FFCP PHASE1:Mm9::chr6:30755031..30755044,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=145|UniProt=|association_with_transcript=247bp_to_uc009bfw.1_5end|description=CAGE_peak_3_at_uc009bfw.1_5end|id=chr6:30755031..30755044,+|ontology_enrichment_celltype=CL:0000117!3.90e-11!23;CL:0000337!3.90e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.84e-12,23;CL:0000337,1.84e-12,23;CL:0000540,1.89e-07,33;CL:0000047,1.89e-07,33;CL:0000031,1.89e-07,33;CL:0000404,1.89e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.32e-16!34;UBERON:0001049!5.18e-16!52;UBERON:0005068!5.18e-16!52;UBERON:0006241!5.18e-16!52;UBERON:0007135!5.18e-16!52;UBERON:0000955!5.22e-15!50;UBERON:0006238!5.22e-15!50;UBERON:0002346!7.70e-15!71;UBERON:0003075!7.70e-15!71;UBERON:0007284!7.70e-15!71;UBERON:0002616!1.61e-14!49;UBERON:0001017!1.31e-13!73;UBERON:0005743!1.31e-13!73;UBERON:0000033!1.99e-13!63;UBERON:0002791!5.35e-13!29;UBERON:0003528!5.35e-13!29;UBERON:0001893!5.35e-13!29;UBERON:0000073!1.12e-12!75;UBERON:0001016!1.12e-12!75;UBERON:0003056!3.07e-12!49;UBERON:0004121!3.23e-12!102;UBERON:0000924!3.23e-12!102;UBERON:0006601!3.23e-12!102;UBERON:0003080!1.34e-11!40;UBERON:0002780!5.28e-11!39;UBERON:0001890!5.28e-11!39;UBERON:0006240!5.28e-11!39;UBERON:0000025!4.52e-10!114;UBERON:0002021!5.26e-09!10;UBERON:0000411!5.26e-09!10;UBERON:0001950!5.26e-09!10;UBERON:0000956!6.84e-08!21;UBERON:0001869!6.84e-08!21;UBERON:0000203!6.84e-08!21;UBERON:0004111!7.04e-08!122;UBERON:0007811!1.86e-07!86;UBERON:0002619!3.39e-07!17;UBERON:0002420!8.47e-07!8;UBERON:0007245!8.47e-07!8;UBERON:0010009!8.47e-07!8;UBERON:0010011!8.47e-07!8;UBERON:0000454!8.47e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.13e-28,54;UBERON:0001049,1.56e-25,52;UBERON:0005068,1.56e-25,52;UBERON:0006241,1.56e-25,52;UBERON:0007135,1.56e-25,52;UBERON:0002346,2.23e-24,64;UBERON:0003075,2.23e-24,64;UBERON:0007284,2.23e-24,64;UBERON:0002020,2.47e-24,34;UBERON:0001017,6.21e-24,73;UBERON:0001016,5.41e-23,75;UBERON:0000955,4.43e-21,47;UBERON:0006238,4.43e-21,47;UBERON:0002616,3.46e-20,46;UBERON:0003528,3.51e-20,29;UBERON:0002791,3.51e-20,29;UBERON:0001893,3.51e-20,29;UBERON:0004121,4.52e-20,95;UBERON:0000924,4.52e-20,95;UBERON:0006601,4.52e-20,95;UBERON:0010371,4.71e-20,73;UBERON:0003056,4.07e-18,49;UBERON:0003080,1.52e-17,40;UBERON:0002780,1.90e-16,39;UBERON:0001890,1.90e-16,39;UBERON:0006240,1.90e-16,39;UBERON:0002021,2.94e-16,10;UBERON:0000411,2.94e-16,10;UBERON:0001950,2.94e-16,10;UBERON:0010314,9.40e-15,92;UBERON:0002619,4.85e-12,17;UBERON:0002420,6.48e-12,8;UBERON:0007245,6.48e-12,8;UBERON:0010009,6.48e-12,8;UBERON:0010011,6.48e-12,8;UBERON:0000454,6.48e-12,8;UBERON:0000025,5.15e-11,114;UBERON:0000956,1.04e-10,21;UBERON:0001869,1.04e-10,21;UBERON:0000203,1.04e-10,21;UBERON:0004111,1.30e-09,122;UBERON:0003076,1.14e-08,12;UBERON:0003057,1.14e-08,12;UBERON:0000369,8.76e-08,5;UBERON:0002435,8.76e-08,5;UBERON:0000204,8.76e-08,5;UBERON:0010082,8.76e-08,5;UBERON:0002950,5.76e-07,4;UBERON:0001891,5.76e-07,4;UBERON:0009616,5.76e-07,4;UBERON:0010286,5.76e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,4.04632921719196,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.630974884054146,0.856952953211411,1.54607978666129,0.367472397644862,0.383381884072945,0,19.82085857989,12.5133591323484,22.8873734551803,2.37395317914349,4.7573574673253,4.68822033501084,3.62937898701795,7.31591393041184,21.5445529365302,32.4091444021034,14.6642831223076,3.16879057903011,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.587943535678524,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,1.17112318804619,1.04723353406728,0,0,0,0,4.19413790333504,4.11750542536764,5.27748278874031,2.78118912307642,3.83573185995496,2.70124457927428,4.05603157669394,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,1.05493372485001,1.02054748726992,1.7935920839879,0.187403449119458,2.58703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0.268273401399619,0.817357396570186,0.16455984991348,1.80584210487005,0.324275238183423,0,0,0.268412837520744,1.47202963994889,4.83651678182637,0,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.795825888164603,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0.203651327845314,0.581857461502877,0.911765658574141,0.316182685621286,0.442830443938806,0,0,0,0,0,0,0,0.482354319504834,0,0,1.94562272130042,0,14.3768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0.238043640886014,3.51240566144038,0.630540576424764,3.10050565508285,1.11618338060241,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0,3.85321415970701,5.74337264301796,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,1.28528526568723,0,0,0.651547837414304,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.712994756769443,0,0,0,0,0.540183282093931,0,0,0,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.328281799490123,0,11.1255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0.443068581523732,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4605700194485,13.8097570952153,21.7700295106971,11.3423100346834,4.7955776383945,16.6186657425734,6.75022500231806,10.8077088773813,16.7662691324156,13.9795284172991,0,1.19707462020309,0.170733605754134,0.486213434136588,0,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,1.21733959710847,0.640251524048693,0.459483751644906,1.42888107384922,1.0429589335037,1.35036454324594,1.64834360321323,0.883193520806384,1.37147700954166,0.887379030796687,0.238436189947321,1.16277133305863,0.564656282491984,0.507687647350059,1.64635175585495,2.10455769150274,0.950628796921032,0.561142271657738,1.18635018124174,2.1670986122624,3.27384834535751,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843|short_description=p3@uc009bfw.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|UniProt= | |||
|association_with_transcript=247bp_to_uc009bfw.1_5end | |||
|description=CAGE_peak_3_at_uc009bfw.1_5end | |||
|id=chr6:30755031..30755044,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.90e-11!23;CL:0000337!3.90e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.84e-12,23;CL:0000337,1.84e-12,23;CL:0000540,1.89e-07,33;CL:0000047,1.89e-07,33;CL:0000031,1.89e-07,33;CL:0000404,1.89e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.32e-16!34;UBERON:0001049!5.18e-16!52;UBERON:0005068!5.18e-16!52;UBERON:0006241!5.18e-16!52;UBERON:0007135!5.18e-16!52;UBERON:0000955!5.22e-15!50;UBERON:0006238!5.22e-15!50;UBERON:0002346!7.70e-15!71;UBERON:0003075!7.70e-15!71;UBERON:0007284!7.70e-15!71;UBERON:0002616!1.61e-14!49;UBERON:0001017!1.31e-13!73;UBERON:0005743!1.31e-13!73;UBERON:0000033!1.99e-13!63;UBERON:0002791!5.35e-13!29;UBERON:0003528!5.35e-13!29;UBERON:0001893!5.35e-13!29;UBERON:0000073!1.12e-12!75;UBERON:0001016!1.12e-12!75;UBERON:0003056!3.07e-12!49;UBERON:0004121!3.23e-12!102;UBERON:0000924!3.23e-12!102;UBERON:0006601!3.23e-12!102;UBERON:0003080!1.34e-11!40;UBERON:0002780!5.28e-11!39;UBERON:0001890!5.28e-11!39;UBERON:0006240!5.28e-11!39;UBERON:0000025!4.52e-10!114;UBERON:0002021!5.26e-09!10;UBERON:0000411!5.26e-09!10;UBERON:0001950!5.26e-09!10;UBERON:0000956!6.84e-08!21;UBERON:0001869!6.84e-08!21;UBERON:0000203!6.84e-08!21;UBERON:0004111!7.04e-08!122;UBERON:0007811!1.86e-07!86;UBERON:0002619!3.39e-07!17;UBERON:0002420!8.47e-07!8;UBERON:0007245!8.47e-07!8;UBERON:0010009!8.47e-07!8;UBERON:0010011!8.47e-07!8;UBERON:0000454!8.47e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.13e-28,54;UBERON:0001049,1.56e-25,52;UBERON:0005068,1.56e-25,52;UBERON:0006241,1.56e-25,52;UBERON:0007135,1.56e-25,52;UBERON:0002346,2.23e-24,64;UBERON:0003075,2.23e-24,64;UBERON:0007284,2.23e-24,64;UBERON:0002020,2.47e-24,34;UBERON:0001017,6.21e-24,73;UBERON:0001016,5.41e-23,75;UBERON:0000955,4.43e-21,47;UBERON:0006238,4.43e-21,47;UBERON:0002616,3.46e-20,46;UBERON:0003528,3.51e-20,29;UBERON:0002791,3.51e-20,29;UBERON:0001893,3.51e-20,29;UBERON:0004121,4.52e-20,95;UBERON:0000924,4.52e-20,95;UBERON:0006601,4.52e-20,95;UBERON:0010371,4.71e-20,73;UBERON:0003056,4.07e-18,49;UBERON:0003080,1.52e-17,40;UBERON:0002780,1.90e-16,39;UBERON:0001890,1.90e-16,39;UBERON:0006240,1.90e-16,39;UBERON:0002021,2.94e-16,10;UBERON:0000411,2.94e-16,10;UBERON:0001950,2.94e-16,10;UBERON:0010314,9.40e-15,92;UBERON:0002619,4.85e-12,17;UBERON:0002420,6.48e-12,8;UBERON:0007245,6.48e-12,8;UBERON:0010009,6.48e-12,8;UBERON:0010011,6.48e-12,8;UBERON:0000454,6.48e-12,8;UBERON:0000025,5.15e-11,114;UBERON:0000956,1.04e-10,21;UBERON:0001869,1.04e-10,21;UBERON:0000203,1.04e-10,21;UBERON:0004111,1.30e-09,122;UBERON:0003076,1.14e-08,12;UBERON:0003057,1.14e-08,12;UBERON:0000369,8.76e-08,5;UBERON:0002435,8.76e-08,5;UBERON:0000204,8.76e-08,5;UBERON:0010082,8.76e-08,5;UBERON:0002950,5.76e-07,4;UBERON:0001891,5.76e-07,4;UBERON:0009616,5.76e-07,4;UBERON:0010286,5.76e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,4.04632921719196,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.630974884054146,0.856952953211411,1.54607978666129,0.367472397644862,0.383381884072945,0,19.82085857989,12.5133591323484,22.8873734551803,2.37395317914349,4.7573574673253,4.68822033501084,3.62937898701795,7.31591393041184,21.5445529365302,32.4091444021034,14.6642831223076,3.16879057903011,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.587943535678524,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,1.17112318804619,1.04723353406728,0,0,0,0,4.19413790333504,4.11750542536764,5.27748278874031,2.78118912307642,3.83573185995496,2.70124457927428,4.05603157669394,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,1.05493372485001,1.02054748726992,1.7935920839879,0.187403449119458,2.58703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0.268273401399619,0.817357396570186,0.16455984991348,1.80584210487005,0.324275238183423,0,0,0.268412837520744,1.47202963994889,4.83651678182637,0,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.795825888164603,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0.203651327845314,0.581857461502877,0.911765658574141,0.316182685621286,0.442830443938806,0,0,0,0,0,0,0,0.482354319504834,0,0,1.94562272130042,0,14.3768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0.238043640886014,3.51240566144038,0.630540576424764,3.10050565508285,1.11618338060241,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0,3.85321415970701,5.74337264301796,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,1.28528526568723,0,0,0.651547837414304,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.712994756769443,0,0,0,0,0.540183282093931,0,0,0,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.328281799490123,0,11.1255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0.443068581523732,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4605700194485,13.8097570952153,21.7700295106971,11.3423100346834,4.7955776383945,16.6186657425734,6.75022500231806,10.8077088773813,16.7662691324156,13.9795284172991,0,1.19707462020309,0.170733605754134,0.486213434136588,0,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,1.21733959710847,0.640251524048693,0.459483751644906,1.42888107384922,1.0429589335037,1.35036454324594,1.64834360321323,0.883193520806384,1.37147700954166,0.887379030796687,0.238436189947321,1.16277133305863,0.564656282491984,0.507687647350059,1.64635175585495,2.10455769150274,0.950628796921032,0.561142271657738,1.18635018124174,2.1670986122624,3.27384834535751,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843 | |||
|short_description=p3@uc009bfw.1 | |||
}} |
Revision as of 09:37, 14 September 2013
Short description: | p3@uc009bfw.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_uc009bfw.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | 247bp_to_uc009bfw.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.84e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.84e-12 | 23 |
neuron | 1.89e-07 | 33 |
neuronal stem cell | 1.89e-07 | 33 |
neuroblast | 1.89e-07 | 33 |
electrically signaling cell | 1.89e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.