613120733451,0.162886959353576,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,0,10.5536277783674,0.36012218806262,0.129358683782755,1.07168517515796,0.532020700926821,1.07021290561242,1.64549020602121,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,15.7611506708933,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0,17.5073071211291,21.6352861158373,18.3326564300607,19.4194096048367,30.8287133896789,46.0790277407717,33.7511250115903,37.3766598676103,32.6262534468627,40.385304316642,0,0.798049746802062,0.853668028770671,0.972426868273176,0.838452650511929,0.735374033800057,1.55572709461131,0.824140228955577,0.962757628775446,0.252697211763798,0.50695859978048,1.50901073108861,0.749132059759059,1.02440243847791,1.37845125493472,1.42888107384922,0.927074607558844,0.77163688185482,1.64834360321323,1.32479028120958,0.342869252385415,0.887379030796687,1.66905332963125,0.581385666529314,1.03520318456864,1.26921911837515,1.46342378298218,0.789209134313529,0.814824683075171,0.561142271657738,0.711810108745045,0.689531376628944,1.22769312950907,0.77468420592983,1.35034627686799,1.74867404556562,0.467863216890817,0.859484216193193,1.14772999241306,1.10295709559758,1.15933917810211|short_description=p1@Car10}} | ||
|EntrezGene=72605 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P61215,Q9CZQ3,Q3TRQ4 | |||
|association_with_transcript=-6bp_to_ENSMUST00000042943,ENSMUST00000107859,ENSMUST00000107861_5end | |||
|description=CAGE_peak_1_at_Car10_5end | |||
|id=chr11:92959671..92959711,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.24e-10!23;CL:0000337!3.24e-10!23;CL:0000221!6.67e-07!44;CL:0000133!6.67e-07!44;CL:0002319!8.88e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-13,23;CL:0000337,1.45e-13,23;CL:0000540,5.03e-08,33;CL:0000047,5.03e-08,33;CL:0000031,5.03e-08,33;CL:0000404,5.03e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.80e-25!75;UBERON:0001016!8.80e-25!75;UBERON:0001017!1.58e-24!73;UBERON:0005743!1.58e-24!73;UBERON:0001049!3.04e-24!52;UBERON:0005068!3.04e-24!52;UBERON:0006241!3.04e-24!52;UBERON:0007135!3.04e-24!52;UBERON:0000033!5.04e-24!63;UBERON:0002346!5.28e-24!71;UBERON:0003075!5.28e-24!71;UBERON:0007284!5.28e-24!71;UBERON:0000955!1.38e-22!50;UBERON:0006238!1.38e-22!50;UBERON:0004121!5.92e-22!102;UBERON:0000924!5.92e-22!102;UBERON:0006601!5.92e-22!102;UBERON:0002616!7.98e-22!49;UBERON:0003056!3.85e-21!49;UBERON:0003080!1.71e-18!40;UBERON:0002780!9.04e-18!39;UBERON:0001890!9.04e-18!39;UBERON:0006240!9.04e-18!39;UBERON:0002020!1.36e-17!34;UBERON:0002791!4.33e-14!29;UBERON:0003528!4.33e-14!29;UBERON:0001893!4.33e-14!29;UBERON:0007811!6.84e-13!86;UBERON:0000153!1.16e-12!94;UBERON:0002619!4.68e-11!17;UBERON:0000956!1.18e-09!21;UBERON:0001869!1.18e-09!21;UBERON:0000203!1.18e-09!21;UBERON:0002021!2.25e-09!10;UBERON:0000411!2.25e-09!10;UBERON:0001950!2.25e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.77e-33,54;UBERON:0001049,1.39e-30,52;UBERON:0005068,1.39e-30,52;UBERON:0006241,1.39e-30,52;UBERON:0007135,1.39e-30,52;UBERON:0001017,2.61e-30,73;UBERON:0001016,3.86e-29,75;UBERON:0002346,1.53e-28,64;UBERON:0003075,1.53e-28,64;UBERON:0007284,1.53e-28,64;UBERON:0004121,6.45e-25,95;UBERON:0000924,6.45e-25,95;UBERON:0006601,6.45e-25,95;UBERON:0000955,1.47e-24,47;UBERON:0006238,1.47e-24,47;UBERON:0010371,1.76e-23,73;UBERON:0002616,2.32e-23,46;UBERON:0002020,4.28e-22,34;UBERON:0003056,4.18e-20,49;UBERON:0003080,5.61e-20,40;UBERON:0002780,7.55e-19,39;UBERON:0001890,7.55e-19,39;UBERON:0006240,7.55e-19,39;UBERON:0003528,2.48e-16,29;UBERON:0002791,2.48e-16,29;UBERON:0001893,2.48e-16,29;UBERON:0010314,4.18e-16,92;UBERON:0002021,1.35e-15,10;UBERON:0000411,1.35e-15,10;UBERON:0001950,1.35e-15,10;UBERON:0002619,2.32e-11,17;UBERON:0003076,2.68e-11,12;UBERON:0003057,2.68e-11,12;UBERON:0000956,2.85e-10,21;UBERON:0001869,2.85e-10,21;UBERON:0000203,2.85e-10,21;UBERON:0002240,7.42e-09,6;UBERON:0005174,7.42e-09,6;UBERON:0001137,7.42e-09,6;UBERON:0000025,5.41e-08,114;UBERON:0002420,1.36e-07,8;UBERON:0007245,1.36e-07,8;UBERON:0010009,1.36e-07,8;UBERON:0010011,1.36e-07,8;UBERON:0000454,1.36e-07,8;UBERON:0001948,1.43e-07,5;UBERON:0002315,1.43e-07,5;UBERON:0004111,7.85e-07,122 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0,2.87505128729943,0.167782606057736,0,0,0,0,0,3.03474691289397,4.7609188134483,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0.135005938331691,0,10.5690864229407,15.6816664075646,0.489963196859816,0.383381884072945,0.919218786610021,4.40463523997555,11.6195477657521,10.2916377281683,3.56092976871523,5.12330804173494,6.77187381723788,10.3297709630511,3.93933827022176,8.25110537994775,12.0797720044204,16.3727432918968,8.01517617048792,0.530083353332288,0.151143120213571,0,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,35.1336956413857,30.5792191947644,0,0,0,0,13.3313669070292,8.23501085073528,0.753926112677186,34.7648640384553,38.8687495142102,9.97382613885888,8.4365456795234,0,0,0,1.68353484709179,0.260240885925407,0.229902104433473,0.360124259610698,0.30140963567143,1.15662048557257,1.15302348256365,0.468508622798644,5.95017752699736,0,0,0.175951124163949,0.43839146485515,0.278047249225598,1.0447564995665,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,11.7762371195911,1.64647379806855,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,15.2523060488402,11.7211686592203,0,0,0,0.390438744296638,0.861693590931196,0,0,0,0,0,0,15.4234231882467,0,0.35613120733451,0.162886959353576,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,0,10.5536277783674,0.36012218806262,0.129358683782755,1.07168517515796,0.532020700926821,1.07021290561242,1.64549020602121,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,15.7611506708933,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0,17.5073071211291,21.6352861158373,18.3326564300607,19.4194096048367,30.8287133896789,46.0790277407717,33.7511250115903,37.3766598676103,32.6262534468627,40.385304316642,0,0.798049746802062,0.853668028770671,0.972426868273176,0.838452650511929,0.735374033800057,1.55572709461131,0.824140228955577,0.962757628775446,0.252697211763798,0.50695859978048,1.50901073108861,0.749132059759059,1.02440243847791,1.37845125493472,1.42888107384922,0.927074607558844,0.77163688185482,1.64834360321323,1.32479028120958,0.342869252385415,0.887379030796687,1.66905332963125,0.581385666529314,1.03520318456864,1.26921911837515,1.46342378298218,0.789209134313529,0.814824683075171,0.561142271657738,0.711810108745045,0.689531376628944,1.22769312950907,0.77468420592983,1.35034627686799,1.74867404556562,0.467863216890817,0.859484216193193,1.14772999241306,1.10295709559758,1.15933917810211 | |||
|short_description=p1@Car10 | |||
}} |
Revision as of 21:28, 12 September 2013
Short description: | p1@Car10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Car10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -6bp_to_ENSMUST00000042943, ENSMUST00000107859, ENSMUST00000107861_5end |
EntrezGene: | Car10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.45e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-13 | 23 |
neuron | 5.03e-08 | 33 |
neuronal stem cell | 5.03e-08 | 33 |
neuroblast | 5.03e-08 | 33 |
electrically signaling cell | 5.03e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.